python-biopython-doc (1.87+dfsg-1)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-forky
- Repository
- https://deb.debian.org/debian
- Codename
- forky
- Component
- main
- Source
- python-biopython
- Architecture
- s390x
- Section
- doc
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 35 kB
- Size expected
- 18.1 MB
- Size actual
- 18.1 MB
- Size match
Suggested packages
Recommended additional packages
- None
Description
Documentation for the Biopython library
Tags
Package classification tags
devel::doc
devel::lang:python
field::biology
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | a7c92051…1a19babc | |
| SHA-1 | 9c65680b…d38c4e1c | |
| SHA-256 | 686d72ff…24f8362b | |
| SHA-512 | a8cb9355…ffca3cfe |
Contents
Files and directories included
. usr usr/share usr/share/doc usr/share/doc/python-biopython-doc usr/share/doc/python-biopython-doc/README.test usr/share/doc/python-biopython-doc/Tests usr/share/doc/python-biopython-doc/Tests/.coveragerc usr/share/doc/python-biopython-doc/Tests/Abi usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/fake.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/no_smpl1.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/nonascii_encoding.ab1.gz usr/share/doc/python-biopython-doc/Tests/Abi/test.fsa.gz usr/share/doc/python-biopython-doc/Tests/Abi/test_data.gz usr/share/doc/python-biopython-doc/Tests/Ace usr/share/doc/python-biopython-doc/Tests/Ace/consed_sample.ace.gz usr/share/doc/python-biopython-doc/Tests/Ace/contig1.ace.gz usr/share/doc/python-biopython-doc/Tests/Ace/seq.cap.ace.gz usr/share/doc/python-biopython-doc/Tests/Affy usr/share/doc/python-biopython-doc/Tests/Affy/affy_v3_example.CEL usr/share/doc/python-biopython-doc/Tests/Affy/affy_v4_example.CEL usr/share/doc/python-biopython-doc/Tests/Align usr/share/doc/python-biopython-doc/Tests/Align/bsubtilis.fa usr/share/doc/python-biopython-doc/Tests/Align/bsubtilis.txt usr/share/doc/python-biopython-doc/Tests/Align/calJac4.fa usr/share/doc/python-biopython-doc/Tests/Align/cow.fa.gz usr/share/doc/python-biopython-doc/Tests/Align/cow.txt usr/share/doc/python-biopython-doc/Tests/Align/ecoli.fa usr/share/doc/python-biopython-doc/Tests/Align/ecoli.txt usr/share/doc/python-biopython-doc/Tests/Align/hg38.chrom.sizes.gz usr/share/doc/python-biopython-doc/Tests/Align/hg38.fa usr/share/doc/python-biopython-doc/Tests/Align/mm39.fa usr/share/doc/python-biopython-doc/Tests/Align/panTro6.fa usr/share/doc/python-biopython-doc/Tests/Align/pig.fa.gz usr/share/doc/python-biopython-doc/Tests/Align/pig.txt usr/share/doc/python-biopython-doc/Tests/Align/rheMac10.fa usr/share/doc/python-biopython-doc/Tests/Align/rn7.fa usr/share/doc/python-biopython-doc/Tests/BioSQL usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-mysql.sql.gz usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-pg.sql.gz usr/share/doc/python-biopython-doc/Tests/BioSQL/biosqldb-sqlite.sql.gz usr/share/doc/python-biopython-doc/Tests/BioSQL/cor6_6.db.gz usr/share/doc/python-biopython-doc/Tests/Blast usr/share/doc/python-biopython-doc/Tests/Blast/README.txt usr/share/doc/python-biopython-doc/Tests/Blast/broken1.xml usr/share/doc/python-biopython-doc/Tests/Blast/broken2.xml usr/share/doc/python-biopython-doc/Tests/Blast/broken3.xml usr/share/doc/python-biopython-doc/Tests/Blast/broken4.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/broken5.xml usr/share/doc/python-biopython-doc/Tests/Blast/html_msgid_29_blastx_001.html usr/share/doc/python-biopython-doc/Tests/Blast/megablast_legacy.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/mirna.tab.gz usr/share/doc/python-biopython-doc/Tests/Blast/mirna.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/mock_actin.xml usr/share/doc/python-biopython-doc/Tests/Blast/mock_disco.xml usr/share/doc/python-biopython-doc/Tests/Blast/mock_orchid.xml usr/share/doc/python-biopython-doc/Tests/Blast/mock_pcr.xml usr/share/doc/python-biopython-doc/Tests/Blast/mock_short_empty.xml usr/share/doc/python-biopython-doc/Tests/Blast/mock_short_result.xml usr/share/doc/python-biopython-doc/Tests/Blast/mock_wait.html usr/share/doc/python-biopython-doc/Tests/Blast/phiblast.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_002.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_003.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_004.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_005.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_006.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_007.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_008.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_009.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_010.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_011.txt.gz usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_012.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2226_tblastn_013.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2228_tblastn_001.txt usr/share/doc/python-biopython-doc/Tests/Blast/tab_2228_tblastx_001.txt.gz usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml.bgz.gz usr/share/doc/python-biopython-doc/Tests/Blast/wnts.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_blastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_blastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_psiblast_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_rpsblast_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_tblastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml2_21500_tblastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_blastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_blastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_psiblast_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_rpsblast_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_tblastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_21500_tblastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_blastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2212L_tblastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218L_blastp_001.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218L_rpsblast_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2218_blastp_002.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2222_blastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_002.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_003.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_004.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_005.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastn_006.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_002.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_003.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_004.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastp_005.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_002.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_003.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_blastx_004.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_002.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_003.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_004.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastn_005.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_002.xml usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_003.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2226_tblastx_004.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_blastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_blastn_001_v2.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_blastp_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_blastp_001_v2.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_blastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_blastx_001_v2.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_rpsblast_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_rpsblast_001_v2.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_tblastn_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_tblastn_001_v2.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_tblastx_001.xml.gz usr/share/doc/python-biopython-doc/Tests/Blast/xml_2900_tblastx_001_v2.xml.gz usr/share/doc/python-biopython-doc/Tests/Blat usr/share/doc/python-biopython-doc/Tests/Blat/CAG33136.1.fasta usr/share/doc/python-biopython-doc/Tests/Blat/README.txt usr/share/doc/python-biopython-doc/Tests/Blat/balAcu1.fa.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed12.as usr/share/doc/python-biopython-doc/Tests/Blat/bed12.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed12.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed3.as usr/share/doc/python-biopython-doc/Tests/Blat/bed3.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed3.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed4.as usr/share/doc/python-biopython-doc/Tests/Blat/bed4.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed4.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed5.as usr/share/doc/python-biopython-doc/Tests/Blat/bed5.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed5.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed6.as usr/share/doc/python-biopython-doc/Tests/Blat/bed6.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed6.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed7.as usr/share/doc/python-biopython-doc/Tests/Blat/bed7.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed7.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed8.as usr/share/doc/python-biopython-doc/Tests/Blat/bed8.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed8.bed usr/share/doc/python-biopython-doc/Tests/Blat/bed9.as usr/share/doc/python-biopython-doc/Tests/Blat/bed9.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bed9.bed usr/share/doc/python-biopython-doc/Tests/Blat/bedExample2.as usr/share/doc/python-biopython-doc/Tests/Blat/bigPsl.as usr/share/doc/python-biopython-doc/Tests/Blat/bigPsl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bigPsl.cds usr/share/doc/python-biopython-doc/Tests/Blat/bigbed_extended.bigendian.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bigbed_extended.littleendian.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bigbedtest.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/bigbedtest.bed usr/share/doc/python-biopython-doc/Tests/Blat/bigbedtest.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/calJac3ToCalJac4.chain usr/share/doc/python-biopython-doc/Tests/Blat/dna.fa.gz usr/share/doc/python-biopython-doc/Tests/Blat/dna_rna.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/dna_rna.bed usr/share/doc/python-biopython-doc/Tests/Blat/dna_rna.chain usr/share/doc/python-biopython-doc/Tests/Blat/dna_rna.psl usr/share/doc/python-biopython-doc/Tests/Blat/dna_rna.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/dna_rna.sam usr/share/doc/python-biopython-doc/Tests/Blat/est.fa usr/share/doc/python-biopython-doc/Tests/Blat/est.panTro5.psl usr/share/doc/python-biopython-doc/Tests/Blat/fasta_34.fa usr/share/doc/python-biopython-doc/Tests/Blat/hg19ToHg38.chain usr/share/doc/python-biopython-doc/Tests/Blat/hg38.fa.gz usr/share/doc/python-biopython-doc/Tests/Blat/mirna.pslx usr/share/doc/python-biopython-doc/Tests/Blat/mm10ToMm39.chain usr/share/doc/python-biopython-doc/Tests/Blat/panTro5.fa.gz usr/share/doc/python-biopython-doc/Tests/Blat/panTro5.maf usr/share/doc/python-biopython-doc/Tests/Blat/panTro5ToPanTro6.chain usr/share/doc/python-biopython-doc/Tests/Blat/panTro5ToPanTro6.over.chain usr/share/doc/python-biopython-doc/Tests/Blat/panTro6.fa.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.bed usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.chain usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_001.sam usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_002.chain usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_002.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.bed usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.chain usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_003.sam usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.bed usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.chain usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_004.sam usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.bed usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.chain usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_34_005.sam usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_001.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_001.bed usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_001.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_001.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_002.bed usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_002.psl usr/share/doc/python-biopython-doc/Tests/Blat/psl_35_002.psl.bb.gz usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_001.pslx usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_002.pslx usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_003.pslx usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_004.pslx usr/share/doc/python-biopython-doc/Tests/Blat/pslx_34_005.pslx usr/share/doc/python-biopython-doc/Tests/Blat/pslx_35_001.pslx usr/share/doc/python-biopython-doc/Tests/Blat/pslx_35_002.pslx usr/share/doc/python-biopython-doc/Tests/Blat/rheMac8ToRheMac10.chain usr/share/doc/python-biopython-doc/Tests/Blat/rn6ToRn7.chain usr/share/doc/python-biopython-doc/Tests/Blat/rna.fa usr/share/doc/python-biopython-doc/Tests/CDAO usr/share/doc/python-biopython-doc/Tests/CDAO/test.cdao.gz usr/share/doc/python-biopython-doc/Tests/Cellosaurus usr/share/doc/python-biopython-doc/Tests/Cellosaurus/cell_lines_1.txt usr/share/doc/python-biopython-doc/Tests/Cellosaurus/cell_lines_2.txt usr/share/doc/python-biopython-doc/Tests/Cellosaurus/cell_lines_3.txt usr/share/doc/python-biopython-doc/Tests/Clustalw usr/share/doc/python-biopython-doc/Tests/Clustalw/clustalw.a2m usr/share/doc/python-biopython-doc/Tests/Clustalw/clustalw.