q2-types (2024.5.0-1)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 50.9 kB
- Size expected
- 5.5 MB
- Size actual
- 5.5 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
QIIME 2 plugin defining types for microbiome analysis
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 6dc2a0f2…6973c8c8 | |
| SHA-1 | e7781a12…bac05de6 | |
| SHA-256 | 951ae37e…9575c085 | |
| SHA-512 | 29688c66…7a32f838 |
Contents
Files and directories included
. usr usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/q2_types usr/lib/python3/dist-packages/q2_types/__init__.py usr/lib/python3/dist-packages/q2_types/_util.py usr/lib/python3/dist-packages/q2_types/_version.py usr/lib/python3/dist-packages/q2_types/bowtie2 usr/lib/python3/dist-packages/q2_types/bowtie2/__init__.py usr/lib/python3/dist-packages/q2_types/bowtie2/_formats.py usr/lib/python3/dist-packages/q2_types/bowtie2/_types.py usr/lib/python3/dist-packages/q2_types/citations.bib usr/lib/python3/dist-packages/q2_types/distance_matrix usr/lib/python3/dist-packages/q2_types/distance_matrix/__init__.py usr/lib/python3/dist-packages/q2_types/distance_matrix/_format.py usr/lib/python3/dist-packages/q2_types/distance_matrix/_transformer.py usr/lib/python3/dist-packages/q2_types/distance_matrix/_type.py usr/lib/python3/dist-packages/q2_types/distance_matrix/tests usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/__init__.py usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/data usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/data/distance-matrix-1x1.tsv usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/data/distance-matrix-2x2.tsv usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/data/distance-matrix-NxN.tsv usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/data/not-lsmat usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/test_format.py usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/distance_matrix/tests/test_type.py usr/lib/python3/dist-packages/q2_types/feature_data usr/lib/python3/dist-packages/q2_types/feature_data/__init__.py usr/lib/python3/dist-packages/q2_types/feature_data/_format.py usr/lib/python3/dist-packages/q2_types/feature_data/_transformer.py usr/lib/python3/dist-packages/q2_types/feature_data/_type.py usr/lib/python3/dist-packages/q2_types/feature_data/_util.py usr/lib/python3/dist-packages/q2_types/feature_data/tests usr/lib/python3/dist-packages/q2_types/feature_data/tests/__init__.py usr/lib/python3/dist-packages/q2_types/feature_data/tests/data usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/aligned-dna-sequences-mixed-case.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/aligned-dna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/aligned-protein-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/aligned-rna-sequences-mixed-case.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/aligned-rna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/bad_differential.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/blast6.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/blast6_invalid.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/differentials.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-mixed-case-with-bom-passes.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-consecutive-ids.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-corrupt-characters.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-duplicate-id.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-first-line-not-id.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-gisaid.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-id-starts-with-space.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-mixed-case-with-duplicate-ids.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-mixed-case.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-no-id.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences-with-duplicate-ids.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-with-bom-fails.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/dna-with-bom-passes.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/emp_multiplexed usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/emp_multiplexed/barcodes.fastq.gz usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/emp_multiplexed/sequences.fastq.gz usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/emp_multiplexed_single_end usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/emp_multiplexed_single_end/Undetermined_S0_L001_I1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/emp_multiplexed_single_end/Undetermined_S0_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/empty.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/empty_differential.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/feature-table-with-sequence-metadata.biom usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/inf_differential.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/left-dna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/mixed-case-aligned-protein-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/mixed-case-protein-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/not-dna-sequences usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/not-dna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/not-rna-sequences usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/not-rna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/not_differential.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/protein-sequences-duplicate-ids.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/protein-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/right-dna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/rna-mixed-case-with-bom-passes.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/rna-sequences-mixed-case-with-duplicate-ids.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/rna-sequences-mixed-case.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/rna-sequences-with-duplicate-ids.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/rna-sequences.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/rna-with-bom-passes.fasta usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/sequence_characteristics_length.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/sequence_characteristics_only_index.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/1-column.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/2-column.