python3-pysam (0.20.0+ds-3+b1)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-bookworm
- Repository
- https://deb.debian.org/debian
- Codename
- bookworm
- Component
- main
- Source
- python-pysam (0.20.0+ds-3)
- Architecture
- amd64
- Section
- python
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 5.8 kB
- Size expected
- 1.7 MB
- Size actual
- 1.7 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
interface for the SAM/BAM sequence alignment and mapping format (Python 3)
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 876bb17d…d7ddcd54 | |
| SHA-1 | dd819116…ca15c95e | |
| SHA-256 | 79fc87c7…f6f623c6 | |
| SHA-512 | 6ea2fbba…42b6932d |
Contents
Files and directories included
. usr usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/pysam usr/lib/python3/dist-packages/pysam/Pileup.py usr/lib/python3/dist-packages/pysam/__init__.py usr/lib/python3/dist-packages/pysam/bcftools.py usr/lib/python3/dist-packages/pysam/cbcftools_util.h usr/lib/python3/dist-packages/pysam/config.py usr/lib/python3/dist-packages/pysam/csamtools_util.h usr/lib/python3/dist-packages/pysam/htslib_util.h usr/lib/python3/dist-packages/pysam/include usr/lib/python3/dist-packages/pysam/include/__init__.py usr/lib/python3/dist-packages/pysam/include/bcftools usr/lib/python3/dist-packages/pysam/include/bcftools/HMM.h usr/lib/python3/dist-packages/pysam/include/bcftools/abuf.h usr/lib/python3/dist-packages/pysam/include/bcftools/bam2bcf.h usr/lib/python3/dist-packages/pysam/include/bcftools/bam_sample.h usr/lib/python3/dist-packages/pysam/include/bcftools/bcftools.h usr/lib/python3/dist-packages/pysam/include/bcftools/bcftools.pysam.h usr/lib/python3/dist-packages/pysam/include/bcftools/bin.h usr/lib/python3/dist-packages/pysam/include/bcftools/call.h usr/lib/python3/dist-packages/pysam/include/bcftools/cols.h usr/lib/python3/dist-packages/pysam/include/bcftools/config.h usr/lib/python3/dist-packages/pysam/include/bcftools/convert.h usr/lib/python3/dist-packages/pysam/include/bcftools/dbuf.h usr/lib/python3/dist-packages/pysam/include/bcftools/dist.h usr/lib/python3/dist-packages/pysam/include/bcftools/extsort.h usr/lib/python3/dist-packages/pysam/include/bcftools/filter.h usr/lib/python3/dist-packages/pysam/include/bcftools/gvcf.h usr/lib/python3/dist-packages/pysam/include/bcftools/hclust.h usr/lib/python3/dist-packages/pysam/include/bcftools/hex.h usr/lib/python3/dist-packages/pysam/include/bcftools/khash_str2str.h usr/lib/python3/dist-packages/pysam/include/bcftools/kheap.h usr/lib/python3/dist-packages/pysam/include/bcftools/kmin.h usr/lib/python3/dist-packages/pysam/include/bcftools/mw.h usr/lib/python3/dist-packages/pysam/include/bcftools/ploidy.h usr/lib/python3/dist-packages/pysam/include/bcftools/prob1.h usr/lib/python3/dist-packages/pysam/include/bcftools/rbuf.h usr/lib/python3/dist-packages/pysam/include/bcftools/regidx.h usr/lib/python3/dist-packages/pysam/include/bcftools/smpl_ilist.h usr/lib/python3/dist-packages/pysam/include/bcftools/str_finder.h usr/lib/python3/dist-packages/pysam/include/bcftools/tsv2vcf.h usr/lib/python3/dist-packages/pysam/include/bcftools/utlist.h usr/lib/python3/dist-packages/pysam/include/bcftools/variantkey.h usr/lib/python3/dist-packages/pysam/include/bcftools/vcfbuf.h usr/lib/python3/dist-packages/pysam/include/bcftools/vcmp.h usr/lib/python3/dist-packages/pysam/include/samtools usr/lib/python3/dist-packages/pysam/include/samtools/bam.h usr/lib/python3/dist-packages/pysam/include/samtools/bam_ampliconclip.h usr/lib/python3/dist-packages/pysam/include/samtools/bam_lpileup.h usr/lib/python3/dist-packages/pysam/include/samtools/bam_plbuf.h usr/lib/python3/dist-packages/pysam/include/samtools/bedidx.h