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/clustalw.fa usr/share/doc/python-biopython-doc/Tests/Clustalw/hedgehog.aln.gz usr/share/doc/python-biopython-doc/Tests/Clustalw/kalign.a2m usr/share/doc/python-biopython-doc/Tests/Clustalw/kalign.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/kalign.fa usr/share/doc/python-biopython-doc/Tests/Clustalw/msaprobs.a2m usr/share/doc/python-biopython-doc/Tests/Clustalw/msaprobs.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/msaprobs.fa usr/share/doc/python-biopython-doc/Tests/Clustalw/muscle.a2m usr/share/doc/python-biopython-doc/Tests/Clustalw/muscle.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/muscle.fa usr/share/doc/python-biopython-doc/Tests/Clustalw/odd_consensus.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/opuntia.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/probcons.a2m usr/share/doc/python-biopython-doc/Tests/Clustalw/probcons.aln usr/share/doc/python-biopython-doc/Tests/Clustalw/probcons.fa usr/share/doc/python-biopython-doc/Tests/Clustalw/promals3d.aln.gz usr/share/doc/python-biopython-doc/Tests/Clustalw/protein.aln.gz usr/share/doc/python-biopython-doc/Tests/Cluster usr/share/doc/python-biopython-doc/Tests/Cluster/README usr/share/doc/python-biopython-doc/Tests/Cluster/cyano.txt.gz usr/share/doc/python-biopython-doc/Tests/CodonUsage usr/share/doc/python-biopython-doc/Tests/CodonUsage/HighlyExpressedGenes.txt.gz usr/share/doc/python-biopython-doc/Tests/Compass usr/share/doc/python-biopython-doc/Tests/Compass/comtest1 usr/share/doc/python-biopython-doc/Tests/Compass/comtest2 usr/share/doc/python-biopython-doc/Tests/EMBL usr/share/doc/python-biopython-doc/Tests/EMBL/101ma_no_coords.embl usr/share/doc/python-biopython-doc/Tests/EMBL/A04195.imgt usr/share/doc/python-biopython-doc/Tests/EMBL/AAA03323.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/AE017046.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/DD231055_edited.embl usr/share/doc/python-biopython-doc/Tests/EMBL/DD231055_edited2.embl usr/share/doc/python-biopython-doc/Tests/EMBL/DS830848.embl usr/share/doc/python-biopython-doc/Tests/EMBL/Human_contigs.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/RepBase23.02.embl usr/share/doc/python-biopython-doc/Tests/EMBL/SC10H5.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/TRBG361.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/U87107.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/embl_with_0_line.embl usr/share/doc/python-biopython-doc/Tests/EMBL/epo_prt_selection.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/hla_3260_sample.imgt.gz usr/share/doc/python-biopython-doc/Tests/EMBL/kipo_prt_sample.embl.gz usr/share/doc/python-biopython-doc/Tests/EMBL/location_wrap.embl usr/share/doc/python-biopython-doc/Tests/EMBL/patents.embl usr/share/doc/python-biopython-doc/Tests/EMBL/xx_after_co.embl usr/share/doc/python-biopython-doc/Tests/Emboss usr/share/doc/python-biopython-doc/Tests/Emboss/NirK.primer3.gz usr/share/doc/python-biopython-doc/Tests/Emboss/NirK_full.primer3.gz usr/share/doc/python-biopython-doc/Tests/Emboss/alignret.txt usr/share/doc/python-biopython-doc/Tests/Emboss/bac_find.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/bac_find.psearch usr/share/doc/python-biopython-doc/Tests/Emboss/cds_forward.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/cds_reverse.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/emboss_pair_aln_full_blank_line.txt.gz usr/share/doc/python-biopython-doc/Tests/Emboss/internal_oligo.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/matcher_pair.txt usr/share/doc/python-biopython-doc/Tests/Emboss/matcher_simple.txt usr/share/doc/python-biopython-doc/Tests/Emboss/needle.txt.gz usr/share/doc/python-biopython-doc/Tests/Emboss/needle_asis.txt.gz usr/share/doc/python-biopython-doc/Tests/Emboss/needle_nobrief_multiple.pair usr/share/doc/python-biopython-doc/Tests/Emboss/needle_overhang.txt.gz usr/share/doc/python-biopython-doc/Tests/Emboss/no_oligo.primer3.gz usr/share/doc/python-biopython-doc/Tests/Emboss/short.primer3 usr/share/doc/python-biopython-doc/Tests/Emboss/water.txt usr/share/doc/python-biopython-doc/Tests/Emboss/water2.txt usr/share/doc/python-biopython-doc/Tests/Emboss/water_reverse1.txt usr/share/doc/python-biopython-doc/Tests/Emboss/water_reverse2.txt usr/share/doc/python-biopython-doc/Tests/Emboss/water_reverse3.txt usr/share/doc/python-biopython-doc/Tests/Emboss/water_reverse4.txt usr/share/doc/python-biopython-doc/Tests/Entrez usr/share/doc/python-biopython-doc/Tests/Entrez/biosample.xml usr/share/doc/python-biopython-doc/Tests/Entrez/efetch_pmc.xml usr/share/doc/python-biopython-doc/Tests/Entrez/efetch_schemas.xml usr/share/doc/python-biopython-doc/Tests/Entrez/einfo1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/einfo2.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/einfo4.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink1.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/elink2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink3.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/elink4.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/elink5.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink6.xml usr/share/doc/python-biopython-doc/Tests/Entrez/elink7.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/elink8.xml usr/share/doc/python-biopython-doc/Tests/Entrez/epost1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/epost2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/epost3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch5.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch6.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch7.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esearch8.xml usr/share/doc/python-biopython-doc/Tests/Entrez/espell.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary1.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary3.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary4.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary5.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary6.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary8.xml usr/share/doc/python-biopython-doc/Tests/Entrez/esummary9.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/journals.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/nucleotide1.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/nucleotide2.xml usr/share/doc/python-biopython-doc/Tests/Entrez/protein.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed1.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed2.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed3.html usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed4.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed5.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed6.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/pubmed7.xml.gz usr/share/doc/python-biopython-doc/Tests/Entrez/taxonomy.xml.gz usr/share/doc/python-biopython-doc/Tests/Enzymes usr/share/doc/python-biopython-doc/Tests/Enzymes/lactate.txt usr/share/doc/python-biopython-doc/Tests/Enzymes/lipoprotein.txt usr/share/doc/python-biopython-doc/Tests/Enzymes/proline.txt usr/share/doc/python-biopython-doc/Tests/Enzymes/valine.txt usr/share/doc/python-biopython-doc/Tests/ExPASy usr/share/doc/python-biopython-doc/Tests/ExPASy/scanprosite_response.xml.gz usr/share/doc/python-biopython-doc/Tests/Exonerate usr/share/doc/python-biopython-doc/Tests/Exonerate/README.txt.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_affine_local.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_affine_local_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_affine_local_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cdna2genome.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cdna2genome_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cdna2genome_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_cigar_fshifts.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2coding_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2genome.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2genome_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_coding2genome_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_dna2protein.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_dna2protein_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_dna2protein_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_est2genome.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_est2genome_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_est2genome_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_genome2genome.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ner.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ner_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ner_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2dna_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2genome.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2genome_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_protein2genome_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_trans.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_trans_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_trans_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_m_ungapped_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_cigar_fshifts2.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_multiple_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_22_q_none.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_24_m_protein2genome_met_intron.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_24_m_protein2genome_met_intron_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_24_m_protein2genome_met_intron_vulgar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts.exn.gz usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_cigar.exn usr/share/doc/python-biopython-doc/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_vulgar.exn usr/share/doc/python-biopython-doc/Tests/ExtendedPhylip usr/share/doc/python-biopython-doc/Tests/ExtendedPhylip/primates.phyx.gz usr/share/doc/python-biopython-doc/Tests/FSSP usr/share/doc/python-biopython-doc/Tests/FSSP/1cnv.fssp.gz usr/share/doc/python-biopython-doc/Tests/Fasta usr/share/doc/python-biopython-doc/Tests/Fasta/README usr/share/doc/python-biopython-doc/Tests/Fasta/aster.pro usr/share/doc/python-biopython-doc/Tests/Fasta/aster_blast.pro usr/share/doc/python-biopython-doc/Tests/Fasta/aster_no_wrap.pro usr/share/doc/python-biopython-doc/Tests/Fasta/aster_pearson.pro usr/share/doc/python-biopython-doc/Tests/Fasta/centaurea.nu usr/share/doc/python-biopython-doc/Tests/Fasta/dups.fasta usr/share/doc/python-biopython-doc/Tests/Fasta/elderberry.nu usr/share/doc/python-biopython-doc/Tests/Fasta/f001 usr/share/doc/python-biopython-doc/Tests/Fasta/f002 usr/share/doc/python-biopython-doc/Tests/Fasta/f003.fa usr/share/doc/python-biopython-doc/Tests/Fasta/fa01 usr/share/doc/python-biopython-doc/Tests/Fasta/flowers.pro.gz usr/share/doc/python-biopython-doc/Tests/Fasta/lavender.nu usr/share/doc/python-biopython-doc/Tests/Fasta/loveliesbleeding.pro usr/share/doc/python-biopython-doc/Tests/Fasta/lupine.nu usr/share/doc/python-biopython-doc/Tests/Fasta/nucleotide_lib.fa.gz usr/share/doc/python-biopython-doc/Tests/Fasta/nucleotide_m8CB.txt usr/share/doc/python-biopython-doc/Tests/Fasta/nucleotide_m8CC.txt usr/share/doc/python-biopython-doc/Tests/Fasta/output001.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output002.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output003.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output004.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output005.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output006.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output007.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output008.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output009.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output010.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output011.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output012.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output013.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/output014.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output015.m10 usr/share/doc/python-biopython-doc/Tests/Fasta/output016.m10.gz usr/share/doc/python-biopython-doc/Tests/Fasta/phlox.nu usr/share/doc/python-biopython-doc/Tests/Fasta/protein_lib.fa usr/share/doc/python-biopython-doc/Tests/Fasta/protein_m8CB.txt usr/share/doc/python-biopython-doc/Tests/Fasta/protein_m8CC.txt usr/share/doc/python-biopython-doc/Tests/Fasta/rose.pro usr/share/doc/python-biopython-doc/Tests/Fasta/rosemary.pro usr/share/doc/python-biopython-doc/Tests/Fasta/sweetpea.nu usr/share/doc/python-biopython-doc/Tests/Fasta/wisteria.nu usr/share/doc/python-biopython-doc/Tests/GFA usr/share/doc/python-biopython-doc/Tests/GFA/corrupt_checksum.gfa usr/share/doc/python-biopython-doc/Tests/GFA/corrupt_len.gfa usr/share/doc/python-biopython-doc/Tests/GFA/corrupt_segment_fields.gfa usr/share/doc/python-biopython-doc/Tests/GFA/corrupt_tag_name.gfa usr/share/doc/python-biopython-doc/Tests/GFA/corrupt_tag_type.gfa usr/share/doc/python-biopython-doc/Tests/GFA/fake_gfa2.gfa usr/share/doc/python-biopython-doc/Tests/GFA/fake_with_checksum.gfa usr/share/doc/python-biopython-doc/Tests/GFA/no_seq.gfa usr/share/doc/python-biopython-doc/Tests/GFA/seq.gfa.gz usr/share/doc/python-biopython-doc/Tests/GFA/seq_with_len.gfa.gz usr/share/doc/python-biopython-doc/Tests/GFF usr/share/doc/python-biopython-doc/Tests/GFF/NC_001422.gbk.gz usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802.fna.gz usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802lc.fna.gz usr/share/doc/python-biopython-doc/Tests/GFF/NC_001802x.fna.gz usr/share/doc/python-biopython-doc/Tests/GFF/multi.fna usr/share/doc/python-biopython-doc/Tests/Gck usr/share/doc/python-biopython-doc/Tests/Gck/artificial.gck usr/share/doc/python-biopython-doc/Tests/GenBank usr/share/doc/python-biopython-doc/Tests/GenBank/1MRR_A.gp.gz usr/share/doc/python-biopython-doc/Tests/GenBank/DS830848.gb usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/EU851978_output.