resfinder (4.4.2-3)

Details

Core information at a glance

Distribution
debian
Origin
debian-forky
Repository
https://deb.debian.org/debian
Codename
forky
Component
main
Source
none
Architecture
s390x
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
402 B
Size expected
68.1 kB
Size actual
68.1 kB
Size match

Dependencies

Required package dependencies

  • python3:any
  • resfinder-db
  • python3-cgecore
  • python3-tabulate
  • ncbi-blast+-legacy
  • kma
  • python3-git
  • python3-dateutil
  • python3-cgelib

Suggested packages

Recommended additional packages

  • None

Description

identify acquired antimicrobial resistance genes

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5f6538bb5…31ad56df
SHA-1fd6d2bc5…1bcfe77e
SHA-256cf4b507c…bbe31bf8
SHA-512fcbb8110…5b2cb09f

Contents

Files and directories included

.
usr
usr/bin
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/resfinder
usr/lib/python3/dist-packages/resfinder/__init__.py
usr/lib/python3/dist-packages/resfinder/__main__.py
usr/lib/python3/dist-packages/resfinder/amr_abbreviations.md
usr/lib/python3/dist-packages/resfinder/cge
usr/lib/python3/dist-packages/resfinder/cge/__init__.py
usr/lib/python3/dist-packages/resfinder/cge/config.py
usr/lib/python3/dist-packages/resfinder/cge/output
usr/lib/python3/dist-packages/resfinder/cge/output/__init__.py
usr/lib/python3/dist-packages/resfinder/cge/output/exceptions.py
usr/lib/python3/dist-packages/resfinder/cge/output/gene_result.py
usr/lib/python3/dist-packages/resfinder/cge/output/orderedset.py
usr/lib/python3/dist-packages/resfinder/cge/output/phenotype_result.py
usr/lib/python3/dist-packages/resfinder/cge/output/seq_variation_result.py
usr/lib/python3/dist-packages/resfinder/cge/output/std_results.py
usr/lib/python3/dist-packages/resfinder/cge/output/table.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/__init__.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/abclassdef.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/dbhit.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/feature.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/isolate.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/phenodbpoint.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/phenotype.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/res_profile.py
usr/lib/python3/dist-packages/resfinder/cge/phenotype2genotype/res_sumtable.py
usr/lib/python3/dist-packages/resfinder/cge/pointfinder.py
usr/lib/python3/dist-packages/resfinder/cge/resfinder.py
usr/lib/python3/dist-packages/resfinder/cge/runinfo.py
usr/lib/python3/dist-packages/resfinder/environment_variables.md
usr/lib/python3/dist-packages/resfinder/species_abbreviations.md
usr/share
usr/share/doc
usr/share/doc/resfinder
usr/share/doc/resfinder/README.Debian
usr/share/doc/resfinder/README.test
usr/share/doc/resfinder/changelog.Debian.gz
usr/share/doc/resfinder/changelog.gz
usr/share/doc/resfinder/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/run_resfinder.py.1.gz
usr/share/python3
usr/share/python3/runtime.d
usr/share/python3/runtime.d/resfinder.rtupdate
usr/share/resfinder
usr/share/resfinder/run_resfinder.py
usr/share/resfinder/scripts
usr/share/resfinder/scripts/env_variables.txt
usr/share/resfinder/scripts/fparseJSONtoRESULTS.py
usr/share/resfinder/scripts/get_commits_etc.py
usr/share/resfinder/scripts/install_resfinder.sh
usr/share/resfinder/scripts/run_indexes.sh
usr/share/resfinder/scripts/wdl
usr/share/resfinder/scripts/wdl/README.md
usr/share/resfinder/scripts/wdl/computerome.conf
usr/share/resfinder/scripts/wdl/input.json
usr/share/resfinder/scripts/wdl/resfinder.wdl
usr/bin/run_resfinder.py