prime-phylo (1.0.11-14+b1)

Details

Core information at a glance

Distribution
debian
Origin
debian-forky
Repository
https://deb.debian.org/debian
Codename
forky
Component
main
Source
prime-phylo (1.0.11-14)
Architecture
s390x
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
3.1 kB
Size expected
794.4 kB
Size actual
794.4 kB
Size match

Dependencies

Required package dependencies

  • perl:any
  • libblas3 | libblas.so.3
  • libboost-mpi1.90.0 (>= 1.90.0)
  • libboost-serialization1.90.0 (>= 1.90.0)
  • libc6 (>= 2.38)
  • libgcc-s1 (>= 4.2)
  • liblapack3 | liblapack.so.3
  • libopenmpi40 (>= 5.0.10)
  • libstdc++6 (>= 14)
  • libxml2-16 (>= 2.14.1)

Suggested packages

Recommended additional packages

  • njplot
  • treeviewx
  • muscle
  • probalign
  • mafft
  • python3-biopython
  • mrbayes
  • phyml
  • raxml

Description

bayesian estimation of gene trees taking the species tree into account

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5eff20207…4894a376
SHA-1a04dec32…c3f54111
SHA-2562be82039…a0e6fa23
SHA-512d677bc5e…dbb1e740

Contents

Files and directories included

.
usr
usr/bin
usr/bin/chainsaw
usr/bin/mcmc_analysis
usr/bin/primeDLRS
usr/bin/primeDTLSR
usr/bin/primeGEM
usr/bin/reconcile
usr/bin/reroot
usr/bin/showtree
usr/bin/tree2leafnames
usr/bin/treesize
usr/lib
usr/lib/prime-phylo
usr/lib/prime-phylo/libprime-phylo-sfile.so
usr/lib/prime-phylo/libprime-phylo.so
usr/share
usr/share/doc
usr/share/doc/prime-phylo
usr/share/doc/prime-phylo/README
usr/share/doc/prime-phylo/README.test
usr/share/doc/prime-phylo/changelog.Debian.gz
usr/share/doc/prime-phylo/changelog.Debian.s390x.gz
usr/share/doc/prime-phylo/changelog.gz
usr/share/doc/prime-phylo/copyright
usr/share/doc/prime-phylo/examples
usr/share/doc/prime-phylo/examples/gse
usr/share/doc/prime-phylo/examples/hostfile
usr/share/doc/prime-phylo/examples/seqfile
usr/share/doc/prime-phylo/examples/treefile
usr/share/doc/prime-phylo/run-unit-test
usr/share/lintian
usr/share/lintian/overrides
usr/share/lintian/overrides/prime-phylo
usr/share/man
usr/share/man/man1
usr/share/man/man1/chainsaw.1.gz
usr/share/man/man1/mcmc_analysis.1.gz
usr/share/man/man1/primeDLRS.1.gz
usr/share/man/man1/primeDTLSR.1.gz
usr/share/man/man1/primeGEM.1.gz
usr/share/man/man1/reconcile.1.gz
usr/share/man/man1/reroot.1.gz
usr/share/man/man1/showtree.1.gz
usr/share/man/man1/tree2leafnames.1.gz
usr/share/man/man1/treesize.1.gz
usr/bin/primeGSRf
usr/share/man/man1/primeGSRf.1.gz