r-bioc-ballgown (2.38.0+dfsg-2)

Details

Core information at a glance

Distribution
debian
Origin
debian-sid
Repository
https://deb.debian.org/debian
Codename
sid
Component
main
Source
none
Architecture
s390x
Section
gnu-r
Priority
optional
Maintainer
Debian R Packages Maintainers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
4.5 kB
Size expected
2.9 MB
Size actual
2.9 MB
Size match

Dependencies

Required package dependencies

  • r-api-4.0
  • r-api-bioc-3.20
  • r-bioc-genomicranges (>= 1.17.25)
  • r-bioc-iranges (>= 1.99.22)
  • r-bioc-s4vectors (>= 0.9.39)
  • r-cran-rcolorbrewer
  • r-bioc-sva
  • r-bioc-limma
  • r-bioc-rtracklayer (>= 1.29.25)
  • r-bioc-biobase (>= 2.25.0)
  • r-bioc-genomeinfodb

Suggested packages

Recommended additional packages

  • r-cran-testthat
  • r-cran-knitr
  • r-cran-markdown

Description

Flexible, isoform-level differential expression analysis

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD50483cedc…615f405b
SHA-1b05c05fc…2bdad450
SHA-256f952f7a6…5096a4c2
SHA-5123fac6312…a73a2d60

Contents

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/ballgown
usr/lib/R/site-library/ballgown/DESCRIPTION
usr/lib/R/site-library/ballgown/INDEX
usr/lib/R/site-library/ballgown/Meta
usr/lib/R/site-library/ballgown/Meta/Rd.rds
usr/lib/R/site-library/ballgown/Meta/data.rds
usr/lib/R/site-library/ballgown/Meta/features.rds
usr/lib/R/site-library/ballgown/Meta/hsearch.rds
usr/lib/R/site-library/ballgown/Meta/links.rds
usr/lib/R/site-library/ballgown/Meta/nsInfo.rds
usr/lib/R/site-library/ballgown/Meta/package.rds
usr/lib/R/site-library/ballgown/Meta/vignette.rds
usr/lib/R/site-library/ballgown/NAMESPACE
usr/lib/R/site-library/ballgown/NEWS
usr/lib/R/site-library/ballgown/R
usr/lib/R/site-library/ballgown/R/ballgown
usr/lib/R/site-library/ballgown/R/ballgown.rdb
usr/lib/R/site-library/ballgown/R/ballgown.rdx
usr/lib/R/site-library/ballgown/data
usr/lib/R/site-library/ballgown/data/bg.rda
usr/lib/R/site-library/ballgown/doc
usr/lib/R/site-library/ballgown/doc/ballgown.R
usr/lib/R/site-library/ballgown/doc/ballgown.Rmd
usr/lib/R/site-library/ballgown/doc/ballgown.html
usr/lib/R/site-library/ballgown/doc/index.html
usr/lib/R/site-library/ballgown/extdata
usr/lib/R/site-library/ballgown/extdata/annot.gtf.gz
usr/lib/R/site-library/ballgown/extdata/hg19_genes_small.gtf.gz
usr/lib/R/site-library/ballgown/extdata/sample01
usr/lib/R/site-library/ballgown/extdata/sample01/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample01/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample01/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample01/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample01/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample02
usr/lib/R/site-library/ballgown/extdata/sample02/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample02/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample02/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample02/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample02/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample03
usr/lib/R/site-library/ballgown/extdata/sample03/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample03/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample03/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample03/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample03/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample04
usr/lib/R/site-library/ballgown/extdata/sample04/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample04/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample04/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample04/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample04/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample05
usr/lib/R/site-library/ballgown/extdata/sample05/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample05/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample05/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample05/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample05/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample06
usr/lib/R/site-library/ballgown/extdata/sample06/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample06/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample06/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample06/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample06/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample07
usr/lib/R/site-library/ballgown/extdata/sample07/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample07/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample07/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample07/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample07/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample08
usr/lib/R/site-library/ballgown/extdata/sample08/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample08/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample08/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample08/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample08/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample09
usr/lib/R/site-library/ballgown/extdata/sample09/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample09/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample09/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample09/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample09/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample10
usr/lib/R/site-library/ballgown/extdata/sample10/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample10/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample10/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample10/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample10/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample11
usr/lib/R/site-library/ballgown/extdata/sample11/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample11/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample11/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample11/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample11/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample12
usr/lib/R/site-library/ballgown/extdata/sample12/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample12/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample12/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample12/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample12/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample13
usr/lib/R/site-library/ballgown/extdata/sample13/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample13/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample13/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample13/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample13/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample14
usr/lib/R/site-library/ballgown/extdata/sample14/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample14/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample14/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample14/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample14/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample15
usr/lib/R/site-library/ballgown/extdata/sample15/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample15/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample15/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample15/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample15/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample16
usr/lib/R/site-library/ballgown/extdata/sample16/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample16/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample16/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample16/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample16/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample17
usr/lib/R/site-library/ballgown/extdata/sample17/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample17/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample17/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample17/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample17/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample18
usr/lib/R/site-library/ballgown/extdata/sample18/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample18/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample18/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample18/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample18/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample19
usr/lib/R/site-library/ballgown/extdata/sample19/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample19/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample19/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample19/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample19/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample20
usr/lib/R/site-library/ballgown/extdata/sample20/e2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample20/e_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample20/i2t.ctab
usr/lib/R/site-library/ballgown/extdata/sample20/i_data.ctab
usr/lib/R/site-library/ballgown/extdata/sample20/t_data.ctab
usr/lib/R/site-library/ballgown/extdata/tiny.genes.results.gz
usr/lib/R/site-library/ballgown/extdata/tiny.isoforms.results.gz
usr/lib/R/site-library/ballgown/extdata/tiny2.genes.results.gz
usr/lib/R/site-library/ballgown/extdata/tiny2.isoforms.results.gz
usr/lib/R/site-library/ballgown/help
usr/lib/R/site-library/ballgown/help/AnIndex
usr/lib/R/site-library/ballgown/help/aliases.rds
usr/lib/R/site-library/ballgown/help/ballgown.rdb
usr/lib/R/site-library/ballgown/help/ballgown.rdx
usr/lib/R/site-library/ballgown/help/paths.rds
usr/lib/R/site-library/ballgown/html
usr/lib/R/site-library/ballgown/html/00Index.html
usr/lib/R/site-library/ballgown/html/R.css
usr/share
usr/share/doc
usr/share/doc/r-bioc-ballgown
usr/share/doc/r-bioc-ballgown/changelog.Debian.gz
usr/share/doc/r-bioc-ballgown/copyright