q2-quality-control (2024.5.0-2)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3.7 kB
- Size expected
- 728.8 kB
- Size actual
- 728.8 kB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
QIIME 2 plugin for quality assurance of feature and sequence data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | fd89e136…106ccd77 | |
| SHA-1 | 26619624…3afd1245 | |
| SHA-256 | 51762359…490e3227 | |
| SHA-512 | 686c5bb6…c4c1313c |
Contents
Files and directories included
. usr usr/bin usr/bin/run_decontam.R usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/q2_quality_control usr/lib/python3/dist-packages/q2_quality_control/__init__.py usr/lib/python3/dist-packages/q2_quality_control/_blast.py usr/lib/python3/dist-packages/q2_quality_control/_evaluate_seqs.py usr/lib/python3/dist-packages/q2_quality_control/_evaluate_taxonomy.py usr/lib/python3/dist-packages/q2_quality_control/_filter.py usr/lib/python3/dist-packages/q2_quality_control/_pipelines.py usr/lib/python3/dist-packages/q2_quality_control/_stats.py usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph/__init__.py usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph/_visualizer.py usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph/assets usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph/assets/index.html usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph/assets/js usr/lib/python3/dist-packages/q2_quality_control/_threshold_graph/assets/js/tsorter.min.js usr/lib/python3/dist-packages/q2_quality_control/_transformer.py usr/lib/python3/dist-packages/q2_quality_control/_utilities.py usr/lib/python3/dist-packages/q2_quality_control/_version.py usr/lib/python3/dist-packages/q2_quality_control/assets usr/lib/python3/dist-packages/q2_quality_control/assets/index.html usr/lib/python3/dist-packages/q2_quality_control/citations.bib usr/lib/python3/dist-packages/q2_quality_control/decontam.py usr/lib/python3/dist-packages/q2_quality_control/plugin_setup.py usr/lib/python3/dist-packages/q2_quality_control/quality_control.py usr/lib/python3/dist-packages/q2_quality_control/tests usr/lib/python3/dist-packages/q2_quality_control/tests/__init__.py usr/lib/python3/dist-packages/q2_quality_control/tests/data usr/lib/python3/dist-packages/q2_quality_control/tests/data/bacterial-query-sequences.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/bacterial-ref-sequences.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/exp-results.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/combined-score-table.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/decon_default_ASV_table.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/decon_default_score_table.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/frequency-score-table.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/no-contaminant-asv-table.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/prevalence-score-table.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/score-table-format.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/test_metadata.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/test_metadata_different_ordered_names.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/expected/test_metadata_more_sample_names.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/fungal-query-sequences.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/fungal-ref-sequences.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/mock-3-expected-taxonomy.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/mock-3-obs-table.biom usr/lib/python3/dist-packages/q2_quality_control/tests/data/mock-3-observed-taxonomy.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/mock-3-results.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/paired-end.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/qc-mock-3-expected.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/qc-mock-3-observed.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/query-partially-random.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/query-sequences-left-justified.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/query-sequences-short.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/query-sequences-with-mismatch.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/query-sequences.fasta usr/lib/python3/dist-packages/q2_quality_control/tests/data/sars2-genome.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/sars2-indexed.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/single-end.qza usr/lib/python3/dist-packages/q2_quality_control/tests/data/test_evaluate_seqs_identical.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/test_evaluate_seqs_mismatches.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/data/test_evaluate_seqs_part_rand.tsv usr/lib/python3/dist-packages/q2_quality_control/tests/test_decontam.py usr/lib/python3/dist-packages/q2_quality_control/tests/test_filter.py usr/lib/python3/dist-packages/q2_quality_control/tests/test_quality_control.py usr/lib/python3/dist-packages/q2_quality_control/tests/test_stats.py usr/lib/python3/dist-packages/q2_quality_control-2024.5.0.egg-info usr/lib/python3/dist-packages/q2_quality_control-2024.5.0.egg-info/PKG-INFO usr/lib/python3/dist-packages/q2_quality_control-2024.5.0.egg-info/dependency_links.txt usr/lib/python3/dist-packages/q2_quality_control-2024.5.0.egg-info/entry_points.txt usr/lib/python3/dist-packages/q2_quality_control-2024.5.0.egg-info/not-zip-safe usr/lib/python3/dist-packages/q2_quality_control-2024.5.0.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/q2-quality-control usr/share/doc/q2-quality-control/changelog.Debian.gz usr/share/doc/q2-quality-control/copyright