python3-gffutils (0.13-5)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-forky
- Repository
- https://deb.debian.org/debian
- Codename
- forky
- Component
- main
- Source
- python-gffutils
- Architecture
- s390x
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 9.8 kB
- Size expected
- 1 MB
- Size actual
- 1 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
Work with GFF and GTF files in a flexible database framework
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 6bebf501…e891cf9a | |
| SHA-1 | 5bb5511a…9b5bd57d | |
| SHA-256 | 8268c6bb…2ee231c0 | |
| SHA-512 | c804a1da…95aa58b1 |
Contents
Files and directories included
. usr usr/bin usr/bin/gffutils-cli usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/gffutils usr/lib/python3/dist-packages/gffutils/__init__.py usr/lib/python3/dist-packages/gffutils/attributes.py usr/lib/python3/dist-packages/gffutils/bins.py usr/lib/python3/dist-packages/gffutils/biopython_integration.py usr/lib/python3/dist-packages/gffutils/constants.py usr/lib/python3/dist-packages/gffutils/convert.py usr/lib/python3/dist-packages/gffutils/create.py usr/lib/python3/dist-packages/gffutils/exceptions.py usr/lib/python3/dist-packages/gffutils/feature.py usr/lib/python3/dist-packages/gffutils/gffwriter.py usr/lib/python3/dist-packages/gffutils/helpers.py usr/lib/python3/dist-packages/gffutils/inspect.py usr/lib/python3/dist-packages/gffutils/interface.py usr/lib/python3/dist-packages/gffutils/iterators.py usr/lib/python3/dist-packages/gffutils/merge_criteria.py usr/lib/python3/dist-packages/gffutils/parser.py usr/lib/python3/dist-packages/gffutils/pybedtools_integration.py usr/lib/python3/dist-packages/gffutils/scripts usr/lib/python3/dist-packages/gffutils/scripts/gffutils-flybase-convert.py usr/lib/python3/dist-packages/gffutils/test usr/lib/python3/dist-packages/gffutils/test/__init__.py usr/lib/python3/dist-packages/gffutils/test/attr_test_cases.py usr/lib/python3/dist-packages/gffutils/test/conftest.py usr/lib/python3/dist-packages/gffutils/test/data usr/lib/python3/dist-packages/gffutils/test/data/F3-unique-3.v2.gff usr/lib/python3/dist-packages/gffutils/test/data/FBgn0031208.gff usr/lib/python3/dist-packages/gffutils/test/data/FBgn0031208.gtf usr/lib/python3/dist-packages/gffutils/test/data/FBgn0031208.gtf.db usr/lib/python3/dist-packages/gffutils/test/data/FBgn0031208.gtf.db.orig usr/lib/python3/dist-packages/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt usr/lib/python3/dist-packages/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt usr/lib/python3/dist-packages/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt usr/lib/python3/dist-packages/gffutils/test/data/c_elegans_WS199_ann_gff.txt usr/lib/python3/dist-packages/gffutils/test/data/c_elegans_WS199_dna_shortened.fa usr/lib/python3/dist-packages/gffutils/test/data/c_elegans_WS199_shortened_gff.txt usr/lib/python3/dist-packages/gffutils/test/data/dm6-chr2L.fa usr/lib/python3/dist-packages/gffutils/test/data/dm6-chr2L.fa.fai usr/lib/python3/dist-packages/gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff usr/lib/python3/dist-packages/gffutils/test/data/download-large-annotation-files.sh usr/lib/python3/dist-packages/gffutils/test/data/ensembl_gtf.txt usr/lib/python3/dist-packages/gffutils/test/data/gencode-v19.gtf usr/lib/python3/dist-packages/gffutils/test/data/gencode.vM8.5000_gene_ids.txt usr/lib/python3/dist-packages/gffutils/test/data/gencode.vM8.5000_transcript_ids.txt