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/EZ116220.gb usr/share/doc/python-biopython-doc/Tests/GenBank/GU949562.1.gb usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/HM138502_output.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/KF527485_output.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.faa.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb.bgz.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_000932.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.faa usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.ffn.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.fna.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NC_005816.tsv usr/share/doc/python-biopython-doc/Tests/GenBank/NP_416719.gbwithparts.gz usr/share/doc/python-biopython-doc/Tests/GenBank/NT_019265.gb usr/share/doc/python-biopython-doc/Tests/GenBank/addgene-plasmid-11664-sequence-180430.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/addgene-plasmid-39296-sequence-49545.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/arab1.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/bad_loc_wrap.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap.gb usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap_CDS.gb usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap_fuzzy.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/bad_origin_wrap_linear.gb usr/share/doc/python-biopython-doc/Tests/GenBank/blank_seq.gb usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb.bgz.gz usr/share/doc/python-biopython-doc/Tests/GenBank/cor6_6.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/dbsource_wrap.gb usr/share/doc/python-biopython-doc/Tests/GenBank/empty_accession.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/empty_feature_qualifier.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/empty_version.gbk.gz usr/share/doc/python-biopython-doc/Tests/GenBank/extra_keywords.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/gbvrl1_start.seq.gz usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_locus_line_spacing.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_misc_feature.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_product.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/invalid_structured_comment.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/iro.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/negative_location.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/no_end_marker.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/no_origin_no_end.gb usr/share/doc/python-biopython-doc/Tests/GenBank/noref.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/noref_date_warning.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/one_of.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/origin_line.gb usr/share/doc/python-biopython-doc/Tests/GenBank/pBAD30.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/pri1.gb usr/share/doc/python-biopython-doc/Tests/GenBank/protein_refseq.gb usr/share/doc/python-biopython-doc/Tests/GenBank/protein_refseq2.gb.gz usr/share/doc/python-biopython-doc/Tests/GenBank/qualifier_escaping_read.gb usr/share/doc/python-biopython-doc/Tests/GenBank/qualifier_escaping_write.gb usr/share/doc/python-biopython-doc/Tests/GenBank/tls_KDHP01000000.gb usr/share/doc/python-biopython-doc/Tests/GenBank/tsa_acropora.gb usr/share/doc/python-biopython-doc/Tests/GenBank/wrong_sequence_indent.gb.gz usr/share/doc/python-biopython-doc/Tests/Geo usr/share/doc/python-biopython-doc/Tests/Geo/GSE16.txt usr/share/doc/python-biopython-doc/Tests/Geo/GSM645.txt usr/share/doc/python-biopython-doc/Tests/Geo/GSM691.txt usr/share/doc/python-biopython-doc/Tests/Geo/GSM700.txt usr/share/doc/python-biopython-doc/Tests/Geo/GSM804.txt usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy.txt.gz usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_affy_chp.txt.gz usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_dual.txt.gz usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_family.txt.gz usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_platform.txt.gz usr/share/doc/python-biopython-doc/Tests/Geo/soft_ex_series.txt usr/share/doc/python-biopython-doc/Tests/Graphics usr/share/doc/python-biopython-doc/Tests/Graphics/README usr/share/doc/python-biopython-doc/Tests/HHsuite usr/share/doc/python-biopython-doc/Tests/HHsuite/2uvo_hhblits.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/2uvo_hhblits_emptytable.hhr usr/share/doc/python-biopython-doc/Tests/HHsuite/2uvo_hhblits_onlyheader.hhr usr/share/doc/python-biopython-doc/Tests/HHsuite/2uvo_hhsearch.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/4p79_hhsearch_server_NOssm.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/4y9h_hhsearch_server_NOssm.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/7rbx_A_hhsearch_trunc.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/README.txt usr/share/doc/python-biopython-doc/Tests/HHsuite/allx.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/hhpred_9590198.hhr.gz usr/share/doc/python-biopython-doc/Tests/HHsuite/hhsearch_q9bsu1_uniclust_w_ss_pfamA_30.hhr.gz usr/share/doc/python-biopython-doc/Tests/Hmmer usr/share/doc/python-biopython-doc/Tests/Hmmer/README.txt usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_003.out usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmscan_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_30_hmmsearch_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_31b1_hmmscan_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/domtab_31b1_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_003.out usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_30_hmmscan_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_31b1_hmmscan_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/tab_31b1_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_20_hmmsearch_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_21_hmmpfam_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_22_hmmpfam_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_22_hmmsearch_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_003.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_23_hmmpfam_004.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_24_hmmpfam_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_002.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_003.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_004.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_005.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_006.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_007.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_008.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_009.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_010.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmscan_011.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_001.out usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_002.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_003.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_004.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_30_hmmsearch_005.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmscan_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b1_hmmsearch_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmscan_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_001.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_hmmsearch_002.out.gz usr/share/doc/python-biopython-doc/Tests/Hmmer/text_31b2_phmmer_001.out.gz usr/share/doc/python-biopython-doc/Tests/Infernal usr/share/doc/python-biopython-doc/Tests/Infernal/cmscan_115_IRES_5S_U2_Yeast.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmscan_115_IRES_5S_U2_Yeast.txt.gz usr/share/doc/python-biopython-doc/Tests/Infernal/cmscan_115_IRES_5S_U2_Yeast_fmt_2.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmscan_115_IRES_5S_U2_Yeast_fmt_3.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmscan_115_SSU_clan-fmt_2.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_5S_Yeast.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_5S_Yeast.txt.gz usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_5S_Yeast_noali.txt usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_IRES_5S_U2_Yeast.txt.gz usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_IRES_Yeast.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_IRES_Yeast.txt usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast.txt.gz usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_full.txt.gz usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_full_noali.txt usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_full_shuffled.tbl usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_full_shuffled.txt.gz usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_hmmonly.txt usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_noali.txt usr/share/doc/python-biopython-doc/Tests/Infernal/cmsearch_114_U2_Yeast_notextw.txt usr/share/doc/python-biopython-doc/Tests/IntelliGenetics usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/TAT_mase_nuc.txt.gz usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/VIF_mase-pro.txt.gz usr/share/doc/python-biopython-doc/Tests/IntelliGenetics/vpu_nucaligned.txt usr/share/doc/python-biopython-doc/Tests/InterProScan usr/share/doc/python-biopython-doc/Tests/InterProScan/test_001.xml.gz usr/share/doc/python-biopython-doc/Tests/KEGG usr/share/doc/python-biopython-doc/Tests/KEGG/compound.irregular usr/share/doc/python-biopython-doc/Tests/KEGG/compound.sample.gz usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.4letter.gz usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.irregular usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.new usr/share/doc/python-biopython-doc/Tests/KEGG/enzyme.sample.gz usr/share/doc/python-biopython-doc/Tests/KEGG/gene.sample usr/share/doc/python-biopython-doc/Tests/KEGG/ko00010.xml.gz usr/share/doc/python-biopython-doc/Tests/KEGG/ko00253.xml.gz usr/share/doc/python-biopython-doc/Tests/KEGG/ko01100.xml.gz usr/share/doc/python-biopython-doc/Tests/KEGG/ko03070.xml.gz usr/share/doc/python-biopython-doc/Tests/KEGG/map00950.rea.gz usr/share/doc/python-biopython-doc/Tests/KEGG/map01100.png usr/share/doc/python-biopython-doc/Tests/KEGG/map03070.png usr/share/doc/python-biopython-doc/Tests/MAF usr/share/doc/python-biopython-doc/Tests/MAF/bigMaf.as usr/share/doc/python-biopython-doc/Tests/MAF/bug2453.maf usr/share/doc/python-biopython-doc/Tests/MAF/bundle_without_target.bb.gz usr/share/doc/python-biopython-doc/Tests/MAF/bundle_without_target.maf usr/share/doc/python-biopython-doc/Tests/MAF/cnksr3.fa usr/share/doc/python-biopython-doc/Tests/MAF/corrupt.idx.gz usr/share/doc/python-biopython-doc/Tests/MAF/humor.maf.gz usr/share/doc/python-biopython-doc/Tests/MAF/invalid.idx usr/share/doc/python-biopython-doc/Tests/MAF/length_coords_mismatch.maf usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.bb.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.maf.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10.mafindex.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.maf.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_bad.mafindex.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.maf.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_mm9_chr10_big.mafindex.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_test.bb.gz usr/share/doc/python-biopython-doc/Tests/MAF/ucsc_test.maf usr/share/doc/python-biopython-doc/Tests/MAF/unfinished.idx.gz usr/share/doc/python-biopython-doc/Tests/MAF/wrong_version.idx.gz usr/share/doc/python-biopython-doc/Tests/Mauve usr/share/doc/python-biopython-doc/Tests/Mauve/canFam2.fa usr/share/doc/python-biopython-doc/Tests/Mauve/combined.fa usr/share/doc/python-biopython-doc/Tests/Mauve/combined.xmfa usr/share/doc/python-biopython-doc/Tests/Mauve/combined.xmfa.backbone usr/share/doc/python-biopython-doc/Tests/Mauve/combined.xmfa.bbcols usr/share/doc/python-biopython-doc/Tests/Mauve/equCab1.fa usr/share/doc/python-biopython-doc/Tests/Mauve/mm9.fa usr/share/doc/python-biopython-doc/Tests/Mauve/separate.xmfa usr/share/doc/python-biopython-doc/Tests/Mauve/separate.xmfa.backbone usr/share/doc/python-biopython-doc/Tests/Mauve/separate.xmfa.bbcols usr/share/doc/python-biopython-doc/Tests/Mauve/simple.fa.gz usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa.backbone usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa.bbcols usr/share/doc/python-biopython-doc/Tests/Mauve/simple.xmfa.gz usr/share/doc/python-biopython-doc/Tests/Mauve/simple_short.xmfa usr/share/doc/python-biopython-doc/Tests/Medline usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result1.txt usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result2.txt.gz usr/share/doc/python-biopython-doc/Tests/Medline/pubmed_result3.txt usr/share/doc/python-biopython-doc/Tests/MetaTool usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta3.out usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta4.out.gz usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta6.out.gz usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta7.out.gz usr/share/doc/python-biopython-doc/Tests/MetaTool/Meta8.out.gz usr/share/doc/python-biopython-doc/Tests/MetaTool/meta.out.gz usr/share/doc/python-biopython-doc/Tests/MetaTool/meta2.out.gz usr/share/doc/python-biopython-doc/Tests/MetaTool/meta9.out.gz usr/share/doc/python-biopython-doc/Tests/NBRF usr/share/doc/python-biopython-doc/Tests/NBRF/B_nuc.pir.gz usr/share/doc/python-biopython-doc/Tests/NBRF/Cw_prot.pir.gz usr/share/doc/python-biopython-doc/Tests/NBRF/DMA_nuc.pir usr/share/doc/python-biopython-doc/Tests/NBRF/DMB_prot.pir