python3-mdanalysis (2.9.0-12)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-forky
- Repository
- https://deb.debian.org/debian
- Codename
- forky
- Component
- main
- Source
- mdanalysis
- Architecture
- s390x
- Section
- python
- Priority
- optional
- Maintainer
- Debichem Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 24.5 kB
- Size expected
- 4 MB
- Size actual
- 4 MB
- Size match
Dependencies
Required package dependencies
- python3-duecredit
- python3-biopython (>= 1.80)
- python3 (<< 3.14)
- python3 (>= 3.13~)
- python3-filelock
- python3-griddataformats
- python3-joblib
- python3-matplotlib
- python3-mda-xdrlib
- python3-mmtf
- python3-numpy
- python3-numpy2-abi0 | python3-numpy-abi9
- python3-packaging
- python3-scipy
- python3-threadpoolctl
- python3-tqdm
- python3:any
- libc6 (>= 2.4)
- libgcc-s1 (>= 3.0)
- libgomp1 (>= 4.9)
- libstdc++6 (>= 11)
Description
analyse molecular dynamics files and trajectories
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 2c1a586e…e2909af2 | |
| SHA-1 | cecbe587…8cbe7eee | |
| SHA-256 | 9ae88006…7c1e390c | |
| SHA-512 | bf56892c…63ba8857 |
Contents
Files and directories included
. usr usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/MDAnalysis usr/lib/python3/dist-packages/MDAnalysis/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis usr/lib/python3/dist-packages/MDAnalysis/analysis/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/align.py usr/lib/python3/dist-packages/MDAnalysis/analysis/atomicdistances.py usr/lib/python3/dist-packages/MDAnalysis/analysis/backends.py usr/lib/python3/dist-packages/MDAnalysis/analysis/base.py usr/lib/python3/dist-packages/MDAnalysis/analysis/bat.py usr/lib/python3/dist-packages/MDAnalysis/analysis/contacts.py usr/lib/python3/dist-packages/MDAnalysis/analysis/data usr/lib/python3/dist-packages/MDAnalysis/analysis/data/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/data/filenames.py usr/lib/python3/dist-packages/MDAnalysis/analysis/data/janin_ref_data.npy usr/lib/python3/dist-packages/MDAnalysis/analysis/data/rama_ref_data.npy usr/lib/python3/dist-packages/MDAnalysis/analysis/density.py usr/lib/python3/dist-packages/MDAnalysis/analysis/dielectric.py usr/lib/python3/dist-packages/MDAnalysis/analysis/diffusionmap.py usr/lib/python3/dist-packages/MDAnalysis/analysis/dihedrals.py usr/lib/python3/dist-packages/MDAnalysis/analysis/distances.py usr/lib/python3/dist-packages/MDAnalysis/analysis/dssp usr/lib/python3/dist-packages/MDAnalysis/analysis/dssp/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/dssp/dssp.py usr/lib/python3/dist-packages/MDAnalysis/analysis/dssp/pydssp_numpy.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/bootstrap.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/ClusterCollection.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/ClusteringMethod.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/affinityprop.c usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/affinityprop.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/affinityprop.pyx usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/cluster.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/include usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/include/ap.h usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/src usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/clustering/src/ap.c usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/confdistmatrix.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/covariance.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/cutils.c usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/cutils.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/cutils.pyx usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/include usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/include/spe.h usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/reduce_dimensionality.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/src usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.c usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.c usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.pyx usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/similarity.py usr/lib/python3/dist-packages/MDAnalysis/analysis/encore/utils.py usr/lib/python3/dist-packages/MDAnalysis/analysis/gnm.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hbonds usr/lib/python3/dist-packages/MDAnalysis/analysis/hbonds/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hbonds/hbond_autocorrel.py usr/lib/python3/dist-packages/MDAnalysis/analysis/helix_analysis.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hole2 usr/lib/python3/dist-packages/MDAnalysis/analysis/hole2/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hydrogenbonds usr/lib/python3/dist-packages/MDAnalysis/analysis/hydrogenbonds/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hydrogenbonds/hbond_analysis.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hydrogenbonds/hbond_autocorrel.py usr/lib/python3/dist-packages/MDAnalysis/analysis/hydrogenbonds/wbridge_analysis.py usr/lib/python3/dist-packages/MDAnalysis/analysis/leaflet.py usr/lib/python3/dist-packages/MDAnalysis/analysis/legacy usr/lib/python3/dist-packages/MDAnalysis/analysis/legacy/__init__.py usr/lib/python3/dist-packages/MDAnalysis/analysis/legacy/x3dna.py usr/lib/python3/dist-packages/MDAnalysis/analysis/lineardensity.py usr/lib/python3/dist-packages/MDAnalysis/analysis/msd.py usr/lib/python3/dist-packages/MDAnalysis/analysis/nucleicacids.py usr/lib/python3/dist-packages/MDAnalysis/analysis/nuclinfo.py usr/lib/python3/dist-packages/MDAnalysis/analysis/pca.py usr/lib/python3/dist-packages/MDAnalysis/analysis/polymer.py usr/lib/python3/dist-packages/MDAnalysis/analysis/psa.py usr/lib/python3/dist-packages/MDAnalysis/analysis/rdf.py usr/lib/python3/dist-packages/MDAnalysis/analysis/results.py usr/lib/python3/dist-packages/MDAnalysis/analysis/rms.py usr/lib/python3/dist-packages/MDAnalysis/analysis/waterdynamics.py usr/lib/python3/dist-packages/MDAnalysis/authors.py usr/lib/python3/dist-packages/MDAnalysis/auxiliary usr/lib/python3/dist-packages/MDAnalysis/auxiliary/EDR.py usr/lib/python3/dist-packages/MDAnalysis/auxiliary/XVG.py usr/lib/python3/dist-packages/MDAnalysis/auxiliary/__init__.py usr/lib/python3/dist-packages/MDAnalysis/auxiliary/base.py usr/lib/python3/dist-packages/MDAnalysis/auxiliary/core.py usr/lib/python3/dist-packages/MDAnalysis/converters usr/lib/python3/dist-packages/MDAnalysis/converters/OpenMM.py usr/lib/python3/dist-packages/MDAnalysis/converters/OpenMMParser.py usr/lib/python3/dist-packages/MDAnalysis/converters/ParmEd.py usr/lib/python3/dist-packages/MDAnalysis/converters/ParmEdParser.py usr/lib/python3/dist-packages/MDAnalysis/converters/RDKit.py usr/lib/python3/dist-packages/MDAnalysis/converters/RDKitParser.py usr/lib/python3/dist-packages/MDAnalysis/converters/__init__.py usr/lib/python3/dist-packages/MDAnalysis/converters/base.py usr/lib/python3/dist-packages/MDAnalysis/coordinates usr/lib/python3/dist-packages/MDAnalysis/coordinates/CRD.