r-bioc-rhtslib (1.22.0+dfsg-1)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-bullseye
- Repository
- https://deb.debian.org/debian
- Codename
- bullseye
- Component
- main
- Source
- none
- Architecture
- i386
- Section
- gnu-r
- Priority
- optional
- Maintainer
- Debian R Packages Maintainers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 6.9 kB
- Size expected
- 1.1 MB
- Size actual
- 1.1 MB
- Size match
Dependencies
Required package dependencies
Description
HTSlib high-throughput sequencing library as GNU R package
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 35ee715a…a3e52d40 | |
| SHA-1 | c5954c0f…032cf78d | |
| SHA-256 | d011b315…12860746 | |
| SHA-512 | 5355f824…87ddf55d |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/Rhtslib usr/lib/R/site-library/Rhtslib/DESCRIPTION usr/lib/R/site-library/Rhtslib/INDEX usr/lib/R/site-library/Rhtslib/Meta usr/lib/R/site-library/Rhtslib/Meta/Rd.rds usr/lib/R/site-library/Rhtslib/Meta/features.rds usr/lib/R/site-library/Rhtslib/Meta/hsearch.rds usr/lib/R/site-library/Rhtslib/Meta/links.rds usr/lib/R/site-library/Rhtslib/Meta/nsInfo.rds usr/lib/R/site-library/Rhtslib/Meta/package.rds usr/lib/R/site-library/Rhtslib/Meta/vignette.rds usr/lib/R/site-library/Rhtslib/NAMESPACE usr/lib/R/site-library/Rhtslib/NEWS usr/lib/R/site-library/Rhtslib/R usr/lib/R/site-library/Rhtslib/R/Rhtslib usr/lib/R/site-library/Rhtslib/R/Rhtslib.rdb usr/lib/R/site-library/Rhtslib/R/Rhtslib.rdx usr/lib/R/site-library/Rhtslib/doc usr/lib/R/site-library/Rhtslib/doc/Rhtslib.R usr/lib/R/site-library/Rhtslib/doc/Rhtslib.Rmd usr/lib/R/site-library/Rhtslib/doc/index.html usr/lib/R/site-library/Rhtslib/help usr/lib/R/site-library/Rhtslib/help/AnIndex usr/lib/R/site-library/Rhtslib/help/Rhtslib.rdb usr/lib/R/site-library/Rhtslib/help/Rhtslib.rdx usr/lib/R/site-library/Rhtslib/help/aliases.rds usr/lib/R/site-library/Rhtslib/help/paths.rds usr/lib/R/site-library/Rhtslib/html usr/lib/R/site-library/Rhtslib/html/00Index.html usr/lib/R/site-library/Rhtslib/html/R.css usr/lib/R/site-library/Rhtslib/include usr/lib/R/site-library/Rhtslib/include/README usr/lib/R/site-library/Rhtslib/include/bam.c usr/lib/R/site-library/Rhtslib/include/bam.h usr/lib/R/site-library/Rhtslib/include/bam_aux.c usr/lib/R/site-library/Rhtslib/include/bam_cat.c usr/lib/R/site-library/Rhtslib/include/bam_endian.h usr/lib/R/site-library/Rhtslib/include/bam_plbuf.c usr/lib/R/site-library/Rhtslib/include/bam_plbuf.h usr/lib/R/site-library/Rhtslib/include/bam_sort.c usr/lib/R/site-library/Rhtslib/include/hts_internal.h usr/lib/R/site-library/Rhtslib/include/htslib usr/lib/R/site-library/Rhtslib/include/htslib/bgzf.h usr/lib/R/site-library/Rhtslib/include/htslib/cram.h usr/lib/R/site-library/Rhtslib/include/htslib/faidx.h usr/lib/R/site-library/Rhtslib/include/htslib/hfile.h usr/lib/R/site-library/Rhtslib/include/htslib/hts.h usr/lib/R/site-library/Rhtslib/include/htslib/hts_defs.h usr/lib/R/site-library/Rhtslib/include/htslib/hts_endian.h usr/lib/R/site-library/Rhtslib/include/htslib/hts_log.h usr/lib/R/site-library/Rhtslib/include/htslib/hts_os.h usr/lib/R/site-library/Rhtslib/include/htslib/kbitset.h usr/lib/R/site-library/Rhtslib/include/htslib/kfunc.h usr/lib/R/site-library/Rhtslib/include/htslib/khash.h usr/lib/R/site-library/Rhtslib/include/htslib/khash_str2int.h usr/lib/R/site-library/Rhtslib/include/htslib/klist.h usr/lib/R/site-library/Rhtslib/include/htslib/knetfile.h usr/lib/R/site-library/Rhtslib/include/htslib/kseq.h usr/lib/R/site-library/Rhtslib/include/htslib/ksort.h usr/lib/R/site-library/Rhtslib/include/htslib/kstring.h usr/lib/R/site-library/Rhtslib/include/htslib/regidx.h usr/lib/R/site-library/Rhtslib/include/htslib/sam.h usr/lib/R/site-library/Rhtslib/include/htslib/synced_bcf_reader.h usr/lib/R/site-library/Rhtslib/include/htslib/tbx.h usr/lib/R/site-library/Rhtslib/include/htslib/thread_pool.h usr/lib/R/site-library/Rhtslib/include/htslib/vcf.h usr/lib/R/site-library/Rhtslib/include/htslib/vcf_sweep.h usr/lib/R/site-library/Rhtslib/include/htslib/vcfutils.h usr/lib/R/site-library/Rhtslib/include/sam.c