seqan-apps (2.4.0+dfsg-16)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-forky
- Repository
- https://deb.debian.org/debian
- Codename
- forky
- Component
- main
- Source
- seqan2
- Architecture
- s390x
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 80.7 kB
- Size expected
- 12.7 MB
- Size actual
- 12.7 MB
- Size match
Dependencies
Required package dependencies
Description
C++ library for the analysis of biological sequences
Tags
Package classification tags
devel::library
role::devel-lib
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 316e7dd4…dff1e97c | |
| SHA-1 | 19bd101b…7cd37201 | |
| SHA-256 | b57ccc34…7792066a | |
| SHA-512 | 7e442da9…826a1b4c |
Contents
Files and directories included
. usr usr/bin usr/lib usr/lib/seqan usr/lib/seqan/bin usr/lib/seqan/bin/alf usr/lib/seqan/bin/bam2roi usr/lib/seqan/bin/bed_sort.sh usr/lib/seqan/bin/bisar usr/lib/seqan/bin/casbar usr/lib/seqan/bin/compute_gain usr/lib/seqan/bin/dfi usr/lib/seqan/bin/fiona usr/lib/seqan/bin/fiona_illumina usr/lib/seqan/bin/four2three usr/lib/seqan/bin/fx_bam_coverage usr/lib/seqan/bin/gff_sort.sh usr/lib/seqan/bin/gustaf usr/lib/seqan/bin/gustaf_mate_joining usr/lib/seqan/bin/insegt usr/lib/seqan/bin/mason_frag_sequencing usr/lib/seqan/bin/mason_genome usr/lib/seqan/bin/mason_materializer usr/lib/seqan/bin/mason_methylation usr/lib/seqan/bin/mason_simulator usr/lib/seqan/bin/mason_splicing usr/lib/seqan/bin/mason_variator usr/lib/seqan/bin/micro_razers usr/lib/seqan/bin/pair_align usr/lib/seqan/bin/param_chooser usr/lib/seqan/bin/plot.awk usr/lib/seqan/bin/ps2pswLinks.gawk usr/lib/seqan/bin/rabema_build_gold_standard usr/lib/seqan/bin/rabema_evaluate usr/lib/seqan/bin/rabema_prepare_sam usr/lib/seqan/bin/razers usr/lib/seqan/bin/razers3 usr/lib/seqan/bin/rep_sep usr/lib/seqan/bin/roi_feature_projection usr/lib/seqan/bin/roi_plot_9.sh usr/lib/seqan/bin/roi_plot_thumbnails usr/lib/seqan/bin/roi_sort.sh usr/lib/seqan/bin/s4_join usr/lib/seqan/bin/s4_search usr/lib/seqan/bin/sak usr/lib/seqan/bin/sam2matrix usr/lib/seqan/bin/samcat usr/lib/seqan/bin/seqan_tcoffee usr/lib/seqan/bin/seqcons2 usr/lib/seqan/bin/sgip usr/lib/seqan/bin/snp_store usr/lib/seqan/bin/splazers usr/lib/seqan/bin/stellar usr/lib/seqan/bin/tree_recon usr/lib/seqan/bin/yara_indexer usr/lib/seqan/bin/yara_mapper usr/share usr/share/doc usr/share/doc/seqan-apps usr/share/doc/seqan-apps/README.Debian usr/share/doc/seqan-apps/alf usr/share/doc/seqan-apps/alf/README.gz usr/share/doc/seqan-apps/alf/example usr/share/doc/seqan-apps/alf/example/small.fasta usr/share/doc/seqan-apps/bs_tools usr/share/doc/seqan-apps/bs_tools/README usr/share/doc/seqan-apps/changelog.Debian.gz usr/share/doc/seqan-apps/changelog.gz usr/share/doc/seqan-apps/copyright usr/share/doc/seqan-apps/dfi usr/share/doc/seqan-apps/dfi/README.gz usr/share/doc/seqan-apps/dfi/example usr/share/doc/seqan-apps/dfi/example/fasta1.fa usr/share/doc/seqan-apps/dfi/example/fasta2.fa usr/share/doc/seqan-apps/fiona usr/share/doc/seqan-apps/fiona/README usr/share/doc/seqan-apps/fiona/example usr/share/doc/seqan-apps/fiona/example/reads.fa.gz usr/share/doc/seqan-apps/fx_tools usr/share/doc/seqan-apps/fx_tools/README