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/DCD.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/DLPoly.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/DMS.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/FHIAIMS.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/GMS.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/GRO.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/GSD.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/H5MD.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/INPCRD.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/LAMMPS.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/MMTF.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/MOL2.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/NAMDBIN.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/PDB.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/PDBQT.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/PQR.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/ParmEd.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/TNG.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/TRC.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/TRJ.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/TRR.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/TRZ.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/TXYZ.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/XDR.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/XTC.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/XYZ.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/__init__.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/base.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/chain.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/chemfiles.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/core.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/memory.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/null.py usr/lib/python3/dist-packages/MDAnalysis/coordinates/timestep.cpp usr/lib/python3/dist-packages/MDAnalysis/coordinates/timestep.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/coordinates/timestep.pxd usr/lib/python3/dist-packages/MDAnalysis/coordinates/timestep.pyx usr/lib/python3/dist-packages/MDAnalysis/core usr/lib/python3/dist-packages/MDAnalysis/core/__init__.py usr/lib/python3/dist-packages/MDAnalysis/core/_get_readers.py usr/lib/python3/dist-packages/MDAnalysis/core/accessors.py usr/lib/python3/dist-packages/MDAnalysis/core/groups.py usr/lib/python3/dist-packages/MDAnalysis/core/selection.py usr/lib/python3/dist-packages/MDAnalysis/core/topology.py usr/lib/python3/dist-packages/MDAnalysis/core/topologyattrs.py usr/lib/python3/dist-packages/MDAnalysis/core/topologyobjects.py usr/lib/python3/dist-packages/MDAnalysis/core/universe.py usr/lib/python3/dist-packages/MDAnalysis/due.py usr/lib/python3/dist-packages/MDAnalysis/exceptions.py usr/lib/python3/dist-packages/MDAnalysis/guesser usr/lib/python3/dist-packages/MDAnalysis/guesser/__init__.py usr/lib/python3/dist-packages/MDAnalysis/guesser/base.py usr/lib/python3/dist-packages/MDAnalysis/guesser/default_guesser.py usr/lib/python3/dist-packages/MDAnalysis/guesser/tables.py usr/lib/python3/dist-packages/MDAnalysis/lib usr/lib/python3/dist-packages/MDAnalysis/lib/NeighborSearch.py usr/lib/python3/dist-packages/MDAnalysis/lib/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/_augment.cpp usr/lib/python3/dist-packages/MDAnalysis/lib/_augment.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/_augment.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/_cutil.cpp usr/lib/python3/dist-packages/MDAnalysis/lib/_cutil.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/_cutil.pxd usr/lib/python3/dist-packages/MDAnalysis/lib/_cutil.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/_distopia.py usr/lib/python3/dist-packages/MDAnalysis/lib/_transformations.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances.c usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances.pxd usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances_openmp.c usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances_openmp.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/c_distances_openmp.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/correlations.py usr/lib/python3/dist-packages/MDAnalysis/lib/distances.py usr/lib/python3/dist-packages/MDAnalysis/lib/formats usr/lib/python3/dist-packages/MDAnalysis/lib/formats/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/formats/cython_util.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/cython_util.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/formats/cython_util.pxd usr/lib/python3/dist-packages/MDAnalysis/lib/formats/cython_util.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/endianswap.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/fastio.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/readdcd.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/trr_seek.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/xdrfile.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/xdrfile_trr.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/xdrfile_xtc.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/include/xtc_seek.h usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libdcd.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libdcd.