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/3-column.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/blanks usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/duplicate-columns.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/duplicate-ids.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/empty usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/feature-table-with-taxonomy-metadata_v210.biom usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/feature-table_v210.biom usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/greater-column-length.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/greater-header-length.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/header-only.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/headerless.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/jagged.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/leading_space_taxon.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/many-rows.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/start_end_space_taxon.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/trailing_space_taxon.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/data/taxonomy/valid-but-messy.tsv usr/lib/python3/dist-packages/q2_types/feature_data/tests/test_format.py usr/lib/python3/dist-packages/q2_types/feature_data/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/feature_data/tests/test_type.py usr/lib/python3/dist-packages/q2_types/feature_data_mag usr/lib/python3/dist-packages/q2_types/feature_data_mag/__init__.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/_format.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/_transformer.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/_type.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/__init__.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/good_ortholog_annotation usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/good_ortholog_annotation/test_output.emapper.annotations usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fa usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fa/23c5b64e-3f3e-4688-9862-e9dae4fa0f5b.fa usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fa/70c5a728-96a6-4eed-b9f9-9a73153c1385.fa usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fa/7e2a749a-a19a-4b62-8195-0ee601b5fdfb.fa usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fasta usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fasta/3b7d53fb-5b60-46c6-8819-aeda065b12e9.fasta usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/mags-fasta/6232c7e1-8ed7-47c8-9bdb-b94706a26931.fasta usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_extra usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_extra/test_output.emapper.annotations usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_extra/test_output.emapper.orthologs usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_mags usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_mags/d33dbcbe-eedd-4a19-8b93-e76a15ce107f.emapper.annotations usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_mags/e6408340-b308-4325-83a1-ea406f3e19ad.emapper.annotations usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_samples usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_samples/test_output1.emapper.annotations usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/data/ortholog_annotation_samples/test_output2.emapper.annotations usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/test_format.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/test_transformers.py usr/lib/python3/dist-packages/q2_types/feature_data_mag/tests/test_type.py usr/lib/python3/dist-packages/q2_types/feature_map usr/lib/python3/dist-packages/q2_types/feature_map/__init__.py usr/lib/python3/dist-packages/q2_types/feature_map/_format.py usr/lib/python3/dist-packages/q2_types/feature_map/_transformer.py usr/lib/python3/dist-packages/q2_types/feature_map/_type.py usr/lib/python3/dist-packages/q2_types/feature_map/tests usr/lib/python3/dist-packages/q2_types/feature_map/tests/__init__.py usr/lib/python3/dist-packages/q2_types/feature_map/tests/data usr/lib/python3/dist-packages/q2_types/feature_map/tests/data/mag-to-contigs-empty-list.json usr/lib/python3/dist-packages/q2_types/feature_map/tests/data/mag-to-contigs-invalid-ids.json usr/lib/python3/dist-packages/q2_types/feature_map/tests/data/mag-to-contigs-invalid-values.json usr/lib/python3/dist-packages/q2_types/feature_map/tests/data/mag-to-contigs-valid.json usr/lib/python3/dist-packages/q2_types/feature_map/tests/test_format.py usr/lib/python3/dist-packages/q2_types/feature_map/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/feature_map/tests/test_type.py usr/lib/python3/dist-packages/q2_types/feature_table usr/lib/python3/dist-packages/q2_types/feature_table/__init__.py usr/lib/python3/dist-packages/q2_types/feature_table/_format.py usr/lib/python3/dist-packages/q2_types/feature_table/_transformer.py usr/lib/python3/dist-packages/q2_types/feature_table/_type.py usr/lib/python3/dist-packages/q2_types/feature_table/tests usr/lib/python3/dist-packages/q2_types/feature_table/tests/__init__.py usr/lib/python3/dist-packages/q2_types/feature_table/tests/data usr/lib/python3/dist-packages/q2_types/feature_table/tests/data/feature-table_v100.biom usr/lib/python3/dist-packages/q2_types/feature_table/tests/data/feature-table_v210.biom usr/lib/python3/dist-packages/q2_types/feature_table/tests/test_format.py usr/lib/python3/dist-packages/q2_types/feature_table/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/feature_table/tests/test_type.py usr/lib/python3/dist-packages/q2_types/genome_data usr/lib/python3/dist-packages/q2_types/genome_data/__init__.py usr/lib/python3/dist-packages/q2_types/genome_data/_format.py usr/lib/python3/dist-packages/q2_types/genome_data/_transformer.py usr/lib/python3/dist-packages/q2_types/genome_data/_type.py usr/lib/python3/dist-packages/q2_types/genome_data/tests usr/lib/python3/dist-packages/q2_types/genome_data/tests/__init__.py usr/lib/python3/dist-packages/q2_types/genome_data/tests/data usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/genes usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/genes/genes1.fa usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/genes/genes2.fa usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci/loci1.