usr/share/doc/seqan-apps/gustaf usr/share/doc/seqan-apps/gustaf/README.gz usr/share/doc/seqan-apps/gustaf/example usr/share/doc/seqan-apps/gustaf/example/adeno.fa.gz usr/share/doc/seqan-apps/gustaf/example/adeno_modified.fa.gz usr/share/doc/seqan-apps/gustaf/example/adeno_modified_reads.fa usr/share/doc/seqan-apps/gustaf/example/stellar.gff usr/share/doc/seqan-apps/insegt usr/share/doc/seqan-apps/insegt/README.gz usr/share/doc/seqan-apps/insegt/example usr/share/doc/seqan-apps/insegt/example/annoOutput.gff usr/share/doc/seqan-apps/insegt/example/annotations.gff usr/share/doc/seqan-apps/insegt/example/readOutput.gff usr/share/doc/seqan-apps/insegt/example/tupleOutput.gff usr/share/doc/seqan-apps/mason2 usr/share/doc/seqan-apps/mason2/README usr/share/doc/seqan-apps/mason2/README.mason_frag_sequencing usr/share/doc/seqan-apps/mason2/README.mason_genome usr/share/doc/seqan-apps/mason2/README.mason_materializer usr/share/doc/seqan-apps/mason2/README.mason_methylation.gz usr/share/doc/seqan-apps/mason2/README.mason_simulator.gz usr/share/doc/seqan-apps/mason2/README.mason_splicing usr/share/doc/seqan-apps/mason2/README.mason_variator.gz usr/share/doc/seqan-apps/mason2/example usr/share/doc/seqan-apps/mason2/example/adeno_virus.fa.gz usr/share/doc/seqan-apps/micro_razers usr/share/doc/seqan-apps/micro_razers/README.gz usr/share/doc/seqan-apps/micro_razers/example usr/share/doc/seqan-apps/micro_razers/example/genome.fa usr/share/doc/seqan-apps/micro_razers/example/reads.fa usr/share/doc/seqan-apps/micro_razers/example/reads.fa.result usr/share/doc/seqan-apps/ngs_roi usr/share/doc/seqan-apps/ngs_roi/R usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.tar.gz usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.zip usr/share/doc/seqan-apps/ngs_roi/README.gz usr/share/doc/seqan-apps/ngs_roi/example usr/share/doc/seqan-apps/ngs_roi/example/dmel.bed.gz usr/share/doc/seqan-apps/ngs_roi/example/dmel.gtf.gz usr/share/doc/seqan-apps/ngs_roi/example/example.bam.gz usr/share/doc/seqan-apps/pair_align usr/share/doc/seqan-apps/pair_align/README usr/share/doc/seqan-apps/param_chooser usr/share/doc/seqan-apps/param_chooser/README usr/share/doc/seqan-apps/rabema usr/share/doc/seqan-apps/rabema/README.gz usr/share/doc/seqan-apps/razers usr/share/doc/seqan-apps/razers/README.gz usr/share/doc/seqan-apps/razers/example usr/share/doc/seqan-apps/razers/example/genome.fa usr/share/doc/seqan-apps/razers/example/reads.fa usr/share/doc/seqan-apps/razers/example/reads2.fa usr/share/doc/seqan-apps/razers3 usr/share/doc/seqan-apps/razers3/README.gz usr/share/doc/seqan-apps/razers3/example usr/share/doc/seqan-apps/razers3/example/genome.fa usr/share/doc/seqan-apps/razers3/example/reads.fa usr/share/doc/seqan-apps/razers3/example/reads2.fa usr/share/doc/seqan-apps/rep_sep usr/share/doc/seqan-apps/rep_sep/README usr/share/doc/seqan-apps/sak usr/share/doc/seqan-apps/sak/README usr/share/doc/seqan-apps/sak/README.sak.txt usr/share/doc/seqan-apps/sam2matrix usr/share/doc/seqan-apps/sam2matrix/README usr/share/doc/seqan-apps/samcat usr/share/doc/seqan-apps/samcat/README usr/share/doc/seqan-apps/searchjoin usr/share/doc/seqan-apps/searchjoin/README