usr/share/doc/python-biopython-doc/Tests/NBRF/clustalw.pir.gz usr/share/doc/python-biopython-doc/Tests/NMR usr/share/doc/python-biopython-doc/Tests/NMR/noed.xpk usr/share/doc/python-biopython-doc/Tests/NMR/out_example.xpk usr/share/doc/python-biopython-doc/Tests/NeXML usr/share/doc/python-biopython-doc/Tests/NeXML/characters.xml.gz usr/share/doc/python-biopython-doc/Tests/NeXML/edgelabels.xml usr/share/doc/python-biopython-doc/Tests/NeXML/meta_taxa.xml usr/share/doc/python-biopython-doc/Tests/NeXML/meta_types.xml usr/share/doc/python-biopython-doc/Tests/NeXML/nexml.xml usr/share/doc/python-biopython-doc/Tests/NeXML/phenoscape.xml usr/share/doc/python-biopython-doc/Tests/NeXML/sets.xml usr/share/doc/python-biopython-doc/Tests/NeXML/taxa.xml usr/share/doc/python-biopython-doc/Tests/NeXML/timetree.xml.gz usr/share/doc/python-biopython-doc/Tests/NeXML/tolweb.xml usr/share/doc/python-biopython-doc/Tests/NeXML/treebase-record.xml.gz usr/share/doc/python-biopython-doc/Tests/NeXML/trees-uris.xml usr/share/doc/python-biopython-doc/Tests/NeXML/trees.xml.gz usr/share/doc/python-biopython-doc/Tests/NeuralNetwork usr/share/doc/python-biopython-doc/Tests/NeuralNetwork/enolase.fasta usr/share/doc/python-biopython-doc/Tests/NeuralNetwork/repeat.fasta usr/share/doc/python-biopython-doc/Tests/Nexus usr/share/doc/python-biopython-doc/Tests/Nexus/ByteOrderMarkFile.nwk usr/share/doc/python-biopython-doc/Tests/Nexus/bats.nex.gz usr/share/doc/python-biopython-doc/Tests/Nexus/codonposset.nex usr/share/doc/python-biopython-doc/Tests/Nexus/int_node_labels.nwk usr/share/doc/python-biopython-doc/Tests/Nexus/test.new usr/share/doc/python-biopython-doc/Tests/Nexus/test_Nexus_input.nex usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex.gz usr/share/doc/python-biopython-doc/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex.gz usr/share/doc/python-biopython-doc/Tests/Nib usr/share/doc/python-biopython-doc/Tests/Nib/test_even.fa usr/share/doc/python-biopython-doc/Tests/Nib/test_even_bigendian.nib usr/share/doc/python-biopython-doc/Tests/Nib/test_even_littleendian.nib usr/share/doc/python-biopython-doc/Tests/Nib/test_odd.fa usr/share/doc/python-biopython-doc/Tests/Nib/test_odd_bigendian.nib usr/share/doc/python-biopython-doc/Tests/Nib/test_odd_littleendian.nib usr/share/doc/python-biopython-doc/Tests/PAML usr/share/doc/python-biopython-doc/Tests/PAML/Alignments usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/aa_alignment.phylip usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/alignment.phylip usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/dottednames.phylip usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/dottednum.fasta usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/longnames.fasta usr/share/doc/python-biopython-doc/Tests/PAML/Alignments/lysinYangSwanson2002.nuc.gz usr/share/doc/python-biopython-doc/Tests/PAML/Control_files usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/README.txt usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/bad1.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/bad2.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/bad3.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/SE.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/alpha1rho1.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/baseml.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model0.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model1.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model2.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model3.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model4.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model5.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model6.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model7.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/model8.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nhomo1.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nhomo3.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nhomo4.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK1.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK2.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK3.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml/nparK4.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/baseml.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/NSsite3.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/SE.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/aa_model0.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/aa_pairwise.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/all_NSsites.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/branchsiteA.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/clademodelC.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/codeml.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/freeratio.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/m2a_rel.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/codeml/pairwise.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/species.tree usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00 usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/yn00.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/yn00_dotted.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/yn00_dottednum.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00/yn00_long.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Control_files/yn00.ctl usr/share/doc/python-biopython-doc/Tests/PAML/Results usr/share/doc/python-biopython-doc/Tests/PAML/Results/bad_results.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/SE/SE-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1 usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/baseml_SE.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/baseml_alpha1rho1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model0-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model1-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model2-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model3-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model4-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model5-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model6-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model7-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/model/model8-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml41.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml43.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml44.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/baseml/versions/baseml44c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3 usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/SE/SE-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0 usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02 usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1 usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34 usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/codeml/tree_regexp_versatility.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00 usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_1.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_3.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_4c.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_5.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_6.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_7.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00-4_8.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00_dotted-4_9i.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00_dottednum-4_9i.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Results/yn00/yn00_long-4_8.out.gz usr/share/doc/python-biopython-doc/Tests/PAML/Trees usr/share/doc/python-biopython-doc/Tests/PAML/Trees/bad.tree usr/share/doc/python-biopython-doc/Tests/PAML/Trees/lysin.trees usr/share/doc/python-biopython-doc/Tests/PAML/Trees/lysin.trees.4.6 usr/share/doc/python-biopython-doc/Tests/PAML/Trees/species.tree usr/share/doc/python-biopython-doc/Tests/PAML/gen_results.py.gz usr/share/doc/python-biopython-doc/Tests/PDB usr/share/doc/python-biopython-doc/Tests/PDB/1A7G.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.asa.gz usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.mmtf.gz usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.rsa.gz usr/share/doc/python-biopython-doc/Tests/PDB/1A8O.xyzr.gz usr/share/doc/python-biopython-doc/Tests/PDB/1AS5.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/1GBT.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/1GBT.xml.gz usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/1LCD.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/1MOM_min.cif usr/share/doc/python-biopython-doc/Tests/PDB/1SSU_mod.cif usr/share/doc/python-biopython-doc/Tests/PDB/1SSU_mod.pdb usr/share/doc/python-biopython-doc/Tests/PDB/1gbt.bcif.gz usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.dssp.gz usr/share/doc/python-biopython-doc/Tests/PDB/2BEG.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/2BEG_noheader.dssp.gz usr/share/doc/python-biopython-doc/Tests/PDB/2OFG.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/2XHE.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/2n0n_M1.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/3JQH.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/3JQH.xml.gz usr/share/doc/python-biopython-doc/Tests/PDB/3jqh.bcif.gz usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/4CUP.mmtf.gz usr/share/doc/python-biopython-doc/Tests/PDB/4Q9R_min.cif usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/4ZHL.mmtf.gz usr/share/doc/python-biopython-doc/Tests/PDB/6WG6.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/6WG6.xml.gz usr/share/doc/python-biopython-doc/Tests/PDB/6WQA.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/6wg6.bcif.gz usr/share/doc/python-biopython-doc/Tests/PDB/7CFN.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/7CFN_aligned.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/7DDO.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/Ahmad_RASA.txt usr/share/doc/python-biopython-doc/Tests/PDB/Miller_RASA.txt usr/share/doc/python-biopython-doc/Tests/PDB/Sander_RASA.txt usr/share/doc/python-biopython-doc/Tests/PDB/Wilke_RASA.txt usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.cif.gz usr/share/doc/python-biopython-doc/Tests/PDB/a_structure.pdb.gz usr/share/doc/python-biopython-doc/Tests/PDB/alignment_file.fa usr/share/doc/python-biopython-doc/Tests/PDB/d256ba_.ent usr/share/doc/python-biopython-doc/Tests/PDB/disordered.pdb usr/share/doc/python-biopython-doc/Tests/PDB/dssp_xtra_Sander.txt.gz usr/share/doc/python-biopython-doc/Tests/PDB/header.pdb usr/share/doc/python-biopython-doc/Tests/PDB/ions.pdb usr/share/doc/python-biopython-doc/Tests/PDB/lib_10_z_5.txt.gz usr/share/doc/python-biopython-doc/Tests/PDB/occupancy.pdb usr/share/doc/python-biopython-doc/Tests/PQR usr/share/doc/python-biopython-doc/Tests/PQR/1A80.pqr.gz usr/share/doc/python-biopython-doc/Tests/Phd usr/share/doc/python-biopython-doc/Tests/Phd/phd1.gz usr/share/doc/python-biopython-doc/Tests/Phd/phd2 usr/share/doc/python-biopython-doc/Tests/Phd/phd_454 usr/share/doc/python-biopython-doc/Tests/Phd/phd_solexa usr/share/doc/python-biopython-doc/Tests/Phylip usr/share/doc/python-biopython-doc/Tests/Phylip/five.dat usr/share/doc/python-biopython-doc/Tests/Phylip/four.dat usr/share/doc/python-biopython-doc/Tests/Phylip/hennigian.phy usr/share/doc/python-biopython-doc/Tests/Phylip/horses.phy usr/share/doc/python-biopython-doc/Tests/Phylip/horses.tree usr/share/doc/python-biopython-doc/Tests/Phylip/interlaced.phy usr/share/doc/python-biopython-doc/Tests/Phylip/interlaced2.phy usr/share/doc/python-biopython-doc/Tests/Phylip/one.dat usr/share/doc/python-biopython-doc/Tests/Phylip/random.phy usr/share/doc/python-biopython-doc/Tests/Phylip/reference_dna.phy usr/share/doc/python-biopython-doc/Tests/Phylip/reference_dna2.phy usr/share/doc/python-biopython-doc/Tests/Phylip/sequential.phy usr/share/doc/python-biopython-doc/Tests/Phylip/sequential2.phy usr/share/doc/python-biopython-doc/Tests/Phylip/six.dat usr/share/doc/python-biopython-doc/Tests/Phylip/three.dat usr/share/doc/python-biopython-doc/Tests/Phylip/two.dat usr/share/doc/python-biopython-doc/Tests/PhyloXML usr/share/doc/python-biopython-doc/Tests/PhyloXML/apaf.xml.gz usr/share/doc/python-biopython-doc/Tests/PhyloXML/bcl_2.xml.gz usr/share/doc/python-biopython-doc/Tests/PhyloXML/distribution.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/example.xml usr/share/doc/python-biopython-doc/Tests/PhyloXML/made_up.xml.gz usr/share/doc/python-biopython-doc/Tests/PhyloXML/o_tol_332_d_dollo.xml.gz usr/share/doc/python-biopython-doc/Tests/PhyloXML/phyloxml_examples.xml.gz usr/share/doc/python-biopython-doc/Tests/PopGen usr/share/doc/python-biopython-doc/Tests/PopGen/README usr/share/doc/python-biopython-doc/Tests/PopGen/big.gen.gz usr/share/doc/python-biopython-doc/Tests/PopGen/c2line.gen usr/share/doc/python-biopython-doc/Tests/PopGen/c2space.gen usr/share/doc/python-biopython-doc/Tests/PopGen/c3line.gen usr/share/doc/python-biopython-doc/Tests/PopGen/c3space.gen usr/share/doc/python-biopython-doc/Tests/PopGen/haplo.gen.gz usr/share/doc/python-biopython-doc/Tests/PopGen/haplo2.gen usr/share/doc/python-biopython-doc/Tests/PopGen/haplo3.gen usr/share/doc/python-biopython-doc/Tests/Prosite usr/share/doc/python-biopython-doc/Tests/Prosite/Doc usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00100.txt.gz usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00113.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00144.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00149.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00340.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00424.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00472.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00640.