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci/loci2.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-corrupt.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-directive-empty.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-empty-feature.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-invalid-char.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-invalid-phase.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-invalid-start.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-invalid-strand.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-lines-unequal.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-negative-start.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-no-version.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/loci-invalid/loci-wrong-version.gff usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/ortholog usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/ortholog/test_sample.emapper.seed_orthologs usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/proteins usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/proteins/proteins1.faa usr/lib/python3/dist-packages/q2_types/genome_data/tests/data/proteins/proteins2.faa usr/lib/python3/dist-packages/q2_types/genome_data/tests/test_format.py usr/lib/python3/dist-packages/q2_types/genome_data/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/genome_data/tests/test_type.py usr/lib/python3/dist-packages/q2_types/kaiju usr/lib/python3/dist-packages/q2_types/kaiju/__init__.py usr/lib/python3/dist-packages/q2_types/kaiju/_format.py usr/lib/python3/dist-packages/q2_types/kaiju/_type.py usr/lib/python3/dist-packages/q2_types/kaiju/tests usr/lib/python3/dist-packages/q2_types/kaiju/tests/__init__.py usr/lib/python3/dist-packages/q2_types/kaiju/tests/data usr/lib/python3/dist-packages/q2_types/kaiju/tests/data/db-valid usr/lib/python3/dist-packages/q2_types/kaiju/tests/data/db-valid/kaiju_db_test.fmi usr/lib/python3/dist-packages/q2_types/kaiju/tests/data/db-valid/names.dmp usr/lib/python3/dist-packages/q2_types/kaiju/tests/data/db-valid/nodes.dmp usr/lib/python3/dist-packages/q2_types/kaiju/tests/test_format.py usr/lib/python3/dist-packages/q2_types/kaiju/tests/test_type.py usr/lib/python3/dist-packages/q2_types/kraken2 usr/lib/python3/dist-packages/q2_types/kraken2/__init__.py usr/lib/python3/dist-packages/q2_types/kraken2/_format.py usr/lib/python3/dist-packages/q2_types/kraken2/_transformer.py usr/lib/python3/dist-packages/q2_types/kraken2/_type.py usr/lib/python3/dist-packages/q2_types/kraken2/tests usr/lib/python3/dist-packages/q2_types/kraken2/tests/__init__.py usr/lib/python3/dist-packages/q2_types/kraken2/tests/data usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/bracken-db usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/bracken-db/database100mers.kmer_distrib usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/bracken-db/database150mers.kmer_distrib usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports/report-dir usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports/report-dir/report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports/report-missing-column.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports/report-ok.csv usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports/report-wrong-types.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/db-reports/report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/kraken2-db usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/kraken2-db/hash.k2d usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/kraken2-db/opts.k2d usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/kraken2-db/taxo.k2d usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-contigs usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-contigs/output-ok-table.csv usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-contigs/output-ok.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-mags usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-mags/sample1 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-mags/sample1/bin1_output.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-mags/sample1/bin2_output.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-mags/sample2 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-mags/sample2/bin1_output.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-reads usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-reads/sample1 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-reads/sample1/output.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-reads/sample2 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-reads/sample2/output.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-single usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-single/output-missing-column.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-single/output-ok.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-single/output-only-classified.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/outputs-single/output-wrong-first-col.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/report-ok-table.csv usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-mags usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-mags/sample1 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-mags/sample1/bin1_report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-mags/sample1/bin2_report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-mags/sample2 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-mags/sample2/bin1_report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-reads usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-reads/sample1 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-reads/sample1/report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-reads/sample2 usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-reads/sample2/report.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-single usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-single/report-missing-column.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-single/report-ok.