usr/share/doc/seqan-apps/seqan_tcoffee usr/share/doc/seqan-apps/seqan_tcoffee/README usr/share/doc/seqan-apps/seqan_tcoffee/example usr/share/doc/seqan-apps/seqan_tcoffee/example/seq.fa usr/share/doc/seqan-apps/seqcons2 usr/share/doc/seqan-apps/seqcons2/README usr/share/doc/seqan-apps/sgip usr/share/doc/seqan-apps/sgip/README usr/share/doc/seqan-apps/sgip/example usr/share/doc/seqan-apps/sgip/example/iso_m2D_m196.A01 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A00.gz usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A01.gz usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B00.gz usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B01.gz usr/share/doc/seqan-apps/sgip/example/latin-4 usr/share/doc/seqan-apps/sgip/example/lattice-4 usr/share/doc/seqan-apps/sgip/example/sts-7 usr/share/doc/seqan-apps/snp_store usr/share/doc/seqan-apps/snp_store/README.gz usr/share/doc/seqan-apps/snp_store/example usr/share/doc/seqan-apps/snp_store/example/exampleGenome.fa.gz usr/share/doc/seqan-apps/snp_store/example/exampleReads.gff usr/share/doc/seqan-apps/splazers usr/share/doc/seqan-apps/splazers/README.gz usr/share/doc/seqan-apps/splazers/example usr/share/doc/seqan-apps/splazers/example/genome.fa usr/share/doc/seqan-apps/splazers/example/reads.fa usr/share/doc/seqan-apps/splazers/example/reads.fa.result usr/share/doc/seqan-apps/stellar usr/share/doc/seqan-apps/stellar/README.gz usr/share/doc/seqan-apps/stellar/example usr/share/doc/seqan-apps/stellar/example/NC_001474.fasta.gz usr/share/doc/seqan-apps/stellar/example/NC_001477.fasta.gz usr/share/doc/seqan-apps/stellar/example/reads.fasta usr/share/doc/seqan-apps/tree_recon usr/share/doc/seqan-apps/tree_recon/README usr/share/doc/seqan-apps/tree_recon/example usr/share/doc/seqan-apps/tree_recon/example/example.dist usr/share/doc/seqan-apps/yara usr/share/doc/seqan-apps/yara/README.rst.gz usr/share/man usr/share/man/man1 usr/share/man/man1/alf.1.gz usr/share/man/man1/gustaf.1.gz usr/share/man/man1/insegt.1.gz usr/share/man/man1/mason_frag_sequencing.1.gz usr/share/man/man1/mason_genome.1.gz usr/share/man/man1/mason_materializer.1.gz usr/share/man/man1/mason_methylation.1.gz usr/share/man/man1/micro_razers.1.gz usr/share/man/man1/pair_align.1.gz usr/share/man/man1/rabema_build_gold_standard.1.gz usr/share/man/man1/rabema_evaluate.1.gz usr/share/man/man1/rabema_prepare_sam.1.gz usr/share/man/man1/razers.1.gz usr/share/man/man1/razers3.1.gz usr/share/man/man1/sak.1.gz usr/share/man/man1/seqan_tcoffee.1.gz usr/share/man/man1/snp_store.1.gz usr/share/man/man1/splazers.1.gz usr/share/man/man1/stellar.1.gz usr/share/man/man1/tree_recon.1.gz usr/share/man/man1/yara_indexer.1.gz usr/share/man/man1/yara_mapper.1.gz usr/bin/alf usr/bin/gustaf usr/bin/insegt usr/bin/mason_frag_sequencing usr/bin/mason_genome usr/bin/mason_materializer usr/bin/mason_methylation usr/bin/micro_razers usr/bin/pair_align usr/bin/rabema_build_gold_standard usr/bin/rabema_evaluate usr/bin/rabema_prepare_sam usr/bin/razers usr/bin/razers3 usr/bin/sak usr/bin/seqan_tcoffee usr/bin/snp_store usr/bin/splazers usr/bin/stellar usr/bin/tree_recon usr/bin/yara_indexer usr/bin/yara_mapper