usr/lib/python3/dist-packages/pysam/include/samtools/config.h usr/lib/python3/dist-packages/pysam/include/samtools/consensus_pileup.h usr/lib/python3/dist-packages/pysam/include/samtools/sam_opts.h usr/lib/python3/dist-packages/pysam/include/samtools/sample.h usr/lib/python3/dist-packages/pysam/include/samtools/samtools.h usr/lib/python3/dist-packages/pysam/include/samtools/samtools.pysam.h usr/lib/python3/dist-packages/pysam/include/samtools/samtools_config_vars.h usr/lib/python3/dist-packages/pysam/include/samtools/splaysort.h usr/lib/python3/dist-packages/pysam/include/samtools/stats_isize.h usr/lib/python3/dist-packages/pysam/include/samtools/tmp_file.h usr/lib/python3/dist-packages/pysam/libcalignedsegment.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcalignedsegment.pxd usr/lib/python3/dist-packages/pysam/libcalignedsegment.pyi usr/lib/python3/dist-packages/pysam/libcalignmentfile.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcalignmentfile.pxd usr/lib/python3/dist-packages/pysam/libcalignmentfile.pyi usr/lib/python3/dist-packages/pysam/libcbcf.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcbcf.pxd usr/lib/python3/dist-packages/pysam/libcbcf.pyi usr/lib/python3/dist-packages/pysam/libcbcftools.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcbcftools.pxd usr/lib/python3/dist-packages/pysam/libcbcftools.pyi usr/lib/python3/dist-packages/pysam/libcbgzf.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcbgzf.pyi usr/lib/python3/dist-packages/pysam/libcfaidx.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcfaidx.pxd usr/lib/python3/dist-packages/pysam/libcfaidx.pyi usr/lib/python3/dist-packages/pysam/libchtslib.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libchtslib.pxd usr/lib/python3/dist-packages/pysam/libchtslib.pyi usr/lib/python3/dist-packages/pysam/libcsamfile.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcsamfile.pxd usr/lib/python3/dist-packages/pysam/libcsamfile.pyi usr/lib/python3/dist-packages/pysam/libcsamtools.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcsamtools.pxd usr/lib/python3/dist-packages/pysam/libcsamtools.pyi usr/lib/python3/dist-packages/pysam/libctabix.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libctabix.pxd usr/lib/python3/dist-packages/pysam/libctabix.pyi usr/lib/python3/dist-packages/pysam/libctabixproxies.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libctabixproxies.pxd usr/lib/python3/dist-packages/pysam/libctabixproxies.pyi usr/lib/python3/dist-packages/pysam/libcutils.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcutils.pxd usr/lib/python3/dist-packages/pysam/libcutils.pyi usr/lib/python3/dist-packages/pysam/libcvcf.cpython-311-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pysam/libcvcf.pxd usr/lib/python3/dist-packages/pysam/libcvcf.pyi usr/lib/python3/dist-packages/pysam/py.typed usr/lib/python3/dist-packages/pysam/pysam_stream.h usr/lib/python3/dist-packages/pysam/pysam_util.h usr/lib/python3/dist-packages/pysam/samtools.py usr/lib/python3/dist-packages/pysam/utils.py usr/lib/python3/dist-packages/pysam/version.h usr/lib/python3/dist-packages/pysam/version.py usr/lib/python3/dist-packages/pysam/version.pyi usr/lib/python3/dist-packages/pysam-0.20.0.egg-info usr/lib/python3/dist-packages/pysam-0.20.0.egg-info/PKG-INFO usr/lib/python3/dist-packages/pysam-0.20.0.egg-info/dependency_links.txt usr/lib/python3/dist-packages/pysam-0.20.0.egg-info/not-zip-safe usr/lib/python3/dist-packages/pysam-0.20.0.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/python3-pysam usr/share/doc/python3-pysam/changelog.Debian.amd64.gz usr/share/doc/python3-pysam/changelog.Debian.gz usr/share/doc/python3-pysam/copyright usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/python3-pysam