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00787.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/pdoc00933.txt usr/share/doc/python-biopython-doc/Tests/Prosite/Doc/prosite.excerpt.doc.gz usr/share/doc/python-biopython-doc/Tests/Prosite/ps00107.txt.gz usr/share/doc/python-biopython-doc/Tests/Prosite/ps00159.txt usr/share/doc/python-biopython-doc/Tests/Prosite/ps00165.txt usr/share/doc/python-biopython-doc/Tests/Prosite/ps00432.txt.gz usr/share/doc/python-biopython-doc/Tests/Prosite/ps00488.txt usr/share/doc/python-biopython-doc/Tests/Prosite/ps00546.txt usr/share/doc/python-biopython-doc/Tests/Quality usr/share/doc/python-biopython-doc/Tests/Quality/error_diff_ids.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_double_qual.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_double_seq.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_long_qual.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_no_qual.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_del.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_escape.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_null.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_space.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_tab.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_unit_sep.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_qual_vtab.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_short_qual.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_spaces.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_tabs.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_at_plus.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_at_qual.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_at_seq.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_plus.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_qual.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_seq.fastq usr/share/doc/python-biopython-doc/Tests/Quality/error_trunc_in_title.fastq usr/share/doc/python-biopython-doc/Tests/Quality/example.fasta usr/share/doc/python-biopython-doc/Tests/Quality/example.fastq usr/share/doc/python-biopython-doc/Tests/Quality/example.fastq.bgz usr/share/doc/python-biopython-doc/Tests/Quality/example.qual usr/share/doc/python-biopython-doc/Tests/Quality/example_dos.fastq usr/share/doc/python-biopython-doc/Tests/Quality/example_dos.fastq.bgz usr/share/doc/python-biopython-doc/Tests/Quality/illumina_faked.fastq usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/illumina_full_range_original_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_illumina.fastq.gz usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_sanger.fastq.gz usr/share/doc/python-biopython-doc/Tests/Quality/longreads_as_solexa.fastq.gz usr/share/doc/python-biopython-doc/Tests/Quality/longreads_original_sanger.fastq.gz usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_dna_original_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/misc_rna_original_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/sanger_93.fastq usr/share/doc/python-biopython-doc/Tests/Quality/sanger_faked.fastq usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/sanger_full_range_original_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/solexa_example.fastq usr/share/doc/python-biopython-doc/Tests/Quality/solexa_faked.fastq usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/solexa_full_range_original_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/tricky.fastq usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_as_illumina.fastq usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_as_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_as_solexa.fastq usr/share/doc/python-biopython-doc/Tests/Quality/wrapping_original_sanger.fastq usr/share/doc/python-biopython-doc/Tests/Quality/zero_length.fastq usr/share/doc/python-biopython-doc/Tests/Rebase usr/share/doc/python-biopython-doc/Tests/Rebase/bamii.htm usr/share/doc/python-biopython-doc/Tests/Rebase/bamii.txt usr/share/doc/python-biopython-doc/Tests/Rebase/cac81.htm usr/share/doc/python-biopython-doc/Tests/Rebase/cac81.txt usr/share/doc/python-biopython-doc/Tests/Rebase/crei.htm usr/share/doc/python-biopython-doc/Tests/Rebase/crei.txt usr/share/doc/python-biopython-doc/Tests/Rebase/foki.htm usr/share/doc/python-biopython-doc/Tests/Rebase/foki.txt usr/share/doc/python-biopython-doc/Tests/Rebase/pvuii.htm usr/share/doc/python-biopython-doc/Tests/Rebase/pvuii.txt usr/share/doc/python-biopython-doc/Tests/Rebase/taqi.htm usr/share/doc/python-biopython-doc/Tests/Rebase/taqi.txt usr/share/doc/python-biopython-doc/Tests/Registry usr/share/doc/python-biopython-doc/Tests/Registry/EDD_RAT.dat.gz usr/share/doc/python-biopython-doc/Tests/Registry/bt001 usr/share/doc/python-biopython-doc/Tests/Registry/seqs.fasta usr/share/doc/python-biopython-doc/Tests/Roche usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_end.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_at_start.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_at_start.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_index_in_middle.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_no_manifest.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.fasta usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.qual.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta usr/share/doc/python-biopython-doc/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual.gz usr/share/doc/python-biopython-doc/Tests/Roche/README.txt usr/share/doc/python-biopython-doc/Tests/Roche/greek.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/invalid_greek_E3MFGYR02.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/invalid_paired_E3MFGYR02.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/paired.sff.gz usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff.idx.gz usr/share/doc/python-biopython-doc/Tests/Roche/triple_sff_rel_paths.idx.gz usr/share/doc/python-biopython-doc/Tests/SCOP usr/share/doc/python-biopython-doc/Tests/SCOP/dir.cla.scop.txt_test usr/share/doc/python-biopython-doc/Tests/SCOP/dir.des.scop.txt_test usr/share/doc/python-biopython-doc/Tests/SCOP/dir.hie.scop.txt_test usr/share/doc/python-biopython-doc/Tests/SCOP/raftest.txt.gz usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id usr/share/doc/python-biopython-doc/Tests/SCOP/testDom.txt usr/share/doc/python-biopython-doc/Tests/Saf usr/share/doc/python-biopython-doc/Tests/Saf/saf1.txt usr/share/doc/python-biopython-doc/Tests/SamBam usr/share/doc/python-biopython-doc/Tests/SamBam/bam1.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/bam1_sorted.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/bam2.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/bam2_sorted.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.fa usr/share/doc/python-biopython-doc/Tests/SamBam/ex1.sam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_header.sam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/ex1_refresh.bam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/readme.txt usr/share/doc/python-biopython-doc/Tests/SamBam/sam1.sam.gz usr/share/doc/python-biopython-doc/Tests/SamBam/sam2.sam.gz usr/share/doc/python-biopython-doc/Tests/SeqXML usr/share/doc/python-biopython-doc/Tests/SeqXML/corrupt_example1.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/corrupt_example2.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/corrupt_example3.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/dna_example.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/global_species_example.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/protein_example.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/rna_example.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/version_01_example.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/wrong_version1.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/wrong_version2.xml usr/share/doc/python-biopython-doc/Tests/SeqXML/wrong_version3.xml usr/share/doc/python-biopython-doc/Tests/SnapGene usr/share/doc/python-biopython-doc/Tests/SnapGene/linebreak_in_qualifier_text.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/looped_feature.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/looped_feature_origin.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/pFA-KanMX4.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/sample-d.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/sample-e.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/sample-f.dna.gz usr/share/doc/python-biopython-doc/Tests/SnapGene/sample-hybridization-params.dna.gz usr/share/doc/python-biopython-doc/Tests/Stockholm usr/share/doc/python-biopython-doc/Tests/Stockholm/cath1.sth usr/share/doc/python-biopython-doc/Tests/Stockholm/cath2.sth usr/share/doc/python-biopython-doc/Tests/Stockholm/cath3.sth usr/share/doc/python-biopython-doc/Tests/Stockholm/example.sth usr/share/doc/python-biopython-doc/Tests/Stockholm/example_nonstandardannotations.sth usr/share/doc/python-biopython-doc/Tests/Stockholm/funny.sth usr/share/doc/python-biopython-doc/Tests/Stockholm/globins45.ali.gz usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam1.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam2.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam3.seed.txt.gz usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam4.seed.txt.gz usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam5.seed.txt.gz usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam6.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam7.seed.txt.gz usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam8.seed.txt.gz usr/share/doc/python-biopython-doc/Tests/Stockholm/pfam9.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/rfam1.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/rfam2.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/rfam3.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/rfam4.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/rfam5.seed.txt usr/share/doc/python-biopython-doc/Tests/Stockholm/simple.sth usr/share/doc/python-biopython-doc/Tests/SubsMat usr/share/doc/python-biopython-doc/Tests/SubsMat/aaDistrib.txt usr/share/doc/python-biopython-doc/Tests/SubsMat/acc_rep_mat.pik usr/share/doc/python-biopython-doc/Tests/SubsMat/protein_count.txt usr/share/doc/python-biopython-doc/Tests/SubsMat/protein_freq.txt usr/share/doc/python-biopython-doc/Tests/SubsMat/redAADistrib.txt usr/share/doc/python-biopython-doc/Tests/SubsMat/redAltAADistrib.txt usr/share/doc/python-biopython-doc/Tests/SwissProt usr/share/doc/python-biopython-doc/Tests/SwissProt/F2CXE6.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/F2CXE6.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/H2CNN8.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/H2CNN8.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/O23729.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/O95832.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P04439.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P0A186.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P0CK95.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P16235.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P39896.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/P60137.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P60904.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P62258.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P62330.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P68308.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/P84001.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/P97881.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13454.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/Q13639.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/Q7Z739.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/R5HY77.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/README usr/share/doc/python-biopython-doc/Tests/SwissProt/UniRef90_P99999.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/keywlist.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/keywlist2.txt usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.fasta usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.gff.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.list usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.rdf.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.txt.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/multi_ex.xml.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/multiligand.xml usr/share/doc/python-biopython-doc/Tests/SwissProt/sp012 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp013 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp015 usr/share/doc/python-biopython-doc/Tests/SwissProt/sp016.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/uni001.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/uni002.gz usr/share/doc/python-biopython-doc/Tests/SwissProt/uni003.gz usr/share/doc/python-biopython-doc/Tests/TreeConstruction usr/share/doc/python-biopython-doc/Tests/TreeConstruction/adam_refs.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/consensus_refs.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/majority_ref.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/msa.phy usr/share/doc/python-biopython-doc/Tests/TreeConstruction/neighbor_trees.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/nj.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/nj_min.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/pars3.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/strict_refs.