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libdcd.pxd usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libdcd.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libmdaxdr.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libmdaxdr.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libmdaxdr.pxd usr/lib/python3/dist-packages/MDAnalysis/lib/formats/libmdaxdr.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src/trr_seek.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src/xdrfile.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src/xdrfile_trr.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src/xdrfile_xtc.c usr/lib/python3/dist-packages/MDAnalysis/lib/formats/src/xtc_seek.c usr/lib/python3/dist-packages/MDAnalysis/lib/include usr/lib/python3/dist-packages/MDAnalysis/lib/include/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/include/calc_distances.h usr/lib/python3/dist-packages/MDAnalysis/lib/libmdanalysis usr/lib/python3/dist-packages/MDAnalysis/lib/libmdanalysis/__init__.pxd usr/lib/python3/dist-packages/MDAnalysis/lib/libmdanalysis/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/log.py usr/lib/python3/dist-packages/MDAnalysis/lib/mdamath.py usr/lib/python3/dist-packages/MDAnalysis/lib/nsgrid.cpp usr/lib/python3/dist-packages/MDAnalysis/lib/nsgrid.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/nsgrid.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/picklable_file_io.py usr/lib/python3/dist-packages/MDAnalysis/lib/pkdtree.py usr/lib/python3/dist-packages/MDAnalysis/lib/qcprot.c usr/lib/python3/dist-packages/MDAnalysis/lib/qcprot.cpython-313-s390x-linux-gnu.so usr/lib/python3/dist-packages/MDAnalysis/lib/qcprot.pyx usr/lib/python3/dist-packages/MDAnalysis/lib/src usr/lib/python3/dist-packages/MDAnalysis/lib/src/transformations usr/lib/python3/dist-packages/MDAnalysis/lib/src/transformations/AUTHOR usr/lib/python3/dist-packages/MDAnalysis/lib/src/transformations/LICENCE usr/lib/python3/dist-packages/MDAnalysis/lib/src/transformations/__init__.py usr/lib/python3/dist-packages/MDAnalysis/lib/src/transformations/transformations.c usr/lib/python3/dist-packages/MDAnalysis/lib/transformations.py usr/lib/python3/dist-packages/MDAnalysis/lib/util.py usr/lib/python3/dist-packages/MDAnalysis/selections usr/lib/python3/dist-packages/MDAnalysis/selections/__init__.py usr/lib/python3/dist-packages/MDAnalysis/selections/base.py usr/lib/python3/dist-packages/MDAnalysis/selections/charmm.py usr/lib/python3/dist-packages/MDAnalysis/selections/gromacs.py usr/lib/python3/dist-packages/MDAnalysis/selections/jmol.py usr/lib/python3/dist-packages/MDAnalysis/selections/pymol.py usr/lib/python3/dist-packages/MDAnalysis/selections/vmd.py usr/lib/python3/dist-packages/MDAnalysis/tests usr/lib/python3/dist-packages/MDAnalysis/tests/__init__.py usr/lib/python3/dist-packages/MDAnalysis/tests/datafiles.py usr/lib/python3/dist-packages/MDAnalysis/topology usr/lib/python3/dist-packages/MDAnalysis/topology/CRDParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/DLPolyParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/DMSParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/ExtendedPDBParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/FHIAIMSParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/GMSParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/GROParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/GSDParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/HoomdXMLParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/ITPParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/LAMMPSParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/MMTFParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/MOL2Parser.py usr/lib/python3/dist-packages/MDAnalysis/topology/MinimalParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/PDBParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/PDBQTParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/PQRParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/PSFParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/ParmEdParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/TOPParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/TPRParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/TXYZParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/XYZParser.py usr/lib/python3/dist-packages/MDAnalysis/topology/__init__.py usr/lib/python3/dist-packages/MDAnalysis/topology/base.py usr/lib/python3/dist-packages/MDAnalysis/topology/core.py usr/lib/python3/dist-packages/MDAnalysis/topology/guessers.py usr/lib/python3/dist-packages/MDAnalysis/topology/tables.py usr/lib/python3/dist-packages/MDAnalysis/topology/tpr usr/lib/python3/dist-packages/MDAnalysis/topology/tpr/__init__.py usr/lib/python3/dist-packages/MDAnalysis/topology/tpr/obj.py usr/lib/python3/dist-packages/MDAnalysis/topology/tpr/setting.py usr/lib/python3/dist-packages/MDAnalysis/topology/tpr/utils.py usr/lib/python3/dist-packages/MDAnalysis/transformations usr/lib/python3/dist-packages/MDAnalysis/transformations/__init__.py usr/lib/python3/dist-packages/MDAnalysis/transformations/base.py usr/lib/python3/dist-packages/MDAnalysis/transformations/boxdimensions.py usr/lib/python3/dist-packages/MDAnalysis/transformations/fit.py usr/lib/python3/dist-packages/MDAnalysis/transformations/nojump.py usr/lib/python3/dist-packages/MDAnalysis/transformations/positionaveraging.py usr/lib/python3/dist-packages/MDAnalysis/transformations/rotate.py usr/lib/python3/dist-packages/MDAnalysis/transformations/translate.py usr/lib/python3/dist-packages/MDAnalysis/transformations/wrap.py usr/lib/python3/dist-packages/MDAnalysis/units.py usr/lib/python3/dist-packages/MDAnalysis/version.py usr/lib/python3/dist-packages/MDAnalysis/visualization usr/lib/python3/dist-packages/MDAnalysis/visualization/__init__.py usr/lib/python3/dist-packages/MDAnalysis/visualization/streamlines.py usr/lib/python3/dist-packages/MDAnalysis/visualization/streamlines_3D.py usr/lib/python3/dist-packages/doc usr/lib/python3/dist-packages/doc/README usr/lib/python3/dist-packages/doc/sphinx usr/lib/python3/dist-packages/doc/sphinx/Makefile usr/lib/python3/dist-packages/doc/sphinx/source usr/lib/python3/dist-packages/doc/sphinx/source/conf.py usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/align.