snakemake (7.32.4-8.1)

Details

Core information at a glance

Distribution
debian
Origin
debian-forky
Repository
https://deb.debian.org/debian
Codename
forky
Component
main
Source
none
Architecture
s390x
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
1.6 kB
Size expected
318 kB
Size actual
318 kB
Size match

Dependencies

Required package dependencies

  • python3-configargparse
  • python3-connection-pool
  • python3-datrie
  • python3-docutils
  • python3-git
  • python3-humanfriendly
  • python3-jinja2 (>= 3.0~)
  • python3-jsonschema
  • python3-nbformat
  • python3-packaging
  • python3-platformdirs
  • python3-psutil
  • python3-pulp (>= 2.0~)
  • python3-requests
  • python3-retry
  • python3-smart-open (>= 3.0~)
  • python3-stopit
  • python3-tabulate
  • python3-throttler
  • python3-toposort
  • python3-wrapt
  • python3-yaml
  • python3-yte
  • python3:any
  • ca-certificates
  • libjs-bootstrap
  • libjs-jquery

Suggested packages

Recommended additional packages

  • slurm-client
  • snakemake-doc

Description

pythonic workflow management system

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5dd42453b…2f2d00f9
SHA-1d47ca3db…3f7e42f1
SHA-25656df2dab…d2f3a7b4
SHA-5128ed40727…fbb6e3ba