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/test.log usr/share/doc/python-biopython-doc/Tests/TreeConstruction/trees.tre usr/share/doc/python-biopython-doc/Tests/TreeConstruction/upgma.tre usr/share/doc/python-biopython-doc/Tests/TwoBit usr/share/doc/python-biopython-doc/Tests/TwoBit/sequence.bigendian.2bit usr/share/doc/python-biopython-doc/Tests/TwoBit/sequence.fa usr/share/doc/python-biopython-doc/Tests/TwoBit/sequence.littleendian.2bit usr/share/doc/python-biopython-doc/Tests/TwoBit/sequence.long.2bit usr/share/doc/python-biopython-doc/Tests/UniGene usr/share/doc/python-biopython-doc/Tests/UniGene/Eca.1.2425.data.gz usr/share/doc/python-biopython-doc/Tests/UniGene/Hs.2.data.gz usr/share/doc/python-biopython-doc/Tests/UniGene/Mdm_partial.data usr/share/doc/python-biopython-doc/Tests/UniProt usr/share/doc/python-biopython-doc/Tests/UniProt/gene_association.goa_yeast.1.gaf.gz usr/share/doc/python-biopython-doc/Tests/UniProt/goa_human_sample.gpi usr/share/doc/python-biopython-doc/Tests/UniProt/goa_yeast.gaf.gz usr/share/doc/python-biopython-doc/Tests/UniProt/goa_yeast.gpa.59.gpa.gz usr/share/doc/python-biopython-doc/Tests/UniProt/gp_information.goa_yeast.28.gpi.gz usr/share/doc/python-biopython-doc/Tests/Xdna usr/share/doc/python-biopython-doc/Tests/Xdna/sample-a.xdna usr/share/doc/python-biopython-doc/Tests/Xdna/sample-b.xdna usr/share/doc/python-biopython-doc/Tests/Xdna/sample-c.xprt usr/share/doc/python-biopython-doc/Tests/biosql.ini.appveyor usr/share/doc/python-biopython-doc/Tests/biosql.ini.sample usr/share/doc/python-biopython-doc/Tests/codonalign usr/share/doc/python-biopython-doc/Tests/codonalign/adh.aln.gz usr/share/doc/python-biopython-doc/Tests/codonalign/drosophila.fasta.gz usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_id usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_nucl.fa.gz usr/share/doc/python-biopython-doc/Tests/codonalign/egfr_pro.aln.gz usr/share/doc/python-biopython-doc/Tests/codonalign/nucl1.fa usr/share/doc/python-biopython-doc/Tests/codonalign/nucl2.fa.gz usr/share/doc/python-biopython-doc/Tests/codonalign/nucl3.fa.gz usr/share/doc/python-biopython-doc/Tests/codonalign/nucl4.fa.gz usr/share/doc/python-biopython-doc/Tests/codonalign/nucl5.fa usr/share/doc/python-biopython-doc/Tests/codonalign/pro1.aln usr/share/doc/python-biopython-doc/Tests/codonalign/pro2.aln.gz usr/share/doc/python-biopython-doc/Tests/codonalign/pro3.aln.gz usr/share/doc/python-biopython-doc/Tests/codonalign/pro4.aln.gz usr/share/doc/python-biopython-doc/Tests/codonalign/pro5.aln usr/share/doc/python-biopython-doc/Tests/common_BioSQL.py.gz usr/share/doc/python-biopython-doc/Tests/common_BioSQL_online.py.gz usr/share/doc/python-biopython-doc/Tests/motifs usr/share/doc/python-biopython-doc/Tests/motifs/Arnt.sites usr/share/doc/python-biopython-doc/Tests/motifs/MA0056.1.transfac usr/share/doc/python-biopython-doc/Tests/motifs/REB1.pfm usr/share/doc/python-biopython-doc/Tests/motifs/SRF.pfm usr/share/doc/python-biopython-doc/Tests/motifs/abdb.xms.gz usr/share/doc/python-biopython-doc/Tests/motifs/alignace.out.gz usr/share/doc/python-biopython-doc/Tests/motifs/clusterbuster.pfm usr/share/doc/python-biopython-doc/Tests/motifs/clusterbuster.pfm.out usr/share/doc/python-biopython-doc/Tests/motifs/fourcolumns.pfm usr/share/doc/python-biopython-doc/Tests/motifs/fourrows.pfm usr/share/doc/python-biopython-doc/Tests/motifs/mast.Klf1-200.cd.oops.xml.txt.gz usr/share/doc/python-biopython-doc/Tests/motifs/mast.Klf1-200.cd.oops.xml.xml.gz usr/share/doc/python-biopython-doc/Tests/motifs/mast.adh.de.oops.html.txt usr/share/doc/python-biopython-doc/Tests/motifs/mast.adh.de.oops.html.xml usr/share/doc/python-biopython-doc/Tests/motifs/mast.crp0.de.oops.txt.txt.gz usr/share/doc/python-biopython-doc/Tests/motifs/mast.crp0.de.oops.txt.xml.gz usr/share/doc/python-biopython-doc/Tests/motifs/meme.INO_up800.classic.oops.xml.gz usr/share/doc/python-biopython-doc/Tests/motifs/meme.adh.classic.oops.xml.gz usr/share/doc/python-biopython-doc/Tests/motifs/meme.farntrans5.classic.anr.xml.gz usr/share/doc/python-biopython-doc/Tests/motifs/meme.out.gz usr/share/doc/python-biopython-doc/Tests/motifs/meme.psp_test.classic.zoops.xml.gz usr/share/doc/python-biopython-doc/Tests/motifs/minimal_test.meme usr/share/doc/python-biopython-doc/Tests/motifs/minimal_test_rna.meme usr/share/doc/python-biopython-doc/Tests/motifs/transfac.dat usr/share/doc/python-biopython-doc/Tests/msf usr/share/doc/python-biopython-doc/Tests/msf/DOA_prot.msf.gz usr/share/doc/python-biopython-doc/Tests/msf/W_prot.msf usr/share/doc/python-biopython-doc/Tests/pairwise2_testCases.py.gz usr/share/doc/python-biopython-doc/Tests/phenotype usr/share/doc/python-biopython-doc/Tests/phenotype/BadPlate.json.gz usr/share/doc/python-biopython-doc/Tests/phenotype/Plate.json.gz usr/share/doc/python-biopython-doc/Tests/phenotype/Plate_2.json.gz usr/share/doc/python-biopython-doc/Tests/phenotype/Plates.csv.gz usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate.json.gz usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlate_2.json.gz usr/share/doc/python-biopython-doc/Tests/phenotype/SmallPlates.csv.gz usr/share/doc/python-biopython-doc/Tests/requires_internet.py usr/share/doc/python-biopython-doc/Tests/run_tests.py.gz usr/share/doc/python-biopython-doc/Tests/search_tests_common.py.gz usr/share/doc/python-biopython-doc/Tests/seq_tests_common.py.gz usr/share/doc/python-biopython-doc/Tests/test_Ace.py.gz usr/share/doc/python-biopython-doc/Tests/test_Affy.py.gz usr/share/doc/python-biopython-doc/Tests/test_AlignIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_AlignIO_ClustalIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_AlignIO_EmbossIO.py usr/share/doc/python-biopython-doc/Tests/test_AlignIO_FastaIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_AlignIO_MauveIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_AlignIO_PhylipIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_AlignIO_convert.py usr/share/doc/python-biopython-doc/Tests/test_Align_Alignment.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_a2m.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_bed.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_bigbed.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_bigmaf.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_bigpsl.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_chain.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_clustal.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_codonalign.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_emboss.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_exonerate.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_fasta.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_format_matrix.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_hhr.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_maf.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_mauve.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_msf.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_nexus.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_phylip.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_psl.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_sam.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_stockholm.py.gz usr/share/doc/python-biopython-doc/Tests/test_Align_tabular.py.gz usr/share/doc/python-biopython-doc/Tests/test_BioSQL_MySQLdb_online.py usr/share/doc/python-biopython-doc/Tests/test_BioSQL_mysql_connector.py usr/share/doc/python-biopython-doc/Tests/test_BioSQL_mysql_connector_online.py usr/share/doc/python-biopython-doc/Tests/test_BioSQL_psycopg2_online.py usr/share/doc/python-biopython-doc/Tests/test_BioSQL_sqlite3.py usr/share/doc/python-biopython-doc/Tests/test_BioSQL_sqlite3_online.py usr/share/doc/python-biopython-doc/Tests/test_Blast_Record.py usr/share/doc/python-biopython-doc/Tests/test_Blast_parser.py.gz usr/share/doc/python-biopython-doc/Tests/test_CAPS.py.gz usr/share/doc/python-biopython-doc/Tests/test_Chi2.py usr/share/doc/python-biopython-doc/Tests/test_Cluster.py.gz usr/share/doc/python-biopython-doc/Tests/test_CodonTable.py.gz usr/share/doc/python-biopython-doc/Tests/test_ColorSpiral.py.gz usr/share/doc/python-biopython-doc/Tests/test_Compass.py usr/share/doc/python-biopython-doc/Tests/test_Consensus.py.gz usr/share/doc/python-biopython-doc/Tests/test_EMBL_unittest.py usr/share/doc/python-biopython-doc/Tests/test_EmbossPrimer.py.gz usr/share/doc/python-biopython-doc/Tests/test_Entrez.py.gz usr/share/doc/python-biopython-doc/Tests/test_Entrez_online.py.gz usr/share/doc/python-biopython-doc/Tests/test_Entrez_parser.py.gz usr/share/doc/python-biopython-doc/Tests/test_Enzyme.py.gz usr/share/doc/python-biopython-doc/Tests/test_ExPASy.py usr/share/doc/python-biopython-doc/Tests/test_ExPASy_offline.py usr/share/doc/python-biopython-doc/Tests/test_File.py usr/share/doc/python-biopython-doc/Tests/test_GenBank.py.gz usr/share/doc/python-biopython-doc/Tests/test_GenomeDiagram.py.gz usr/share/doc/python-biopython-doc/Tests/test_GraphicsChromosome.py.gz usr/share/doc/python-biopython-doc/Tests/test_GraphicsDistribution.py usr/share/doc/python-biopython-doc/Tests/test_GraphicsGeneral.py usr/share/doc/python-biopython-doc/Tests/test_KEGG.py.gz usr/share/doc/python-biopython-doc/Tests/test_KEGG_online.py.gz usr/share/doc/python-biopython-doc/Tests/test_KGML_graphics.py.gz usr/share/doc/python-biopython-doc/Tests/test_KGML_graphics_online.py usr/share/doc/python-biopython-doc/Tests/test_KGML_nographics.py.gz usr/share/doc/python-biopython-doc/Tests/test_KeyWList.py.gz usr/share/doc/python-biopython-doc/Tests/test_MafIO_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_Medline.py.gz usr/share/doc/python-biopython-doc/Tests/test_NCBIXML.py.gz usr/share/doc/python-biopython-doc/Tests/test_NCBI_qblast.py.gz usr/share/doc/python-biopython-doc/Tests/test_NMR.py.gz usr/share/doc/python-biopython-doc/Tests/test_Nexus.py.gz usr/share/doc/python-biopython-doc/Tests/test_PAML_baseml.py.gz usr/share/doc/python-biopython-doc/Tests/test_PAML_codeml.py.gz usr/share/doc/python-biopython-doc/Tests/test_PAML_yn00.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_CEAligner.py usr/share/doc/python-biopython-doc/Tests/test_PDB_DSSP.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_Dice.py usr/share/doc/python-biopython-doc/Tests/test_PDB_Disordered.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_Exposure.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_FragmentMapper.py usr/share/doc/python-biopython-doc/Tests/test_PDB_KDTree.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIF2Dict.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIFIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_MMCIFParser.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_NACCESS.py usr/share/doc/python-biopython-doc/Tests/test_PDB_PDBIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_PDBList.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_PDBMLParser.py usr/share/doc/python-biopython-doc/Tests/test_PDB_PDBParser.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_PSEA.py usr/share/doc/python-biopython-doc/Tests/test_PDB_Polypeptide.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_QCPSuperimposer.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_SASA.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_SMCRA.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_Selection.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_StructureAlignment.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_Superimposer.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_alphafold_db.py usr/share/doc/python-biopython-doc/Tests/test_PDB_binary_cif.py usr/share/doc/python-biopython-doc/Tests/test_PDB_internal_coords.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_parse_pdb_header.py.gz usr/share/doc/python-biopython-doc/Tests/test_PDB_vectors.py.gz usr/share/doc/python-biopython-doc/Tests/test_PQR.py.gz usr/share/doc/python-biopython-doc/Tests/test_Pathway.py.gz usr/share/doc/python-biopython-doc/Tests/test_Phd.py.gz usr/share/doc/python-biopython-doc/Tests/test_Phylo.py.gz usr/share/doc/python-biopython-doc/Tests/test_PhyloXML.py.gz usr/share/doc/python-biopython-doc/Tests/test_Phylo_CDAO.py usr/share/doc/python-biopython-doc/Tests/test_Phylo_NeXML.py usr/share/doc/python-biopython-doc/Tests/test_Phylo_igraph.py usr/share/doc/python-biopython-doc/Tests/test_Phylo_matplotlib.py usr/share/doc/python-biopython-doc/Tests/test_Phylo_networkx.py usr/share/doc/python-biopython-doc/Tests/test_PopGen_GenePop_nodepend.py.gz usr/share/doc/python-biopython-doc/Tests/test_ProtParam.py.gz usr/share/doc/python-biopython-doc/Tests/test_RCSBFormats.py usr/share/doc/python-biopython-doc/Tests/test_Restriction.py.gz usr/share/doc/python-biopython-doc/Tests/test_SCOP_Astral.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Cla.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Des.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Dom.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Hie.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Raf.py.gz usr/share/doc/python-biopython-doc/Tests/test_SCOP_Residues.py usr/share/doc/python-biopython-doc/Tests/test_SCOP_Scop.py.gz usr/share/doc/python-biopython-doc/Tests/test_SVDSuperimposer.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_tab_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blast_xml_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blat_psl.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_blat_psl_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate_text_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_exonerate_vulgar_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_fasta_m10.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_fasta_m10_index.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hhsuite2_text.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer2_text_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_domtab_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_tab_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_hmmer3_text_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_infernal_tab.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_infernal_tab_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_infernal_text.