python3-cyvcf2 (0.30.4-4)

Details

Core information at a glance

Distribution
debian
Origin
debian-bullseye
Repository
https://deb.debian.org/debian
Codename
bullseye
Component
main
Source
cyvcf2
Architecture
i386
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
4.8 kB
Size expected
806.4 kB
Size actual
806.4 kB
Size match

Dependencies

Required package dependencies

  • python3-numpy (>= 1:1.16.0~rc1)
  • python3-numpy-abi9
  • python3 (<< 3.10)
  • python3 (>= 3.9~)
  • python3-click
  • python3-coloredlogs
  • python3:any
  • libc6 (>= 2.7)
  • libhts3 (>= 1.10)

Suggested packages

Recommended additional packages

  • None

Description

VCF parser based on htslib (Python 3)

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD58c22ba5d…c18dad0c
SHA-1f58228cf…39c01f9b
SHA-2565b898194…225a876b
SHA-512b418912f…c0e5012f

Contents

Files and directories included

.
usr
usr/bin
usr/bin/cyvcf2
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/cyvcf2
usr/lib/python3/dist-packages/cyvcf2/__init__.py
usr/lib/python3/dist-packages/cyvcf2/__main__.py
usr/lib/python3/dist-packages/cyvcf2/cli.py
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.c
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.cpython-39-i386-linux-gnu.so
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.pxd
usr/lib/python3/dist-packages/cyvcf2/cyvcf2.pyx
usr/lib/python3/dist-packages/cyvcf2/helpers.c
usr/lib/python3/dist-packages/cyvcf2/helpers.h
usr/lib/python3/dist-packages/cyvcf2/relatedness.h
usr/lib/python3/dist-packages/cyvcf2/tests
usr/lib/python3/dist-packages/cyvcf2/tests/__init__.py
usr/lib/python3/dist-packages/cyvcf2/tests/bug.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/decomposed.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/empty.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/issue_44.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/no-seq-len.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/no-seq-names.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/o.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/seg.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test-alt-repr.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-diff.csi
usr/lib/python3/dist-packages/cyvcf2/tests/test-format-string.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-haploidX.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-hemi.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-invalid-header.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/test.bug.117.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.comp_het.3.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.snpeff.bcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.snpeff.bcf.csi
usr/lib/python3/dist-packages/cyvcf2/tests/test.snpeff.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test.vcf.gz.tbi
usr/lib/python3/dist-packages/cyvcf2/tests/test_cli.py
usr/lib/python3/dist-packages/cyvcf2/tests/test_gt_alt_freqs.vcf
usr/lib/python3/dist-packages/cyvcf2/tests/test_gt_bases.vcf.gz
usr/lib/python3/dist-packages/cyvcf2/tests/test_hemi.py
usr/lib/python3/dist-packages/cyvcf2/tests/test_reader.py
usr/lib/python3/dist-packages/cyvcf2/tests/test_writer.py
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info/PKG-INFO
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info/entry_points.txt
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info/not-zip-safe
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info/requires.txt
usr/lib/python3/dist-packages/cyvcf2-0.30.4.egg-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/python3-cyvcf2
usr/share/doc/python3-cyvcf2/changelog.Debian.gz
usr/share/doc/python3-cyvcf2/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/cyvcf2.1.gz