python3-bioregistry (0.11.12-3)

Details

Core information at a glance

Distribution
debian
Origin
debian-forky
Repository
https://deb.debian.org/debian
Codename
forky
Component
main
Source
python-bioregistry
Architecture
s390x
Section
python
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
22.1 kB
Size expected
3.9 MB
Size actual
3.9 MB
Size match

Dependencies

Required package dependencies

  • python3-click
  • python3-curies
  • python3-pydantic
  • python3-pystow
  • python3-requests
  • python3-tqdm
  • python3:any

Suggested packages

Recommended additional packages

  • node-prismjs
  • libjs-jquery-datatables
  • libjs-vue

Description

community curated registry, meta-registry, and compact identifier resolver

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD54a8b79a0…af499b73
SHA-191454228…3c5b9fa4
SHA-25654297daf…568cb5e2
SHA-512136fc6ba…ff00e898

Contents

Files and directories included

.
usr
usr/bin
usr/bin/bioregistry
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/bioregistry
usr/lib/python3/dist-packages/bioregistry/__init__.py
usr/lib/python3/dist-packages/bioregistry/__main__.py
usr/lib/python3/dist-packages/bioregistry/analysis
usr/lib/python3/dist-packages/bioregistry/analysis/__init__.py
usr/lib/python3/dist-packages/bioregistry/analysis/bioregistry_diff.py
usr/lib/python3/dist-packages/bioregistry/analysis/paper_ranking.py
usr/lib/python3/dist-packages/bioregistry/analysis/paper_ranking_requirements.txt
usr/lib/python3/dist-packages/bioregistry/app
usr/lib/python3/dist-packages/bioregistry/app/__init__.py
usr/lib/python3/dist-packages/bioregistry/app/api.py
usr/lib/python3/dist-packages/bioregistry/app/cli.py
usr/lib/python3/dist-packages/bioregistry/app/constants.py
usr/lib/python3/dist-packages/bioregistry/app/impl.py
usr/lib/python3/dist-packages/bioregistry/app/proxies.py
usr/lib/python3/dist-packages/bioregistry/app/static
usr/lib/python3/dist-packages/bioregistry/app/static/logo.svg
usr/lib/python3/dist-packages/bioregistry/app/templates
usr/lib/python3/dist-packages/bioregistry/app/templates/base.html
usr/lib/python3/dist-packages/bioregistry/app/templates/collection.html
usr/lib/python3/dist-packages/bioregistry/app/templates/collections.html
usr/lib/python3/dist-packages/bioregistry/app/templates/context.html
usr/lib/python3/dist-packages/bioregistry/app/templates/contexts.html
usr/lib/python3/dist-packages/bioregistry/app/templates/contributor.html
usr/lib/python3/dist-packages/bioregistry/app/templates/contributors.html
usr/lib/python3/dist-packages/bioregistry/app/templates/highlights
usr/lib/python3/dist-packages/bioregistry/app/templates/highlights/keywords.html
usr/lib/python3/dist-packages/bioregistry/app/templates/highlights/owners.html
usr/lib/python3/dist-packages/bioregistry/app/templates/highlights/relations.html
usr/lib/python3/dist-packages/bioregistry/app/templates/highlights/twitter.html
usr/lib/python3/dist-packages/bioregistry/app/templates/home.html
usr/lib/python3/dist-packages/bioregistry/app/templates/macros.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/access.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/acknowledgements.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/bibliography_years.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/bioregistry_coverage.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/bioregistry_coverage_bar.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/bioregistry_coverage_bar_short.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/datamodel_umls.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/download.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/external_overlap.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/has_attribute.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/providers.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/regex_report.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/related.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/schema.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/summary.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/sustainability.html
usr/lib/python3/dist-packages/bioregistry/app/templates/meta/xrefs.svg
usr/lib/python3/dist-packages/bioregistry/app/templates/metaresource.html
usr/lib/python3/dist-packages/bioregistry/app/templates/metaresources.html
usr/lib/python3/dist-packages/bioregistry/app/templates/prose.html