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/data/reports-single/report-wrong-types.txt usr/lib/python3/dist-packages/q2_types/kraken2/tests/test_format.py usr/lib/python3/dist-packages/q2_types/kraken2/tests/test_transformers.py usr/lib/python3/dist-packages/q2_types/kraken2/tests/test_type.py usr/lib/python3/dist-packages/q2_types/metadata usr/lib/python3/dist-packages/q2_types/metadata/__init__.py usr/lib/python3/dist-packages/q2_types/metadata/_format.py usr/lib/python3/dist-packages/q2_types/metadata/_transformer.py usr/lib/python3/dist-packages/q2_types/metadata/_type.py usr/lib/python3/dist-packages/q2_types/metadata/tests usr/lib/python3/dist-packages/q2_types/metadata/tests/__init__.py usr/lib/python3/dist-packages/q2_types/metadata/tests/data usr/lib/python3/dist-packages/q2_types/metadata/tests/data/invalid-metadata-1.tsv usr/lib/python3/dist-packages/q2_types/metadata/tests/data/metadata.tsv usr/lib/python3/dist-packages/q2_types/metadata/tests/test_format.py usr/lib/python3/dist-packages/q2_types/metadata/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/metadata/tests/test_type.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/__init__.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/_format.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/_transformer.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/_type.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/__init__.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/Human-Kneecap_S1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/absolute_manifests_v2 usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/absolute_manifests_v2/paired-MANIFEST usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/absolute_manifests_v2/single-MANIFEST usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/forward.fastq.gz usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/reads.fasta usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/reads.qual usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/reverse.fastq.gz usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/data/s1-phred64.fastq.gz usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/test_format.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/multiplexed_sequences/tests/test_type.py usr/lib/python3/dist-packages/q2_types/ordination usr/lib/python3/dist-packages/q2_types/ordination/__init__.py usr/lib/python3/dist-packages/q2_types/ordination/_format.py usr/lib/python3/dist-packages/q2_types/ordination/_transformer.py usr/lib/python3/dist-packages/q2_types/ordination/_type.py usr/lib/python3/dist-packages/q2_types/ordination/tests usr/lib/python3/dist-packages/q2_types/ordination/tests/__init__.py usr/lib/python3/dist-packages/q2_types/ordination/tests/data usr/lib/python3/dist-packages/q2_types/ordination/tests/data/m2stats-999-permus.tsv usr/lib/python3/dist-packages/q2_types/ordination/tests/data/not-pcoa-results.txt usr/lib/python3/dist-packages/q2_types/ordination/tests/data/pcoa-results-1x1.txt usr/lib/python3/dist-packages/q2_types/ordination/tests/data/pcoa-results-2x2.txt usr/lib/python3/dist-packages/q2_types/ordination/tests/data/pcoa-results-NxN.txt usr/lib/python3/dist-packages/q2_types/ordination/tests/test_format.py usr/lib/python3/dist-packages/q2_types/ordination/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/ordination/tests/test_type.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences usr/lib/python3/dist-packages/q2_types/per_sample_sequences/__init__.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/_format.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/_transformer.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/_type.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/_util.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/__init__.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/0.10_S2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/1_S1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Armpit.fastq usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Armpit.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Armpit_S2_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Armpit_S2_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Kneecap_S1_L001_R1_001.fastq usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Kneecap_S1_L001_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/Human-Kneecap_S1_R1_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests/jagged-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests/long-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests/paired-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests/single-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests_v2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests_v2/missing-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests_v2/multicol-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests_v2/numeric-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests_v2/paired-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/absolute_manifests_v2/single-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized/contigs.1.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized/contigs.2.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized/contigs.3.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized/contigs.4.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized/contigs.rev.1.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-unorganized/contigs.rev.2.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1/contigs.1.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1/contigs.2.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1/contigs.3.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1/contigs.4.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1/contigs.rev.1.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample1/mag1/contigs.rev.2.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1/contigs.1.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1/contigs.2.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1/contigs.3.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1/contigs.4.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1/contigs.rev.1.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/index-valid/sample2/mag1/contigs.rev.2.bt2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-invalid usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-invalid/sample1.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-invalid/sample2.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi/sample1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi/sample1/map1.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi/sample1/map2.