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/atomicdistances.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/backends.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/bat.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/contacts.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/data.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/density.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/dielectric.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/diffusionmap.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/dihedrals.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/distances.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/dssp.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/bootstrap.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/clustering.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/confdistmatrix.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/covariance.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/dimensionality_reduction.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/similarity.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore/utils.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/encore.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/gnm.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel_deprecated.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/helix_analysis.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/hole2.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/hydrogenbonds.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/leaflet.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/legacy usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/legacy/x3dna.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/legacy_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/lineardensity.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/msd.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/nucleicacids.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/nuclinfo.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/parallelization.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/pca.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/polymer.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/psa.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/rdf.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/results.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/rms.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/waterdynamics.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis/wbridge_analysis.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/analysis_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary/EDR.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary/XVG.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary/core.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary/init.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/auxiliary_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/converters usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/converters/OpenMM.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/converters/ParmEd.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/converters/RDKit.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/converters/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/converters.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/CRD.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/DCD.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/DLPoly.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/DMS.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/FHIAIMS.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/GMS.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/GRO.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/GSD.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/H5MD.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/INPCRD.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/LAMMPS.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/MMTF.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/MOL2.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/NAMDBIN.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/PDB.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/PDBQT.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/PQR.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/TNG.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/TRC.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/TRJ.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/TRR.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/TRZ.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/TXYZ.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/XDR.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/XTC.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/XYZ.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/chain.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/chemfiles.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/core.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/init.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/memory.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/null.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/pickle_readers.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates/timestep.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/coordinates_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/accessors.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/groups.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/init.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/selection.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/topology.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/topologyattrs.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/topologyobjects.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core/universe.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/core_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/exceptions.