r-bioc-degnorm (1.16.0+ds-2)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- gnu-r
- Priority
- optional
- Maintainer
- Debian R Packages Maintainers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3.1 kB
- Size expected
- 1.5 MB
- Size actual
- 1.5 MB
- Size match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-cran-rcpp (>= 1.0.2)
- r-bioc-genomicfeatures
- r-bioc-txdbmaker
- r-cran-foreach
- r-bioc-s4vectors
- r-cran-doparallel
- r-bioc-rsamtools (>= 1.31.2)
- r-bioc-genomicalignments
- r-cran-heatmaply
- r-cran-data.table
- r-cran-ggplot2
- r-bioc-genomicranges
- r-bioc-iranges
- r-cran-plyr
- r-cran-plotly
- r-cran-viridis
- r-cran-rcpparmadillo
- libblas3 | libblas.so.3
- libc6 (>= 2.29)
- libgcc-s1 (>= 3.0)
- libgomp1 (>= 4.9)
- libstdc++6 (>= 14)
Description
DegNorm: degradation normalization for RNA-seq data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | e7c67b38…c72de063 | |
| SHA-1 | 9819eedb…dc0a93f0 | |
| SHA-256 | 2093df26…d4b17a09 | |
| SHA-512 | de01b82f…13cbf450 |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/DegNorm usr/lib/R/site-library/DegNorm/DESCRIPTION usr/lib/R/site-library/DegNorm/INDEX usr/lib/R/site-library/DegNorm/Meta usr/lib/R/site-library/DegNorm/Meta/Rd.rds usr/lib/R/site-library/DegNorm/Meta/data.rds usr/lib/R/site-library/DegNorm/Meta/features.rds usr/lib/R/site-library/DegNorm/Meta/hsearch.rds usr/lib/R/site-library/DegNorm/Meta/links.rds usr/lib/R/site-library/DegNorm/Meta/nsInfo.rds usr/lib/R/site-library/DegNorm/Meta/package.rds usr/lib/R/site-library/DegNorm/Meta/vignette.rds usr/lib/R/site-library/DegNorm/NAMESPACE usr/lib/R/site-library/DegNorm/NEWS usr/lib/R/site-library/DegNorm/R usr/lib/R/site-library/DegNorm/R/DegNorm usr/lib/R/site-library/DegNorm/R/DegNorm.rdb usr/lib/R/site-library/DegNorm/R/DegNorm.rdx usr/lib/R/site-library/DegNorm/data usr/lib/R/site-library/DegNorm/data/coverage_res_chr21.RData usr/lib/R/site-library/DegNorm/data/res_DegNorm_chr21.RData usr/lib/R/site-library/DegNorm/doc usr/lib/R/site-library/DegNorm/doc/DegNorm.R usr/lib/R/site-library/DegNorm/doc/DegNorm.Rmd usr/lib/R/site-library/DegNorm/doc/index.html usr/lib/R/site-library/DegNorm/extdata usr/lib/R/site-library/DegNorm/extdata/SRR873822_chr21_9900000-10000000.bam usr/lib/R/site-library/DegNorm/extdata/SRR873834_chr21_9900000-10000000.bam usr/lib/R/site-library/DegNorm/extdata/SRR873838_chr21_9900000-10000000.bam usr/lib/R/site-library/DegNorm/extdata/genes_chr21.gtf usr/lib/R/site-library/DegNorm/help usr/lib/R/site-library/DegNorm/help/AnIndex usr/lib/R/site-library/DegNorm/help/DegNorm.rdb usr/lib/R/site-library/DegNorm/help/DegNorm.rdx usr/lib/R/site-library/DegNorm/help/aliases.rds usr/lib/R/site-library/DegNorm/help/paths.rds usr/lib/R/site-library/DegNorm/html usr/lib/R/site-library/DegNorm/html/00Index.html usr/lib/R/site-library/DegNorm/html/R.css usr/lib/R/site-library/DegNorm/libs usr/lib/R/site-library/DegNorm/libs/DegNorm.so usr/lib/R/site-library/DegNorm/script usr/lib/R/site-library/DegNorm/script/script.txt usr/share usr/share/doc usr/share/doc/r-bioc-degnorm usr/share/doc/r-bioc-degnorm/changelog.Debian.gz usr/share/doc/r-bioc-degnorm/copyright