r-bioc-scrnaseq (2.12.0+ds-1)

Details

Core information at a glance

Distribution
debian
Origin
debian-bookworm
Repository
https://deb.debian.org/debian
Codename
bookworm
Component
main
Source
none
Architecture
mipsel
Section
gnu-r
Priority
optional
Maintainer
Debian R Packages Maintainers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
720 B
Size expected
285.7 kB
Size actual
285.7 kB
Size match

Dependencies

Required package dependencies

  • r-base-core (>= 4.2.2.20221110-1)
  • r-api-4.0
  • r-api-bioc-3.16
  • r-bioc-singlecellexperiment
  • r-bioc-biocgenerics
  • r-bioc-s4vectors
  • r-bioc-genomicranges
  • r-bioc-summarizedexperiment
  • r-bioc-experimenthub (>= 2.3.4)
  • r-bioc-annotationhub (>= 3.3.6)
  • r-bioc-annotationdbi
  • r-bioc-ensembldb
  • r-bioc-genomicfeatures

Suggested packages

Recommended additional packages

  • r-bioc-biocstyle
  • r-cran-knitr
  • r-cran-rmarkdown
  • r-bioc-biocfilecache
  • r-cran-testthat
  • r-cran-rappdirs

Description

Collection of Public Single-Cell RNA-Seq Datasets

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5bb5dcf31…dfdf22ad
SHA-112127c27…141efa78
SHA-25664ea9807…f6e2478a
SHA-5127dc2a695…a393b4c2