usr/lib/python3/dist-packages/bioregistry/app/templates/reference.html
usr/lib/python3/dist-packages/bioregistry/app/templates/resolve_errors
usr/lib/python3/dist-packages/bioregistry/app/templates/resolve_errors/disallowed_identifier.html
usr/lib/python3/dist-packages/bioregistry/app/templates/resolve_errors/invalid_identifier.html
usr/lib/python3/dist-packages/bioregistry/app/templates/resolve_errors/missing_prefix.html
usr/lib/python3/dist-packages/bioregistry/app/templates/resolve_errors/missing_providers.html
usr/lib/python3/dist-packages/bioregistry/app/templates/resource.html
usr/lib/python3/dist-packages/bioregistry/app/templates/resources.html
usr/lib/python3/dist-packages/bioregistry/app/test.py
usr/lib/python3/dist-packages/bioregistry/app/ui.py
usr/lib/python3/dist-packages/bioregistry/app/utils.py
usr/lib/python3/dist-packages/bioregistry/app/wsgi.py
usr/lib/python3/dist-packages/bioregistry/benchmarks
usr/lib/python3/dist-packages/bioregistry/benchmarks/__init__.py
usr/lib/python3/dist-packages/bioregistry/benchmarks/__main__.py
usr/lib/python3/dist-packages/bioregistry/benchmarks/cli.py
usr/lib/python3/dist-packages/bioregistry/benchmarks/curie_parsing.py
usr/lib/python3/dist-packages/bioregistry/benchmarks/curie_validation.py
usr/lib/python3/dist-packages/bioregistry/benchmarks/uri_parsing.py
usr/lib/python3/dist-packages/bioregistry/bibliometrics.py
usr/lib/python3/dist-packages/bioregistry/cli.py
usr/lib/python3/dist-packages/bioregistry/collection_api.py
usr/lib/python3/dist-packages/bioregistry/compare.py
usr/lib/python3/dist-packages/bioregistry/constants.py
usr/lib/python3/dist-packages/bioregistry/curation
usr/lib/python3/dist-packages/bioregistry/curation/__init__.py
usr/lib/python3/dist-packages/bioregistry/curation/add_co_providers.py
usr/lib/python3/dist-packages/bioregistry/curation/add_descriptions_from_gs.py
usr/lib/python3/dist-packages/bioregistry/curation/add_examples.py
usr/lib/python3/dist-packages/bioregistry/curation/add_examples_from_javert.py
usr/lib/python3/dist-packages/bioregistry/curation/add_examples_from_ols.py
usr/lib/python3/dist-packages/bioregistry/curation/add_ontology_regexes.py
usr/lib/python3/dist-packages/bioregistry/curation/bulk_import.py
usr/lib/python3/dist-packages/bioregistry/curation/clean_licenses.py
usr/lib/python3/dist-packages/bioregistry/curation/clean_name_suffixes.py
usr/lib/python3/dist-packages/bioregistry/curation/clean_publications.py
usr/lib/python3/dist-packages/bioregistry/curation/cleanup_authors.py
usr/lib/python3/dist-packages/bioregistry/curation/curated_papers.csv
usr/lib/python3/dist-packages/bioregistry/curation/deprecation_diff.py
usr/lib/python3/dist-packages/bioregistry/curation/enrich_publications.py
usr/lib/python3/dist-packages/bioregistry/curation/fix_obo_purls.py
usr/lib/python3/dist-packages/bioregistry/curation/import_pc_semiautomatic.py
usr/lib/python3/dist-packages/bioregistry/curation/make_description_curation_sheet.py
usr/lib/python3/dist-packages/bioregistry/curation/make_health_report_curation_sheet.py
usr/lib/python3/dist-packages/bioregistry/curation/map_bartoc_via_wikidata.py
usr/lib/python3/dist-packages/bioregistry/curation/map_re3data_via_fairsharing.py
usr/lib/python3/dist-packages/bioregistry/curation/rename_metaprefix.py
usr/lib/python3/dist-packages/bioregistry/curation/review_pc.py
usr/lib/python3/dist-packages/bioregistry/curation/suggest_author_curation.py
usr/lib/python3/dist-packages/bioregistry/curation/suggest_uniprot_providers.py
usr/lib/python3/dist-packages/bioregistry/data
usr/lib/python3/dist-packages/bioregistry/data/README.md
usr/lib/python3/dist-packages/bioregistry/data/__init__.py
usr/lib/python3/dist-packages/bioregistry/data/bioregistry.json
usr/lib/python3/dist-packages/bioregistry/data/collections.json
usr/lib/python3/dist-packages/bioregistry/data/contexts.json
usr/lib/python3/dist-packages/bioregistry/data/metaregistry.json
usr/lib/python3/dist-packages/bioregistry/data/mismatch.json
usr/lib/python3/dist-packages/bioregistry/export
usr/lib/python3/dist-packages/bioregistry/export/__init__.py
usr/lib/python3/dist-packages/bioregistry/export/__main__.py
usr/lib/python3/dist-packages/bioregistry/export/cli.py
usr/lib/python3/dist-packages/bioregistry/export/prefix_maps.py
usr/lib/python3/dist-packages/bioregistry/export/prefixcc.py
usr/lib/python3/dist-packages/bioregistry/export/rdf_export.py
usr/lib/python3/dist-packages/bioregistry/export/schema_export.py