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/guesser_modules usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/guesser_modules/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/guesser_modules/default_guesser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/guesser_modules/init.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/guesser_modules/tables.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/guesser_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/NeighborSearch.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/c_distances.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/c_distances_openmp.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/correlations.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/distances.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/formats usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/formats/libdcd.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/formats/libmdaxdr.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/log.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/mdamath.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/nsgrid.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/picklable_file_io.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/pkdtree.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/qcprot.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/transformations.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib/util.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/lib_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/overview.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/references.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections/charmm.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections/gromacs.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections/jmol.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections/pymol.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections/vmd.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/selections_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/CRDParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/DLPolyParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/DMSParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/ExtendedPDBParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/FHIAIMSParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/GMSParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/GROParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/GSDParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/HoomdXMLParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/ITPParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/LAMMPSParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/MMTFParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/MOL2Parser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/MinimalParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/PDBParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/PDBQTParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/PQRParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/PSFParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/TOPParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/TPRParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/TXYZParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/XYZParser.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/core.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/guessers.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/init.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/tables.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology/tpr_util.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/topology_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/trajectory_transformations.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/base.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/boxdimensions.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/fit.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/nojump.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/positionaveraging.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/rotate.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/translate.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/transformations/wrap.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/units.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/version.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/visualization usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/visualization/streamlines.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/visualization/streamlines_3D.rst usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/visualization/test_streamplot_3D.png usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/visualization/testing_streamline.png usr/lib/python3/dist-packages/doc/sphinx/source/documentation_pages/visualization_modules.rst usr/lib/python3/dist-packages/doc/sphinx/source/images usr/lib/python3/dist-packages/doc/sphinx/source/images/AnalysisBase_parallel.png usr/lib/python3/dist-packages/doc/sphinx/source/images/RSMD_plot.png usr/lib/python3/dist-packages/doc/sphinx/source/images/janin_demo_plot.png usr/lib/python3/dist-packages/doc/sphinx/source/images/janin_ref_plot.png usr/lib/python3/dist-packages/doc/sphinx/source/images/msd_demo_plot.png usr/lib/python3/dist-packages/doc/sphinx/source/images/parallelization_time.png usr/lib/python3/dist-packages/doc/sphinx/source/images/rama_demo_plot.png usr/lib/python3/dist-packages/doc/sphinx/source/images/rama_ref_plot.png usr/lib/python3/dist-packages/doc/sphinx/source/index.rst usr/lib/python3/dist-packages/doc/sphinx/source/references.bib usr/lib/python3/dist-packages/mdanalysis-2.9.0.dist-info usr/lib/python3/dist-packages/mdanalysis-2.9.0.dist-info/INSTALLER usr/lib/python3/dist-packages/mdanalysis-2.9.0.dist-info/METADATA usr/lib/python3/dist-packages/mdanalysis-2.9.0.dist-info/WHEEL usr/lib/python3/dist-packages/mdanalysis-2.9.0.dist-info/top_level.txt usr/share usr/share/doc usr/share/doc/python3-mdanalysis usr/share/doc/python3-mdanalysis/README usr/share/doc/python3-mdanalysis/changelog.Debian.gz usr/share/doc/python3-mdanalysis/copyright