Contents

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/scRNAseq
usr/lib/R/site-library/scRNAseq/DESCRIPTION
usr/lib/R/site-library/scRNAseq/INDEX
usr/lib/R/site-library/scRNAseq/Meta
usr/lib/R/site-library/scRNAseq/Meta/Rd.rds
usr/lib/R/site-library/scRNAseq/Meta/features.rds
usr/lib/R/site-library/scRNAseq/Meta/hsearch.rds
usr/lib/R/site-library/scRNAseq/Meta/links.rds
usr/lib/R/site-library/scRNAseq/Meta/nsInfo.rds
usr/lib/R/site-library/scRNAseq/Meta/package.rds
usr/lib/R/site-library/scRNAseq/Meta/vignette.rds
usr/lib/R/site-library/scRNAseq/NAMESPACE
usr/lib/R/site-library/scRNAseq/NEWS.Rd
usr/lib/R/site-library/scRNAseq/R
usr/lib/R/site-library/scRNAseq/R/scRNAseq
usr/lib/R/site-library/scRNAseq/R/scRNAseq.rdb
usr/lib/R/site-library/scRNAseq/R/scRNAseq.rdx
usr/lib/R/site-library/scRNAseq/doc
usr/lib/R/site-library/scRNAseq/doc/index.html
usr/lib/R/site-library/scRNAseq/doc/scRNAseq.R
usr/lib/R/site-library/scRNAseq/doc/scRNAseq.Rmd
usr/lib/R/site-library/scRNAseq/extdata
usr/lib/R/site-library/scRNAseq/extdata/2.0.0
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-aztekin-tail.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-bach-mammary.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-baron-pancreas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-buettner-esc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-campbell-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-chen-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-grun-hsc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-grun-pancreas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-kolodziejczyk-esc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-lamanno-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-lawlor-pancreas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-legacy.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-leng-esc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-lun-spikein.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-macosko-retina.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-marques-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-messmer-esc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-muraro-pancreas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-nestorowa-hsc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-richard-tcell.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-romanov-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-segerstolpe-pancreas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-shekhar-retina.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-tasic-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-usoskin-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-xin-pancreas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.0.0/metadata-zeisel-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.2.0
usr/lib/R/site-library/scRNAseq/extdata/2.2.0/metadata-ercc-concentrations.csv
usr/lib/R/site-library/scRNAseq/extdata/2.2.0/metadata-paul-hsc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-hermann-spermatogenesis.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-hu-cortex.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-kotliarov-pbmc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-mair-pbmc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-stoeckius-hashing.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-wu-kidney.csv
usr/lib/R/site-library/scRNAseq/extdata/2.4.0/metadata-zilionis-lung.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-bacher-tcell.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-bhaduri-organoid.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-bunis-hspc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-darmanis-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-ernst-spermatogenesis.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-fletcher-olfactory.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-giladi-hsc.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-he-organ-atlas.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-jessa-brain.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-nowakowski-cortex.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-pollen-glia.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-zeisel-nervous.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-zhao-immune-liver.csv
usr/lib/R/site-library/scRNAseq/extdata/2.6.0/metadata-zhong-prefrontal.csv
usr/lib/R/site-library/scRNAseq/extdata/2.8.0
usr/lib/R/site-library/scRNAseq/extdata/2.8.0/metadata-ledergor-myeloma.csv
usr/lib/R/site-library/scRNAseq/extdata/manifest.csv
usr/lib/R/site-library/scRNAseq/help
usr/lib/R/site-library/scRNAseq/help/AnIndex
usr/lib/R/site-library/scRNAseq/help/aliases.rds
usr/lib/R/site-library/scRNAseq/help/paths.rds
usr/lib/R/site-library/scRNAseq/help/scRNAseq.rdb
usr/lib/R/site-library/scRNAseq/help/scRNAseq.rdx
usr/lib/R/site-library/scRNAseq/html
usr/lib/R/site-library/scRNAseq/html/00Index.html
usr/lib/R/site-library/scRNAseq/html/R.css
usr/lib/R/site-library/scRNAseq/scripts
usr/lib/R/site-library/scRNAseq/scripts/2.0.0
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-aztekin-tail-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-aztekin-tail-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-bach-mammary-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-bach-mammary-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-baron-pancreas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-baron-pancreas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-buettner-esc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-buettner-esc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-campbell-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-campbell-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-chen-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-chen-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-grun-hsc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-grun-hsc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-grun-pancreas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-grun-pancreas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-kolodziejczyk-esc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-kolodziejczyk-esc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-lamanno-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-lamanno-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-lawlor-pancreas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-lawlor-pancreas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-legacy-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-legacy-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-leng-esc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-leng-esc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-lun-spikein-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-lun-spikein-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-macosko-retina-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-macosko-retina-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-marques-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-marques-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-messmer-esc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-messmer-esc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-muraro-pancreas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-muraro-pancreas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-nestorowa-hsc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-nestorowa-hsc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-richard-tcell-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-richard-tcell-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-romanov-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-romanov-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-segerstolpe-pancreas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-segerstolpe-pancreas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-shekhar-retina-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-shekhar-retina-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-tasic-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-tasic-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-usoskin-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-usoskin-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-xin-pancreas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-xin-pancreas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-zeisel-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.0.0/make-zeisel-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.2.0
usr/lib/R/site-library/scRNAseq/scripts/2.2.0/make-ercc-concentrations-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.2.0/make-paul-hsc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.2.0/make-paul-hsc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-hermann-spermatogenesis-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-hermann-spermatogenesis-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-hu-cortex-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-hu-cortex-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-kotliarov-pbmc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-kotliarov-pbmc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-mair-pbmc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-mair-pbmc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-stoeckius-hashing-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-stoeckius-hashing-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-wu-kidney-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-wu-kidney-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-zilionis-lung-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.4.0/make-zilionis-lung-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-bacher-tcell-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-bacher-tcell-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-bhaduri-organoid-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-bhaduri-organoid-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-bunis-hspc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-bunis-hspc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-darmanis-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-darmanis-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-ernst-spermatogenesis-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-ernst-spermatogenesis-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-fletcher-olfactory-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-fletcher-olfactory-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-giladi-hsc-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-giladi-hsc-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-he-organ-atlas-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-he-organ-atlas-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-jessa-brain-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-jessa-brain-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-nowakowski-cortex-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-nowakowski-cortex-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-pollen-glia-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-pollen-glia-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-zeisel-nervous-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-zeisel-nervous-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-zhao-immune-liver-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-zhao-immune-liver-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-zhong-prefrontal-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.6.0/make-zhong-prefrontal-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/2.8.0
usr/lib/R/site-library/scRNAseq/scripts/2.8.0/make-ledergor-myeloma-data.Rmd
usr/lib/R/site-library/scRNAseq/scripts/2.8.0/make-ledergor-myeloma-metadata.R
usr/lib/R/site-library/scRNAseq/scripts/ref.bib
usr/share
usr/share/doc
usr/share/doc/r-bioc-scrnaseq
usr/share/doc/r-bioc-scrnaseq/changelog.Debian.gz
usr/share/doc/r-bioc-scrnaseq/copyright