r-bioc-decoupler (2.12.0+dfsg-2)

Details

Core information at a glance

Distribution: debian
Origin: debian-sid
Repository: https://deb.debian.org/debian
Codename: sid
Component: main
Source: none
Architecture: s390x
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size: 2.2 kB
Size expected: 2.1 MB
Size actual: 2.1 MB
Size match

Dependencies

Required package dependencies

r-api-4.0
r-api-bioc-3.20
r-bioc-biocparallel
r-cran-broom
r-cran-dplyr
r-cran-magrittr
r-cran-matrix
r-cran-parallelly
r-cran-purrr
r-cran-rlang
r-cran-stringr
r-cran-tibble
r-cran-tidyr
r-cran-tidyselect
r-cran-withr

Suggested packages

Recommended additional packages

r-cran-glmnet (>= 4.1-7)
r-bioc-gsva
r-bioc-summarizedexperiment
r-cran-rpart
r-cran-ranger
r-bioc-biocstyle
r-cran-covr
r-cran-knitr
r-cran-pkgdown
r-cran-rmarkdown
r-cran-roxygen2
r-cran-sessioninfo
r-cran-pheatmap
r-cran-testthat
r-cran-seurat
r-cran-ggplot2
r-cran-ggrepel
r-cran-patchwork
r-cran-magick

Description

infer biological activities from omics data

Homepage Download .deb

Checksums

Hash values and integrity verification status

Type	Expected	Actual
MD5	2fc85a61…9eaa4467	2fc85a61…9eaa4467
SHA-1	Not provided	925b596b…cbf12d4e
SHA-256	a548fbdf…58bbac45	a548fbdf…58bbac45
SHA-512	Not provided	91b1a9cc…eb3fc96e

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/decoupleR
usr/lib/R/site-library/decoupleR/CITATION
usr/lib/R/site-library/decoupleR/DESCRIPTION
usr/lib/R/site-library/decoupleR/INDEX
usr/lib/R/site-library/decoupleR/Meta
usr/lib/R/site-library/decoupleR/Meta/Rd.rds
usr/lib/R/site-library/decoupleR/Meta/features.rds
usr/lib/R/site-library/decoupleR/Meta/hsearch.rds
usr/lib/R/site-library/decoupleR/Meta/links.rds
usr/lib/R/site-library/decoupleR/Meta/nsInfo.rds
usr/lib/R/site-library/decoupleR/Meta/package.rds
usr/lib/R/site-library/decoupleR/Meta/vignette.rds
usr/lib/R/site-library/decoupleR/NAMESPACE
usr/lib/R/site-library/decoupleR/NEWS.md
usr/lib/R/site-library/decoupleR/R
usr/lib/R/site-library/decoupleR/R/decoupleR
usr/lib/R/site-library/decoupleR/R/decoupleR.rdb
usr/lib/R/site-library/decoupleR/R/decoupleR.rdx
usr/lib/R/site-library/decoupleR/doc
usr/lib/R/site-library/decoupleR/doc/decoupleR.R
usr/lib/R/site-library/decoupleR/doc/decoupleR.Rmd
usr/lib/R/site-library/decoupleR/doc/index.html
usr/lib/R/site-library/decoupleR/doc/pw_bk.R
usr/lib/R/site-library/decoupleR/doc/pw_bk.Rmd
usr/lib/R/site-library/decoupleR/doc/pw_sc.R
usr/lib/R/site-library/decoupleR/doc/pw_sc.Rmd
usr/lib/R/site-library/decoupleR/doc/tf_bk.R
usr/lib/R/site-library/decoupleR/doc/tf_bk.Rmd
usr/lib/R/site-library/decoupleR/doc/tf_sc.R
usr/lib/R/site-library/decoupleR/doc/tf_sc.Rmd
usr/lib/R/site-library/decoupleR/extdata
usr/lib/R/site-library/decoupleR/extdata/bk_data.rds
usr/lib/R/site-library/decoupleR/extdata/sc_data.rds
usr/lib/R/site-library/decoupleR/figures
usr/lib/R/site-library/decoupleR/figures/graphical_abstract.png
usr/lib/R/site-library/decoupleR/figures/logo.svg
usr/lib/R/site-library/decoupleR/figures/net_plot.png
usr/lib/R/site-library/decoupleR/help
usr/lib/R/site-library/decoupleR/help/AnIndex
usr/lib/R/site-library/decoupleR/help/aliases.rds
usr/lib/R/site-library/decoupleR/help/decoupleR.rdb
usr/lib/R/site-library/decoupleR/help/decoupleR.rdx
usr/lib/R/site-library/decoupleR/help/figures
usr/lib/R/site-library/decoupleR/help/figures/logo.svg
usr/lib/R/site-library/decoupleR/help/paths.rds
usr/lib/R/site-library/decoupleR/html
usr/lib/R/site-library/decoupleR/html/00Index.html
usr/lib/R/site-library/decoupleR/html/R.css
usr/lib/R/site-library/decoupleR/testdata
usr/lib/R/site-library/decoupleR/testdata/README.md
usr/lib/R/site-library/decoupleR/testdata/generate_expected_output.R
usr/lib/R/site-library/decoupleR/testdata/inputs
usr/lib/R/site-library/decoupleR/testdata/inputs/mat.rds
usr/lib/R/site-library/decoupleR/testdata/inputs/net.rds
usr/lib/R/site-library/decoupleR/testdata/outputs
usr/lib/R/site-library/decoupleR/testdata/outputs/aucell
usr/lib/R/site-library/decoupleR/testdata/outputs/aucell/output-aucell.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/decouple
usr/lib/R/site-library/decoupleR/testdata/outputs/decouple/output-decouple.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/fgsea
usr/lib/R/site-library/decoupleR/testdata/outputs/fgsea/output-fgsea.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/gsva
usr/lib/R/site-library/decoupleR/testdata/outputs/gsva/output-gsva.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/mdt
usr/lib/R/site-library/decoupleR/testdata/outputs/mdt/output-mdt.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/mlm
usr/lib/R/site-library/decoupleR/testdata/outputs/mlm/output-mlm.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/ora
usr/lib/R/site-library/decoupleR/testdata/outputs/ora/output-ora.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/udt
usr/lib/R/site-library/decoupleR/testdata/outputs/udt/output-udt.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/ulm
usr/lib/R/site-library/decoupleR/testdata/outputs/ulm/output-ulm.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/viper
usr/lib/R/site-library/decoupleR/testdata/outputs/viper/output-viper.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/wmean
usr/lib/R/site-library/decoupleR/testdata/outputs/wmean/output-wmean.rds
usr/lib/R/site-library/decoupleR/testdata/outputs/wsum
usr/lib/R/site-library/decoupleR/testdata/outputs/wsum/output-wsum.rds
usr/share
usr/share/doc
usr/share/doc/r-bioc-decoupler
usr/share/doc/r-bioc-decoupler/changelog.Debian.gz
usr/share/doc/r-bioc-decoupler/copyright