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_infernal_text_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_interproscan_xml.py usr/share/doc/python-biopython-doc/Tests/test_SearchIO_model.py.gz usr/share/doc/python-biopython-doc/Tests/test_SearchIO_write.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqFeature.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_AbiIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_FastaIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_Gck.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_Gfa.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_Insdc.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_NibIO.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_PdbIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_QualityIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_SeqXML.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_SffIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_SnapGene.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_TwoBitIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_UniprotIO.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_Xdna.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_features.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_index.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqIO_online.py usr/share/doc/python-biopython-doc/Tests/test_SeqIO_write.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqRecord.py.gz usr/share/doc/python-biopython-doc/Tests/test_SeqUtils.py.gz usr/share/doc/python-biopython-doc/Tests/test_Seq_objs.py.gz usr/share/doc/python-biopython-doc/Tests/test_SwissProt.py.gz usr/share/doc/python-biopython-doc/Tests/test_TogoWS.py.gz usr/share/doc/python-biopython-doc/Tests/test_TreeConstruction.py.gz usr/share/doc/python-biopython-doc/Tests/test_Tutorial.py.gz usr/share/doc/python-biopython-doc/Tests/test_UniGene.py.gz usr/share/doc/python-biopython-doc/Tests/test_UniProt.py usr/share/doc/python-biopython-doc/Tests/test_UniProt_GOA.py.gz usr/share/doc/python-biopython-doc/Tests/test_align.py.gz usr/share/doc/python-biopython-doc/Tests/test_align_substitution_matrices.py.gz usr/share/doc/python-biopython-doc/Tests/test_bgzf.py.gz usr/share/doc/python-biopython-doc/Tests/test_cellosaurus.py.gz usr/share/doc/python-biopython-doc/Tests/test_codonalign.py.gz usr/share/doc/python-biopython-doc/Tests/test_geo.py.gz usr/share/doc/python-biopython-doc/Tests/test_motifs.py.gz usr/share/doc/python-biopython-doc/Tests/test_motifs_online.py usr/share/doc/python-biopython-doc/Tests/test_pairwise2.py usr/share/doc/python-biopython-doc/Tests/test_pairwise2_no_C.py usr/share/doc/python-biopython-doc/Tests/test_pairwise_aligner.py.gz usr/share/doc/python-biopython-doc/Tests/test_pairwise_alignment_map.py.gz usr/share/doc/python-biopython-doc/Tests/test_phenotype.py.gz usr/share/doc/python-biopython-doc/Tests/test_phenotype_fit.py usr/share/doc/python-biopython-doc/Tests/test_prodoc.py.gz usr/share/doc/python-biopython-doc/Tests/test_prosite.py.gz usr/share/doc/python-biopython-doc/Tests/test_seq.py.gz usr/share/doc/python-biopython-doc/Tests/test_translate.py usr/share/doc/python-biopython-doc/Tests_avoid usr/share/doc/python-biopython-doc/Tests_avoid/test_BioSQL_MySQLdb.py usr/share/doc/python-biopython-doc/Tests_avoid/test_BioSQL_psycopg2.py usr/share/doc/python-biopython-doc/Tests_avoid/test_GraphicsBitmaps.py.gz usr/share/doc/python-biopython-doc/Tests_avoid/test_PAML_tools.py.gz usr/share/doc/python-biopython-doc/Tests_avoid/test_PDB_ResidueDepth.py.gz usr/share/doc/python-biopython-doc/Tests_avoid/test_mmtf.py.gz usr/share/doc/python-biopython-doc/Tests_avoid/test_mmtf_online.py usr/share/doc/python-biopython-doc/Tests_fixme usr/share/doc/python-biopython-doc/Tests_fixme/run_failing_tests usr/share/doc/python-biopython-doc/changelog.Debian.gz usr/share/doc/python-biopython-doc/copyright usr/share/doc/python-biopython-doc/examples usr/share/doc/python-biopython-doc/examples/ACT_example.py usr/share/doc/python-biopython-doc/examples/PF05371_seed.sth usr/share/doc/python-biopython-doc/examples/Plates.csv usr/share/doc/python-biopython-doc/examples/Proux_et_al_2002_Figure_6.py usr/share/doc/python-biopython-doc/examples/alpha.faa usr/share/doc/python-biopython-doc/examples/beta.faa usr/share/doc/python-biopython-doc/examples/clustal_run.py usr/share/doc/python-biopython-doc/examples/ec_5.4.2.2.txt usr/share/doc/python-biopython-doc/examples/fasta_dictionary.py usr/share/doc/python-biopython-doc/examples/fasta_iterator.py usr/share/doc/python-biopython-doc/examples/ls_orchid.fasta usr/share/doc/python-biopython-doc/examples/ls_orchid.gbk usr/share/doc/python-biopython-doc/examples/ls_orchid.gbk.bgz usr/share/doc/python-biopython-doc/examples/ls_orchid.gbk.bz2 usr/share/doc/python-biopython-doc/examples/ls_orchid.gbk.gz usr/share/doc/python-biopython-doc/examples/m_cold.fasta usr/share/doc/python-biopython-doc/examples/my_blast.xml usr/share/doc/python-biopython-doc/examples/my_blat.psl usr/share/doc/python-biopython-doc/examples/nmr usr/share/doc/python-biopython-doc/examples/nmr/noed.xpk usr/share/doc/python-biopython-doc/examples/nmr/simplepredict.py usr/share/doc/python-biopython-doc/examples/opuntia.aln usr/share/doc/python-biopython-doc/examples/opuntia.dnd usr/share/doc/python-biopython-doc/examples/opuntia.fasta usr/share/doc/python-biopython-doc/examples/simple.dnd usr/share/doc/python-biopython-doc/examples/swissprot.py usr/share/doc/python-biopython-doc/examples/www_blast.py usr/share/doc/python-biopython-doc/html usr/share/doc/python-biopython-doc/html/.buildinfo usr/share/doc/python-biopython-doc/html/Tutorial usr/share/doc/python-biopython-doc/html/Tutorial/chapter_align.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_appendix.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_bibliography.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_blast.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_cluster.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_contributing.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_cookbook.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_entrez.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_graphics.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_introduction.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_kegg.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_motifs.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_msa.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_pairwise.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_pairwise2.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_pdb.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_phenotype.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_phylo.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_popgen.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_quick_start.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_searchio.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_seq_annot.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_seq_objects.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_seqio.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_testing.html usr/share/doc/python-biopython-doc/html/Tutorial/chapter_uniprot.html usr/share/doc/python-biopython-doc/html/Tutorial/index.html usr/share/doc/python-biopython-doc/html/_images usr/share/doc/python-biopython-doc/html/_images/1a8o-ca-plot.png usr/share/doc/python-biopython-doc/html/_images/BlastRecord.png usr/share/doc/python-biopython-doc/html/_images/GD_sigil_arrow_heads.png usr/share/doc/python-biopython-doc/html/_images/GD_sigil_arrow_shafts.png usr/share/doc/python-biopython-doc/html/_images/GD_sigil_labels.png usr/share/doc/python-biopython-doc/html/_images/GD_sigils.png usr/share/doc/python-biopython-doc/html/_images/PSIBlastRecord.png usr/share/doc/python-biopython-doc/html/_images/SRR001666.png usr/share/doc/python-biopython-doc/html/_images/biopython_logo_m.png usr/share/doc/python-biopython-doc/html/_images/biopython_logo_old.jpg usr/share/doc/python-biopython-doc/html/_images/dot_plot.png usr/share/doc/python-biopython-doc/html/_images/dot_plot_scatter.png usr/share/doc/python-biopython-doc/html/_images/gc_plot.png usr/share/doc/python-biopython-doc/html/_images/hist_plot.png usr/share/doc/python-biopython-doc/html/_images/phe-pairs-3pbl.png usr/share/doc/python-biopython-doc/html/_images/phylo-color-draw.png usr/share/doc/python-biopython-doc/html/_images/phylo-color-iplotx.png usr/share/doc/python-biopython-doc/html/_images/phylo-draw-example.png usr/share/doc/python-biopython-doc/html/_images/phylo-simple-draw.png usr/share/doc/python-biopython-doc/html/_images/plasmid_circular.png usr/share/doc/python-biopython-doc/html/_images/plasmid_circular_nice.png usr/share/doc/python-biopython-doc/html/_images/plasmid_linear.png usr/share/doc/python-biopython-doc/html/_images/plasmid_linear_nice.png usr/share/doc/python-biopython-doc/html/_images/simple_chrom.png usr/share/doc/python-biopython-doc/html/_images/smcra.png usr/share/doc/python-biopython-doc/html/_images/tRNA_chrom.png usr/share/doc/python-biopython-doc/html/_images/three_track_cl.png usr/share/doc/python-biopython-doc/html/_images/three_track_cl2a.png usr/share/doc/python-biopython-doc/html/_images/three_track_simple.png usr/share/doc/python-biopython-doc/html/_static usr/share/doc/python-biopython-doc/html/_static/_sphinx_javascript_frameworks_compat.js usr/share/doc/python-biopython-doc/html/_static/base-stemmer.js usr/share/doc/python-biopython-doc/html/_static/basic.css usr/share/doc/python-biopython-doc/html/_static/biopython.css usr/share/doc/python-biopython-doc/html/_static/biopython_logo.svg usr/share/doc/python-biopython-doc/html/_static/css usr/share/doc/python-biopython-doc/html/_static/css/badge_only.css usr/share/doc/python-biopython-doc/html/_static/css/theme.css usr/share/doc/python-biopython-doc/html/_static/documentation_options.js usr/share/doc/python-biopython-doc/html/_static/english-stemmer.js usr/share/doc/python-biopython-doc/html/_static/file.png usr/share/doc/python-biopython-doc/html/_static/js usr/share/doc/python-biopython-doc/html/_static/js/theme.js usr/share/doc/python-biopython-doc/html/_static/js/versions.js usr/share/doc/python-biopython-doc/html/_static/minus.png usr/share/doc/python-biopython-doc/html/_static/plus.png usr/share/doc/python-biopython-doc/html/_static/pygments.css usr/share/doc/python-biopython-doc/html/_static/sphinx_highlight.js usr/share/doc/python-biopython-doc/html/api usr/share/doc/python-biopython-doc/html/api/Bio.Affy.CelFile.html usr/share/doc/python-biopython-doc/html/api/Bio.Affy.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.AlignInfo.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.a2m.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.analysis.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.bed.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.bigbed.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.bigmaf.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.bigpsl.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.chain.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.clustal.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.emboss.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.exonerate.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.fasta.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.hhr.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.interfaces.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.maf.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.mauve.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.msf.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.nexus.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.phylip.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.psl.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.sam.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.stockholm.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.substitution_matrices.html usr/share/doc/python-biopython-doc/html/api/Bio.Align.tabular.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.ClustalIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.EmbossIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.FastaIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.Interfaces.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.MafIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.MauveIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.MsfIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.NexusIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.PhylipIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.StockholmIO.html usr/share/doc/python-biopython-doc/html/api/Bio.AlignIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Blast.NCBIWWW.html usr/share/doc/python-biopython-doc/html/api/Bio.Blast.NCBIXML.html usr/share/doc/python-biopython-doc/html/api/Bio.Blast.html usr/share/doc/python-biopython-doc/html/api/Bio.CAPS.html usr/share/doc/python-biopython-doc/html/api/Bio.Cluster.html usr/share/doc/python-biopython-doc/html/api/Bio.Compass.html usr/share/doc/python-biopython-doc/html/api/Bio.Data.CodonTable.html usr/share/doc/python-biopython-doc/html/api/Bio.Data.IUPACData.html usr/share/doc/python-biopython-doc/html/api/Bio.Data.PDBData.html usr/share/doc/python-biopython-doc/html/api/Bio.Data.html usr/share/doc/python-biopython-doc/html/api/Bio.Emboss.Primer3.html usr/share/doc/python-biopython-doc/html/api/Bio.Emboss.PrimerSearch.html usr/share/doc/python-biopython-doc/html/api/Bio.Emboss.html usr/share/doc/python-biopython-doc/html/api/Bio.Entrez.Parser.html usr/share/doc/python-biopython-doc/html/api/Bio.Entrez.html usr/share/doc/python-biopython-doc/html/api/Bio.ExPASy.Enzyme.html usr/share/doc/python-biopython-doc/html/api/Bio.ExPASy.Prodoc.html usr/share/doc/python-biopython-doc/html/api/Bio.ExPASy.Prosite.html usr/share/doc/python-biopython-doc/html/api/Bio.ExPASy.ScanProsite.html usr/share/doc/python-biopython-doc/html/api/Bio.ExPASy.cellosaurus.html usr/share/doc/python-biopython-doc/html/api/Bio.ExPASy.html usr/share/doc/python-biopython-doc/html/api/Bio.File.html usr/share/doc/python-biopython-doc/html/api/Bio.GenBank.Record.html usr/share/doc/python-biopython-doc/html/api/Bio.GenBank.Scanner.html usr/share/doc/python-biopython-doc/html/api/Bio.GenBank.html usr/share/doc/python-biopython-doc/html/api/Bio.GenBank.utils.html usr/share/doc/python-biopython-doc/html/api/Bio.Geo.Record.html usr/share/doc/python-biopython-doc/html/api/Bio.Geo.