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi/sample2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi/sample2/map1.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-multi/sample2/map2.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-single usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-single/sample1.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/bowtie/maps-single/sample2.bam usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/contigs usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/contigs/sample1_contigs.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/contigs/sample2_contigs.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/contigs/sample3_contigs.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/empty-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/empty-records-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/error_correction_details usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/error_correction_details/invalid.tsv usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/error_correction_details/missing_columns.tsv usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/error_correction_details/positive.tsv usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/incomplete-quality.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/incomplete-sep.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/incomplete-sequence.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/invalid-direction-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/invalid-quality.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/invalid-sep.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample1/mag1.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample1/mag2.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample1/mag3.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample2/mag1.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa/sample2/mag2.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample1/mag1.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample1/mag2.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample1/mag3.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample2/mag1.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fa-with-manifest/sample2/mag2.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample1/mag1.fasta usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample1/mag2.fasta usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample1/mag3.fasta usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample2/mag1.fasta usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-fasta/sample2/mag2.fasta usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-unorganized usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-unorganized/mag1.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mags/mags-unorganized/mag2.fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/manifests usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/manifests/MANIFEST-empty usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/manifests/MANIFEST-mags-fa usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/manifests/MANIFEST-missing-column usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/manifests/MANIFEST-missing-filepath usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/manifests/MANIFEST-no-samples usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/metadata.yml usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/metadata.yml.txt usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/mixed-case.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/no-data-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/not-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/not-fastq.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/not-metadata.yml usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data/Human-Kneecap_S1_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data_numeric usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data_numeric/0.10_S2_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data_numeric/1_S1_L001_R2_001.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/paired_end_data_numeric/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/partial-record.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/blank-line.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/description-only.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/duplicate-ids.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/empty usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/empty-header.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/empty-seq.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/incomplete.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/invalid-header.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/long.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/no-sample-id.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/no-secondary-id.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/no-underscore-in-id.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/not-dna.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/short.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/single-record.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/split-libraries-output.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/qiime1-demux-format/with-descriptions.fna usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/relative_manifests usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/relative_manifests/jagged-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/relative_manifests/long-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/relative_manifests/paired-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/relative_manifests/single-MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/s1-phred64.fastq usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/s1-phred64.