Contents

Files and directories included

.
usr
usr/bin
usr/bin/snakemake
usr/bin/snakemake-bash-completion
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/snakemake
usr/lib/python3/dist-packages/snakemake/__init__.py
usr/lib/python3/dist-packages/snakemake/__main__.py
usr/lib/python3/dist-packages/snakemake/_version.py
usr/lib/python3/dist-packages/snakemake/benchmark.py
usr/lib/python3/dist-packages/snakemake/caching
usr/lib/python3/dist-packages/snakemake/caching/__init__.py
usr/lib/python3/dist-packages/snakemake/caching/hash.py
usr/lib/python3/dist-packages/snakemake/caching/local.py
usr/lib/python3/dist-packages/snakemake/caching/remote.py
usr/lib/python3/dist-packages/snakemake/checkpoints.py
usr/lib/python3/dist-packages/snakemake/common
usr/lib/python3/dist-packages/snakemake/common/__init__.py
usr/lib/python3/dist-packages/snakemake/common/tbdstring.py
usr/lib/python3/dist-packages/snakemake/cwl.py
usr/lib/python3/dist-packages/snakemake/dag.py
usr/lib/python3/dist-packages/snakemake/decorators.py
usr/lib/python3/dist-packages/snakemake/deployment
usr/lib/python3/dist-packages/snakemake/deployment/__init__.py
usr/lib/python3/dist-packages/snakemake/deployment/conda.py
usr/lib/python3/dist-packages/snakemake/deployment/containerize.py
usr/lib/python3/dist-packages/snakemake/deployment/env_modules.py
usr/lib/python3/dist-packages/snakemake/deployment/singularity.py
usr/lib/python3/dist-packages/snakemake/exceptions.py
usr/lib/python3/dist-packages/snakemake/executors
usr/lib/python3/dist-packages/snakemake/executors/__init__.py
usr/lib/python3/dist-packages/snakemake/executors/azure_batch.py
usr/lib/python3/dist-packages/snakemake/executors/common.py
usr/lib/python3/dist-packages/snakemake/executors/flux.py
usr/lib/python3/dist-packages/snakemake/executors/ga4gh_tes.py
usr/lib/python3/dist-packages/snakemake/executors/google_lifesciences.py
usr/lib/python3/dist-packages/snakemake/executors/google_lifesciences_helper.py
usr/lib/python3/dist-packages/snakemake/executors/jobscript.sh
usr/lib/python3/dist-packages/snakemake/executors/slurm
usr/lib/python3/dist-packages/snakemake/executors/slurm/__init__.py
usr/lib/python3/dist-packages/snakemake/executors/slurm/slurm_jobstep.py
usr/lib/python3/dist-packages/snakemake/executors/slurm/slurm_submit.py
usr/lib/python3/dist-packages/snakemake/gui.html
usr/lib/python3/dist-packages/snakemake/gui.py
usr/lib/python3/dist-packages/snakemake/interfaces.py
usr/lib/python3/dist-packages/snakemake/io.py
usr/lib/python3/dist-packages/snakemake/jobs.py
usr/lib/python3/dist-packages/snakemake/linting
usr/lib/python3/dist-packages/snakemake/linting/__init__.py
usr/lib/python3/dist-packages/snakemake/linting/links.py
usr/lib/python3/dist-packages/snakemake/linting/rules.py
usr/lib/python3/dist-packages/snakemake/linting/snakefiles.py
usr/lib/python3/dist-packages/snakemake/logging.py
usr/lib/python3/dist-packages/snakemake/modules.py
usr/lib/python3/dist-packages/snakemake/notebook.py
usr/lib/python3/dist-packages/snakemake/output_index.py
usr/lib/python3/dist-packages/snakemake/parser.py
usr/lib/python3/dist-packages/snakemake/path_modifier.py
usr/lib/python3/dist-packages/snakemake/persistence.py
usr/lib/python3/dist-packages/snakemake/profiles.py
usr/lib/python3/dist-packages/snakemake/remote
usr/lib/python3/dist-packages/snakemake/remote/AzBlob.py
usr/lib/python3/dist-packages/snakemake/remote/EGA.py
usr/lib/python3/dist-packages/snakemake/remote/FTP.py
usr/lib/python3/dist-packages/snakemake/remote/GS.py
usr/lib/python3/dist-packages/snakemake/remote/HTTP.py
usr/lib/python3/dist-packages/snakemake/remote/NCBI.py
usr/lib/python3/dist-packages/snakemake/remote/S3.py
usr/lib/python3/dist-packages/snakemake/remote/S3Mocked.py
usr/lib/python3/dist-packages/snakemake/remote/SFTP.py
usr/lib/python3/dist-packages/snakemake/remote/XRootD.py
usr/lib/python3/dist-packages/snakemake/remote/__init__.py
usr/lib/python3/dist-packages/snakemake/remote/dropbox.py
usr/lib/python3/dist-packages/snakemake/remote/gfal.py
usr/lib/python3/dist-packages/snakemake/remote/gridftp.py
usr/lib/python3/dist-packages/snakemake/remote/iRODS.py
usr/lib/python3/dist-packages/snakemake/remote/webdav.py
usr/lib/python3/dist-packages/snakemake/remote/zenodo.py
usr/lib/python3/dist-packages/snakemake/report
usr/lib/python3/dist-packages/snakemake/report/__init__.py
usr/lib/python3/dist-packages/snakemake/report/data
usr/lib/python3/dist-packages/snakemake/report/data/__init__.py
usr/lib/python3/dist-packages/snakemake/report/data/categories.py
usr/lib/python3/dist-packages/snakemake/report/data/common.py