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.BasicChromosome.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.ColorSpiral.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.Comparative.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.DisplayRepresentation.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.Distribution.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.GenomeDiagram.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.KGML_vis.html usr/share/doc/python-biopython-doc/html/api/Bio.Graphics.html usr/share/doc/python-biopython-doc/html/api/Bio.HMM.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.Compound.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.Enzyme.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.Gene.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.KGML.KGML_parser.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.KGML.KGML_pathway.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.KGML.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.Map.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.REST.html usr/share/doc/python-biopython-doc/html/api/Bio.KEGG.html usr/share/doc/python-biopython-doc/html/api/Bio.Medline.html usr/share/doc/python-biopython-doc/html/api/Bio.NMR.NOEtools.html usr/share/doc/python-biopython-doc/html/api/Bio.NMR.html usr/share/doc/python-biopython-doc/html/api/Bio.NMR.xpktools.html usr/share/doc/python-biopython-doc/html/api/Bio.Nexus.Nexus.html usr/share/doc/python-biopython-doc/html/api/Bio.Nexus.Nodes.html usr/share/doc/python-biopython-doc/html/api/Bio.Nexus.StandardData.html usr/share/doc/python-biopython-doc/html/api/Bio.Nexus.Trees.html usr/share/doc/python-biopython-doc/html/api/Bio.Nexus.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.AbstractPropertyMap.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Atom.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Chain.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.DSSP.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Dice.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Entity.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.FragmentMapper.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.HSExposure.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.MMCIF2Dict.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.MMCIFParser.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Model.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.NACCESS.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.NeighborSearch.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PDBExceptions.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PDBIO.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PDBList.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PDBMLParser.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PDBParser.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PICIO.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.PSEA.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Polypeptide.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Residue.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.ResidueDepth.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.SASA.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.SCADIO.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Selection.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Structure.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.StructureAlignment.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.StructureBuilder.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.Superimposer.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.alphafold_db.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.binary_cif.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.cealign.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.ic_data.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.ic_rebuild.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.internal_coords.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.mmcifio.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.mmtf.DefaultParser.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.mmtf.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.mmtf.mmtfio.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.parse_pdb_header.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.qcprot.html usr/share/doc/python-biopython-doc/html/api/Bio.PDB.vectors.html usr/share/doc/python-biopython-doc/html/api/Bio.Pathway.Rep.Graph.html usr/share/doc/python-biopython-doc/html/api/Bio.Pathway.Rep.MultiGraph.html usr/share/doc/python-biopython-doc/html/api/Bio.Pathway.Rep.html usr/share/doc/python-biopython-doc/html/api/Bio.Pathway.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.BaseTree.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.CDAO.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.CDAOIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.Consensus.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.NeXML.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.NeXMLIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.Newick.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.NewickIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.NexusIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PAML.baseml.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PAML.chi2.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PAML.codeml.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PAML.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PAML.yn00.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PhyloXML.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.PhyloXMLIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.TreeConstruction.html usr/share/doc/python-biopython-doc/html/api/Bio.Phylo.html usr/share/doc/python-biopython-doc/html/api/Bio.PopGen.GenePop.FileParser.html usr/share/doc/python-biopython-doc/html/api/Bio.PopGen.GenePop.LargeFileParser.html usr/share/doc/python-biopython-doc/html/api/Bio.PopGen.GenePop.html usr/share/doc/python-biopython-doc/html/api/Bio.PopGen.html usr/share/doc/python-biopython-doc/html/api/Bio.Restriction.PrintFormat.html usr/share/doc/python-biopython-doc/html/api/Bio.Restriction.Restriction_Dictionary.html usr/share/doc/python-biopython-doc/html/api/Bio.Restriction.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.Cla.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.Des.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.Dom.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.Hie.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.Raf.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.Residues.html usr/share/doc/python-biopython-doc/html/api/Bio.SCOP.html usr/share/doc/python-biopython-doc/html/api/Bio.SVDSuperimposer.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.BlastIO.blast_tab.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.BlastIO.blast_xml.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.BlastIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.BlatIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.ExonerateIO.exonerate_cigar.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.ExonerateIO.exonerate_text.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.ExonerateIO.exonerate_vulgar.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.ExonerateIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.FastaIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HHsuiteIO.hhsuite2_text.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HHsuiteIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HmmerIO.hmmer2_text.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HmmerIO.hmmer3_domtab.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HmmerIO.hmmer3_tab.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HmmerIO.hmmer3_text.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.HmmerIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.InfernalIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.InfernalIO.infernal_tab.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.InfernalIO.infernal_text.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.InterproscanIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.InterproscanIO.interproscan_xml.html usr/share/doc/python-biopython-doc/html/api/Bio.SearchIO.html usr/share/doc/python-biopython-doc/html/api/Bio.Seq.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqFeature.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.AbiIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.AceIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.FastaIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.GckIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.GfaIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.IgIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.InsdcIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.Interfaces.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.NibIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.PdbIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.PhdIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.PirIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.QualityIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.SeqXmlIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.SffIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.SnapGeneIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.SwissIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.TabIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.TwoBitIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.UniprotIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.XdnaIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqIO.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqRecord.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.CheckSum.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.IsoelectricPoint.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.MeltingTemp.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.ProtParam.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.ProtParamData.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.html usr/share/doc/python-biopython-doc/html/api/Bio.SeqUtils.lcc.html usr/share/doc/python-biopython-doc/html/api/Bio.Sequencing.Ace.html usr/share/doc/python-biopython-doc/html/api/Bio.Sequencing.Phd.html usr/share/doc/python-biopython-doc/html/api/Bio.Sequencing.html usr/share/doc/python-biopython-doc/html/api/Bio.SwissProt.KeyWList.html usr/share/doc/python-biopython-doc/html/api/Bio.SwissProt.html usr/share/doc/python-biopython-doc/html/api/Bio.TogoWS.html usr/share/doc/python-biopython-doc/html/api/Bio.UniGene.html usr/share/doc/python-biopython-doc/html/api/Bio.UniProt.GOA.html usr/share/doc/python-biopython-doc/html/api/Bio.UniProt.html usr/share/doc/python-biopython-doc/html/api/Bio.bgzf.html usr/share/doc/python-biopython-doc/html/api/Bio.codonalign.codonalignment.html usr/share/doc/python-biopython-doc/html/api/Bio.codonalign.codonseq.html usr/share/doc/python-biopython-doc/html/api/Bio.codonalign.html usr/share/doc/python-biopython-doc/html/api/Bio.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.alignace.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.clusterbuster.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.jaspar.db.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.jaspar.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.mast.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.matrix.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.meme.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.minimal.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.pfm.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.thresholds.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.transfac.html usr/share/doc/python-biopython-doc/html/api/Bio.motifs.xms.html usr/share/doc/python-biopython-doc/html/api/Bio.pairwise2.html usr/share/doc/python-biopython-doc/html/api/Bio.phenotype.html usr/share/doc/python-biopython-doc/html/api/Bio.phenotype.phen_micro.html usr/share/doc/python-biopython-doc/html/api/Bio.phenotype.pm_fitting.html usr/share/doc/python-biopython-doc/html/api/BioSQL.BioSeq.html usr/share/doc/python-biopython-doc/html/api/BioSQL.BioSeqDatabase.html usr/share/doc/python-biopython-doc/html/api/BioSQL.DBUtils.html usr/share/doc/python-biopython-doc/html/api/BioSQL.Loader.html usr/share/doc/python-biopython-doc/html/api/BioSQL.html usr/share/doc/python-biopython-doc/html/api/index.html usr/share/doc/python-biopython-doc/html/genindex.html usr/share/doc/python-biopython-doc/html/index.html usr/share/doc/python-biopython-doc/html/objects.inv usr/share/doc/python-biopython-doc/html/py-modindex.html usr/share/doc/python-biopython-doc/html/search.html usr/share/doc/python-biopython-doc/html/searchindex.js usr/share/doc/python-biopython-doc/run-unit-test usr/share/doc-base usr/share/doc-base/python-biopython-doc.biopython-tutorial usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/python-biopython-doc usr/share/doc/python-biopython-doc/html/_static/doctools.js usr/share/doc/python-biopython-doc/html/_static/jquery.js usr/share/doc/python-biopython-doc/html/_static/language_data.js usr/share/doc/python-biopython-doc/html/_static/searchtools.js