usr/lib/python3/dist-packages/gffutils/test/data/gencode.vM8.chromsizes.txt usr/lib/python3/dist-packages/gffutils/test/data/gff_example1.gff3 usr/lib/python3/dist-packages/gffutils/test/data/gff_example1.gff3.gz usr/lib/python3/dist-packages/gffutils/test/data/glimmer_nokeyval.gff3 usr/lib/python3/dist-packages/gffutils/test/data/gms2_example.gff3 usr/lib/python3/dist-packages/gffutils/test/data/hybrid1.gff3 usr/lib/python3/dist-packages/gffutils/test/data/intro_docs_example.gff usr/lib/python3/dist-packages/gffutils/test/data/issue167.gff usr/lib/python3/dist-packages/gffutils/test/data/issue174.gtf usr/lib/python3/dist-packages/gffutils/test/data/issue_197.gff usr/lib/python3/dist-packages/gffutils/test/data/jgi_gff2.txt usr/lib/python3/dist-packages/gffutils/test/data/keep-order-test.gtf usr/lib/python3/dist-packages/gffutils/test/data/keyval_sep_in_attrs.gff usr/lib/python3/dist-packages/gffutils/test/data/mouse_extra_comma.gff3 usr/lib/python3/dist-packages/gffutils/test/data/ncbi_gff3.txt usr/lib/python3/dist-packages/gffutils/test/data/nonascii usr/lib/python3/dist-packages/gffutils/test/data/random-chr.gff usr/lib/python3/dist-packages/gffutils/test/data/sharr.gtf usr/lib/python3/dist-packages/gffutils/test/data/synthetic.gff3 usr/lib/python3/dist-packages/gffutils/test/data/unsanitized.gff usr/lib/python3/dist-packages/gffutils/test/data/wormbase_gff2.txt usr/lib/python3/dist-packages/gffutils/test/data/wormbase_gff2_alt.txt usr/lib/python3/dist-packages/gffutils/test/expected.py usr/lib/python3/dist-packages/gffutils/test/feature_test.py usr/lib/python3/dist-packages/gffutils/test/helpers_test.py usr/lib/python3/dist-packages/gffutils/test/parser_test.py usr/lib/python3/dist-packages/gffutils/test/performance_evaluation.py usr/lib/python3/dist-packages/gffutils/test/synth_test_base.py usr/lib/python3/dist-packages/gffutils/test/test_1.py usr/lib/python3/dist-packages/gffutils/test/test_biopython_integration.py usr/lib/python3/dist-packages/gffutils/test/test_cli.py usr/lib/python3/dist-packages/gffutils/test/test_issues.py usr/lib/python3/dist-packages/gffutils/test/test_iterators.py usr/lib/python3/dist-packages/gffutils/test/test_merge.py usr/lib/python3/dist-packages/gffutils/test/test_merge_all.py usr/lib/python3/dist-packages/gffutils/version.py usr/lib/python3/dist-packages/gffutils-0.13.egg-info usr/lib/python3/dist-packages/gffutils-0.13.egg-info/PKG-INFO usr/lib/python3/dist-packages/gffutils-0.13.egg-info/dependency_links.txt usr/lib/python3/dist-packages/gffutils-0.13.egg-info/requires.txt usr/lib/python3/dist-packages/gffutils-0.13.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/python3-gffutils usr/share/doc/python3-gffutils/README.Debian usr/share/doc/python3-gffutils/README.test usr/share/doc/python3-gffutils/changelog.Debian.gz usr/share/doc/python3-gffutils/copyright usr/share/doc/python3-gffutils/run-unit-test usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/python3-gffutils usr/share/man usr/share/man/man1 usr/share/man/man1/gffutils-cli-children.1.gz usr/share/man/man1/gffutils-cli-clean.1.gz usr/share/man/man1/gffutils-cli-common.1.gz usr/share/man/man1/gffutils-cli-create.1.gz usr/share/man/man1/gffutils-cli-fetch.1.gz usr/share/man/man1/gffutils-cli-parents.1.gz usr/share/man/man1/gffutils-cli-region.1.gz usr/share/man/man1/gffutils-cli-rmdups.1.gz usr/share/man/man1/gffutils-cli-sanitize.1.gz usr/share/man/man1/gffutils-cli.1.gz