usr/lib/python3/dist-packages/snakemake/report/data/packages.py
usr/lib/python3/dist-packages/snakemake/report/data/results.py
usr/lib/python3/dist-packages/snakemake/report/data/rulegraph.py
usr/lib/python3/dist-packages/snakemake/report/data/rules.py
usr/lib/python3/dist-packages/snakemake/report/data/runtimes.py
usr/lib/python3/dist-packages/snakemake/report/data/timeline.py
usr/lib/python3/dist-packages/snakemake/report/rulegraph_spec.py
usr/lib/python3/dist-packages/snakemake/report/template
usr/lib/python3/dist-packages/snakemake/report/template/__init__.py
usr/lib/python3/dist-packages/snakemake/report/template/components
usr/lib/python3/dist-packages/snakemake/report/template/components/__init__.py
usr/lib/python3/dist-packages/snakemake/report/template/components/abstract_menu.js
usr/lib/python3/dist-packages/snakemake/report/template/components/abstract_results.js
usr/lib/python3/dist-packages/snakemake/report/template/components/app.js
usr/lib/python3/dist-packages/snakemake/report/template/components/breadcrumbs.js
usr/lib/python3/dist-packages/snakemake/report/template/components/button.js
usr/lib/python3/dist-packages/snakemake/report/template/components/category.js
usr/lib/python3/dist-packages/snakemake/report/template/components/common.js
usr/lib/python3/dist-packages/snakemake/report/template/components/content.js
usr/lib/python3/dist-packages/snakemake/report/template/components/icon.js
usr/lib/python3/dist-packages/snakemake/report/template/components/list_heading.js
usr/lib/python3/dist-packages/snakemake/report/template/components/list_item.js
usr/lib/python3/dist-packages/snakemake/report/template/components/menu.js
usr/lib/python3/dist-packages/snakemake/report/template/components/navbar.js
usr/lib/python3/dist-packages/snakemake/report/template/components/report_info.js
usr/lib/python3/dist-packages/snakemake/report/template/components/result_info.js
usr/lib/python3/dist-packages/snakemake/report/template/components/result_view_button.js
usr/lib/python3/dist-packages/snakemake/report/template/components/rule_graph.js
usr/lib/python3/dist-packages/snakemake/report/template/components/rule_info.js
usr/lib/python3/dist-packages/snakemake/report/template/components/search_results.js
usr/lib/python3/dist-packages/snakemake/report/template/components/stats.js
usr/lib/python3/dist-packages/snakemake/report/template/components/subcategory.js
usr/lib/python3/dist-packages/snakemake/report/template/index.html.jinja2
usr/lib/python3/dist-packages/snakemake/report/template/logo.svg
usr/lib/python3/dist-packages/snakemake/report/template/style.css
usr/lib/python3/dist-packages/snakemake/report.css
usr/lib/python3/dist-packages/snakemake/resources.py
usr/lib/python3/dist-packages/snakemake/ruleinfo.py
usr/lib/python3/dist-packages/snakemake/rules.py
usr/lib/python3/dist-packages/snakemake/scheduler.py
usr/lib/python3/dist-packages/snakemake/script.py
usr/lib/python3/dist-packages/snakemake/shell.py
usr/lib/python3/dist-packages/snakemake/sourcecache.py
usr/lib/python3/dist-packages/snakemake/stats.py
usr/lib/python3/dist-packages/snakemake/target_jobs.py
usr/lib/python3/dist-packages/snakemake/template_rendering
usr/lib/python3/dist-packages/snakemake/template_rendering/__init__.py
usr/lib/python3/dist-packages/snakemake/template_rendering/jinja2.py
usr/lib/python3/dist-packages/snakemake/template_rendering/yte.py
usr/lib/python3/dist-packages/snakemake/unit_tests
usr/lib/python3/dist-packages/snakemake/unit_tests/__init__.py
usr/lib/python3/dist-packages/snakemake/unit_tests/templates
usr/lib/python3/dist-packages/snakemake/unit_tests/templates/__init__.py
usr/lib/python3/dist-packages/snakemake/unit_tests/templates/common.py.jinja2
usr/lib/python3/dist-packages/snakemake/unit_tests/templates/ruletest.py.jinja2
usr/lib/python3/dist-packages/snakemake/utils.py
usr/lib/python3/dist-packages/snakemake/workflow.py
usr/lib/python3/dist-packages/snakemake/wrapper.py
usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info
usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/INSTALLER
usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/METADATA
usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/WHEEL
usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/entry_points.txt
usr/lib/python3/dist-packages/snakemake-7.32.4.dist-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/snakemake
usr/share/doc/snakemake/changelog.Debian.gz
usr/share/doc/snakemake/changelog.gz
usr/share/doc/snakemake/copyright
usr/share/lintian
usr/share/lintian/overrides
usr/share/lintian/overrides/snakemake
usr/share/man
usr/share/man/man1
usr/share/man/man1/snakemake.1.gz