usr/lib/python3/dist-packages/bioregistry/export/sssom_export.py
usr/lib/python3/dist-packages/bioregistry/export/tables_export.py
usr/lib/python3/dist-packages/bioregistry/export/tsv_export.py
usr/lib/python3/dist-packages/bioregistry/export/warnings_export.py
usr/lib/python3/dist-packages/bioregistry/export/yaml_export.py
usr/lib/python3/dist-packages/bioregistry/external
usr/lib/python3/dist-packages/bioregistry/external/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/aberowl
usr/lib/python3/dist-packages/bioregistry/external/aberowl/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/aberowl/processed.json
usr/lib/python3/dist-packages/bioregistry/external/align.py
usr/lib/python3/dist-packages/bioregistry/external/alignment_utils.py
usr/lib/python3/dist-packages/bioregistry/external/bartoc
usr/lib/python3/dist-packages/bioregistry/external/bartoc/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/bartoc/processed.json
usr/lib/python3/dist-packages/bioregistry/external/biocontext
usr/lib/python3/dist-packages/bioregistry/external/biocontext/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/biocontext/processed.json
usr/lib/python3/dist-packages/bioregistry/external/biolink
usr/lib/python3/dist-packages/bioregistry/external/biolink/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/biolink/processed.json
usr/lib/python3/dist-packages/bioregistry/external/biolink/processing_biolink.json
usr/lib/python3/dist-packages/bioregistry/external/bioportal
usr/lib/python3/dist-packages/bioregistry/external/bioportal/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/bioportal/agroportal.json
usr/lib/python3/dist-packages/bioregistry/external/bioportal/agroportal.py
usr/lib/python3/dist-packages/bioregistry/external/bioportal/bioportal.json
usr/lib/python3/dist-packages/bioregistry/external/bioportal/bioportal.py
usr/lib/python3/dist-packages/bioregistry/external/bioportal/ecoportal.json
usr/lib/python3/dist-packages/bioregistry/external/bioportal/ecoportal.py
usr/lib/python3/dist-packages/bioregistry/external/cellosaurus
usr/lib/python3/dist-packages/bioregistry/external/cellosaurus/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/cellosaurus/processed.json
usr/lib/python3/dist-packages/bioregistry/external/cheminf
usr/lib/python3/dist-packages/bioregistry/external/cheminf/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/cheminf/processed.json
usr/lib/python3/dist-packages/bioregistry/external/cropoct
usr/lib/python3/dist-packages/bioregistry/external/cropoct/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/cropoct/processed.json
usr/lib/python3/dist-packages/bioregistry/external/edam
usr/lib/python3/dist-packages/bioregistry/external/edam/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/edam/processed.json
usr/lib/python3/dist-packages/bioregistry/external/fairsharing
usr/lib/python3/dist-packages/bioregistry/external/fairsharing/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/fairsharing/processed.json
usr/lib/python3/dist-packages/bioregistry/external/go
usr/lib/python3/dist-packages/bioregistry/external/go/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/go/processed.json
usr/lib/python3/dist-packages/bioregistry/external/go/processing_go.json
usr/lib/python3/dist-packages/bioregistry/external/hl7
usr/lib/python3/dist-packages/bioregistry/external/hl7/OID_Report.csv
usr/lib/python3/dist-packages/bioregistry/external/hl7/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/integbio
usr/lib/python3/dist-packages/bioregistry/external/integbio/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/integbio/processed.json
usr/lib/python3/dist-packages/bioregistry/external/lov
usr/lib/python3/dist-packages/bioregistry/external/lov/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/lov/processed.json
usr/lib/python3/dist-packages/bioregistry/external/miriam
usr/lib/python3/dist-packages/bioregistry/external/miriam/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/miriam/processed.json
usr/lib/python3/dist-packages/bioregistry/external/n2t
usr/lib/python3/dist-packages/bioregistry/external/n2t/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/n2t/processed.json
usr/lib/python3/dist-packages/bioregistry/external/ncbi
usr/lib/python3/dist-packages/bioregistry/external/ncbi/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/ncbi/processed.json
usr/lib/python3/dist-packages/bioregistry/external/obofoundry