usr/lib/R/site-library/Rhtslib/include/sam.h usr/lib/R/site-library/Rhtslib/include/sam_header.h usr/lib/R/site-library/Rhtslib/include/sam_opts.c usr/lib/R/site-library/Rhtslib/include/sam_opts.h usr/lib/R/site-library/Rhtslib/include/sam_utils.c usr/lib/R/site-library/Rhtslib/include/samtools.h usr/lib/R/site-library/Rhtslib/include/textutils_internal.h usr/lib/R/site-library/Rhtslib/include/version.h usr/lib/R/site-library/Rhtslib/libs usr/lib/R/site-library/Rhtslib/libs/Rhtslib.so usr/lib/R/site-library/Rhtslib/testdata usr/lib/R/site-library/Rhtslib/testdata/auxf#values.sam usr/lib/R/site-library/Rhtslib/testdata/auxf#values_java.cram usr/lib/R/site-library/Rhtslib/testdata/auxf.fa usr/lib/R/site-library/Rhtslib/testdata/auxf.fa.fai usr/lib/R/site-library/Rhtslib/testdata/c1#bounds.sam usr/lib/R/site-library/Rhtslib/testdata/c1#clip.sam usr/lib/R/site-library/Rhtslib/testdata/c1#noseq.sam usr/lib/R/site-library/Rhtslib/testdata/c1#pad1.sam usr/lib/R/site-library/Rhtslib/testdata/c1#pad2.sam usr/lib/R/site-library/Rhtslib/testdata/c1#pad3.sam usr/lib/R/site-library/Rhtslib/testdata/c1#unknown.sam usr/lib/R/site-library/Rhtslib/testdata/c1.fa usr/lib/R/site-library/Rhtslib/testdata/c1.fa.fai usr/lib/R/site-library/Rhtslib/testdata/c2#pad.sam usr/lib/R/site-library/Rhtslib/testdata/c2.fa usr/lib/R/site-library/Rhtslib/testdata/c2.fa.fai usr/lib/R/site-library/Rhtslib/testdata/ce#1.sam usr/lib/R/site-library/Rhtslib/testdata/ce#2.sam usr/lib/R/site-library/Rhtslib/testdata/ce#5.sam usr/lib/R/site-library/Rhtslib/testdata/ce#5b.sam usr/lib/R/site-library/Rhtslib/testdata/ce#5b_java.cram usr/lib/R/site-library/Rhtslib/testdata/ce#large_seq.sam usr/lib/R/site-library/Rhtslib/testdata/ce#supp.sam usr/lib/R/site-library/Rhtslib/testdata/ce#tag_depadded.sam usr/lib/R/site-library/Rhtslib/testdata/ce#tag_padded.sam usr/lib/R/site-library/Rhtslib/testdata/ce#unmap.sam usr/lib/R/site-library/Rhtslib/testdata/ce#unmap1.sam usr/lib/R/site-library/Rhtslib/testdata/ce#unmap2.sam usr/lib/R/site-library/Rhtslib/testdata/ce.fa usr/lib/R/site-library/Rhtslib/testdata/ce.fa.fai usr/lib/R/site-library/Rhtslib/testdata/faidx.fa usr/lib/R/site-library/Rhtslib/testdata/fieldarith.sam usr/lib/R/site-library/Rhtslib/testdata/formatcols.vcf usr/lib/R/site-library/Rhtslib/testdata/formatmissing-out.vcf usr/lib/R/site-library/Rhtslib/testdata/formatmissing.vcf usr/lib/R/site-library/Rhtslib/testdata/md#1.sam usr/lib/R/site-library/Rhtslib/testdata/md.fa usr/lib/R/site-library/Rhtslib/testdata/md.fa.fai usr/lib/R/site-library/Rhtslib/testdata/noroundtrip-out.vcf usr/lib/R/site-library/Rhtslib/testdata/noroundtrip.vcf usr/lib/R/site-library/Rhtslib/testdata/tabix usr/lib/R/site-library/Rhtslib/testdata/tabix/bed_file.bed usr/lib/R/site-library/Rhtslib/testdata/tabix/gff_file.gff usr/lib/R/site-library/Rhtslib/testdata/tabix/large_chr.vcf usr/lib/R/site-library/Rhtslib/testdata/tabix/vcf_file.vcf usr/lib/R/site-library/Rhtslib/testdata/test-vcf-hdr-in.vcf usr/lib/R/site-library/Rhtslib/testdata/xx#blank.sam usr/lib/R/site-library/Rhtslib/testdata/xx#large_aux.sam usr/lib/R/site-library/Rhtslib/testdata/xx#large_aux2.sam usr/lib/R/site-library/Rhtslib/testdata/xx#large_aux_java.cram usr/lib/R/site-library/Rhtslib/testdata/xx#minimal.sam usr/lib/R/site-library/Rhtslib/testdata/xx#pair.sam usr/lib/R/site-library/Rhtslib/testdata/xx#repeated.sam usr/lib/R/site-library/Rhtslib/testdata/xx#rg.sam usr/lib/R/site-library/Rhtslib/testdata/xx#tlen.sam usr/lib/R/site-library/Rhtslib/testdata/xx#tlen2.sam usr/lib/R/site-library/Rhtslib/testdata/xx#triplet.sam usr/lib/R/site-library/Rhtslib/testdata/xx#unsorted.sam usr/lib/R/site-library/Rhtslib/testdata/xx.fa usr/lib/R/site-library/Rhtslib/testdata/xx.fa.fai usr/lib/R/site-library/Rhtslib/usrlib usr/lib/R/site-library/Rhtslib/usrlib/libhts.a usr/lib/R/site-library/Rhtslib/usrlib/libhts.so usr/share usr/share/doc usr/share/doc/r-bioc-rhtslib usr/share/doc/r-bioc-rhtslib/changelog.Debian.gz usr/share/doc/r-bioc-rhtslib/copyright usr/lib/R/site-library/Rhtslib/usrlib/libhts.so.2