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/s2-phred64.fastq usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/s2-phred64.fastq.gz usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single-end-two-sample-data1 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single-end-two-sample-data1/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single-end-two-sample-data2 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single-end-two-sample-data2/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single-end-two-sample-data3 usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single-end-two-sample-data3/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single_end_data usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single_end_data/MANIFEST usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/data/single_end_data/MANIFEST.txt usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/test_format.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/per_sample_sequences/tests/test_type.py usr/lib/python3/dist-packages/q2_types/plugin_setup.py usr/lib/python3/dist-packages/q2_types/reference_db usr/lib/python3/dist-packages/q2_types/reference_db/__init__.py usr/lib/python3/dist-packages/q2_types/reference_db/_format.py usr/lib/python3/dist-packages/q2_types/reference_db/_type.py usr/lib/python3/dist-packages/q2_types/reference_db/tests usr/lib/python3/dist-packages/q2_types/reference_db/tests/__init__.py usr/lib/python3/dist-packages/q2_types/reference_db/tests/data usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/bad_dmnd_db usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/bad_dmnd_db/bad_name.dmnd usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/dmnd_db usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/dmnd_db/ref_db.dmnd usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax/e5.proteomes.faa usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax/e5.taxid_info.tsv usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax_bad usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax_bad/invalid_col.tsv usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax_bad/invalid_rank.tsv usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax_bad/invalid_taxid.tsv usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax_bad/invalid_taxid_lineage.tsv usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/eggnog_seq_tax_bad/too_many_cols.tsv usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/good_eggnog usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/good_eggnog/eggnog.db usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/good_eggnog/eggnog.taxa.db usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/good_eggnog/eggnog.taxa.db.traverse.pkl usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/db-valid usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/db-valid/names.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/db-valid/nodes.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/db-valid/prot.accession2taxid.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/names-non-numeric.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/names-ok.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/names-wrong-cols.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/nodes-non-numeric-other.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/nodes-non-numeric.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/nodes-ok.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/nodes-wrong-cols.dmp usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/too_many_cols.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/wrong_accession.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/wrong_accession_version.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/wrong_col.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/wrong_gi.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/ncbi/wrong_taxid.gz usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/single_eggnog usr/lib/python3/dist-packages/q2_types/reference_db/tests/data/single_eggnog/eggnog.db usr/lib/python3/dist-packages/q2_types/reference_db/tests/test_format.py usr/lib/python3/dist-packages/q2_types/reference_db/tests/test_type.py usr/lib/python3/dist-packages/q2_types/sample_data usr/lib/python3/dist-packages/q2_types/sample_data/__init__.py usr/lib/python3/dist-packages/q2_types/sample_data/_format.py usr/lib/python3/dist-packages/q2_types/sample_data/_transformer.py usr/lib/python3/dist-packages/q2_types/sample_data/_type.py usr/lib/python3/dist-packages/q2_types/sample_data/tests usr/lib/python3/dist-packages/q2_types/sample_data/tests/__init__.py usr/lib/python3/dist-packages/q2_types/sample_data/tests/data usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity-int-indices.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity-jagged-rows.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity-missing-records.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity-one-column.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity-one-sample.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity-with-metadata.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/alpha-diversity.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/data/also-not-alpha-diversity.tsv usr/lib/python3/dist-packages/q2_types/sample_data/tests/test_format.py usr/lib/python3/dist-packages/q2_types/sample_data/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/sample_data/tests/test_type.py usr/lib/python3/dist-packages/q2_types/tree usr/lib/python3/dist-packages/q2_types/tree/__init__.py usr/lib/python3/dist-packages/q2_types/tree/_format.py usr/lib/python3/dist-packages/q2_types/tree/_transformer.py usr/lib/python3/dist-packages/q2_types/tree/_type.py usr/lib/python3/dist-packages/q2_types/tree/tests usr/lib/python3/dist-packages/q2_types/tree/tests/__init__.py usr/lib/python3/dist-packages/q2_types/tree/tests/data usr/lib/python3/dist-packages/q2_types/tree/tests/data/not-tree.nwk usr/lib/python3/dist-packages/q2_types/tree/tests/data/tree.nwk usr/lib/python3/dist-packages/q2_types/tree/tests/test_format.py usr/lib/python3/dist-packages/q2_types/tree/tests/test_transformer.py usr/lib/python3/dist-packages/q2_types/tree/tests/test_type.py usr/lib/python3/dist-packages/q2_types-2024.5.0.egg-info usr/lib/python3/dist-packages/q2_types-2024.5.0.egg-info/PKG-INFO usr/lib/python3/dist-packages/q2_types-2024.5.0.egg-info/dependency_links.txt usr/lib/python3/dist-packages/q2_types-2024.5.0.egg-info/entry_points.txt usr/lib/python3/dist-packages/q2_types-2024.5.0.egg-info/not-zip-safe usr/lib/python3/dist-packages/q2_types-2024.5.0.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/q2-types usr/share/doc/q2-types/changelog.Debian.gz usr/share/doc/q2-types/copyright usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/q2-types