usr/lib/python3/dist-packages/bioregistry/external/obofoundry/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/obofoundry/processed.json
usr/lib/python3/dist-packages/bioregistry/external/ols
usr/lib/python3/dist-packages/bioregistry/external/ols/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/ols/processed.json
usr/lib/python3/dist-packages/bioregistry/external/ols/processing_ols.json
usr/lib/python3/dist-packages/bioregistry/external/ontobee
usr/lib/python3/dist-packages/bioregistry/external/ontobee/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/ontobee/processed.json
usr/lib/python3/dist-packages/bioregistry/external/pathguide
usr/lib/python3/dist-packages/bioregistry/external/pathguide/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/prefixcommons
usr/lib/python3/dist-packages/bioregistry/external/prefixcommons/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/prefixcommons/processed.json
usr/lib/python3/dist-packages/bioregistry/external/re3data
usr/lib/python3/dist-packages/bioregistry/external/re3data/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/re3data/processed.json
usr/lib/python3/dist-packages/bioregistry/external/rrid
usr/lib/python3/dist-packages/bioregistry/external/rrid/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/togoid
usr/lib/python3/dist-packages/bioregistry/external/togoid/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/togoid/processed.json
usr/lib/python3/dist-packages/bioregistry/external/uniprot
usr/lib/python3/dist-packages/bioregistry/external/uniprot/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/uniprot/processed.json
usr/lib/python3/dist-packages/bioregistry/external/wikidata
usr/lib/python3/dist-packages/bioregistry/external/wikidata/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/wikidata/processed.json
usr/lib/python3/dist-packages/bioregistry/external/zazuko
usr/lib/python3/dist-packages/bioregistry/external/zazuko/__init__.py
usr/lib/python3/dist-packages/bioregistry/external/zazuko/processed.json
usr/lib/python3/dist-packages/bioregistry/gh
usr/lib/python3/dist-packages/bioregistry/gh/__init__.py
usr/lib/python3/dist-packages/bioregistry/gh/github_client.py
usr/lib/python3/dist-packages/bioregistry/gh/new_prefix.py
usr/lib/python3/dist-packages/bioregistry/health
usr/lib/python3/dist-packages/bioregistry/health/__init__.py
usr/lib/python3/dist-packages/bioregistry/health/__main__.py
usr/lib/python3/dist-packages/bioregistry/health/check_homepages.py
usr/lib/python3/dist-packages/bioregistry/health/check_providers.py
usr/lib/python3/dist-packages/bioregistry/health/cli.py
usr/lib/python3/dist-packages/bioregistry/license_standardizer.py
usr/lib/python3/dist-packages/bioregistry/lint.py
usr/lib/python3/dist-packages/bioregistry/metaresource_api.py
usr/lib/python3/dist-packages/bioregistry/pandas.py
usr/lib/python3/dist-packages/bioregistry/parse_iri.py
usr/lib/python3/dist-packages/bioregistry/parse_version_iri.py
usr/lib/python3/dist-packages/bioregistry/py.typed
usr/lib/python3/dist-packages/bioregistry/record_accumulator.py
usr/lib/python3/dist-packages/bioregistry/resolve.py
usr/lib/python3/dist-packages/bioregistry/resolve_identifier.py
usr/lib/python3/dist-packages/bioregistry/resource_manager.py
usr/lib/python3/dist-packages/bioregistry/schema
usr/lib/python3/dist-packages/bioregistry/schema/__init__.py
usr/lib/python3/dist-packages/bioregistry/schema/constants.py
usr/lib/python3/dist-packages/bioregistry/schema/schema.json
usr/lib/python3/dist-packages/bioregistry/schema/struct.py
usr/lib/python3/dist-packages/bioregistry/schema/utils.py
usr/lib/python3/dist-packages/bioregistry/schema_utils.py
usr/lib/python3/dist-packages/bioregistry/summary.py
usr/lib/python3/dist-packages/bioregistry/upload_ndex.py
usr/lib/python3/dist-packages/bioregistry/uri_format.py
usr/lib/python3/dist-packages/bioregistry/utils.py
usr/lib/python3/dist-packages/bioregistry/version.py
usr/lib/python3/dist-packages/bioregistry-0.11.12.dist-info
usr/lib/python3/dist-packages/bioregistry-0.11.12.dist-info/INSTALLER
usr/lib/python3/dist-packages/bioregistry-0.11.12.dist-info/METADATA
usr/lib/python3/dist-packages/bioregistry-0.11.12.dist-info/WHEEL
usr/lib/python3/dist-packages/bioregistry-0.11.12.dist-info/entry_points.txt
usr/lib/python3/dist-packages/bioregistry-0.11.12.dist-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/python3-bioregistry
usr/share/doc/python3-bioregistry/changelog.Debian.gz
usr/share/doc/python3-bioregistry/copyright