r-bioc-dexseq (1.52.0+dfsg-2)

Details

Core information at a glance

Distribution
debian
Origin
debian-sid
Repository
https://deb.debian.org/debian
Codename
sid
Component
main
Source
none
Architecture
s390x
Section
gnu-r
Priority
optional
Maintainer
Debian R Packages Maintainers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
678 B
Size expected
456 kB
Size actual
456 kB
Size match

Dependencies

Required package dependencies

  • r-api-4.0
  • r-api-bioc-3.20
  • r-bioc-biocparallel
  • r-bioc-biobase
  • r-bioc-summarizedexperiment
  • r-bioc-iranges (>= 2.5.17)
  • r-bioc-genomicranges (>= 1.23.7)
  • r-bioc-deseq2 (>= 1.39.6)
  • r-bioc-annotationdbi
  • r-cran-rcolorbrewer
  • r-bioc-s4vectors (>= 0.23.18)
  • r-bioc-biocgenerics
  • r-bioc-biomart
  • r-cran-hwriter
  • r-cran-stringr
  • r-bioc-rsamtools
  • r-cran-statmod
  • r-bioc-geneplotter
  • r-bioc-genefilter

Suggested packages

Recommended additional packages

  • r-bioc-genomicfeatures
  • r-bioc-txdbmaker
  • r-bioc-biocstyle
  • r-cran-knitr
  • r-cran-rmarkdown
  • r-cran-testthat
  • r-bioc-genomicalignments
  • r-cran-roxygen2
  • r-bioc-glmgampoi

Description

GNU R inference of differential exon usage in RNA-Seq

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5ebefb12f…8076ac5f
SHA-1e7d10e95…8e3791b0
SHA-2564bdbc37e…d0c2ec67
SHA-5123408a5cc…a5df94b6

Contents

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/DEXSeq
usr/lib/R/site-library/DEXSeq/CITATION
usr/lib/R/site-library/DEXSeq/DESCRIPTION
usr/lib/R/site-library/DEXSeq/INDEX
usr/lib/R/site-library/DEXSeq/Meta
usr/lib/R/site-library/DEXSeq/Meta/Rd.rds
usr/lib/R/site-library/DEXSeq/Meta/features.rds
usr/lib/R/site-library/DEXSeq/Meta/hsearch.rds
usr/lib/R/site-library/DEXSeq/Meta/links.rds
usr/lib/R/site-library/DEXSeq/Meta/nsInfo.rds
usr/lib/R/site-library/DEXSeq/Meta/package.rds
usr/lib/R/site-library/DEXSeq/Meta/vignette.rds
usr/lib/R/site-library/DEXSeq/NAMESPACE
usr/lib/R/site-library/DEXSeq/NEWS
usr/lib/R/site-library/DEXSeq/R
usr/lib/R/site-library/DEXSeq/R/DEXSeq
usr/lib/R/site-library/DEXSeq/R/DEXSeq.rdb
usr/lib/R/site-library/DEXSeq/R/DEXSeq.rdx
usr/lib/R/site-library/DEXSeq/doc
usr/lib/R/site-library/DEXSeq/doc/DEXSeq.R
usr/lib/R/site-library/DEXSeq/doc/DEXSeq.Rmd
usr/lib/R/site-library/DEXSeq/doc/index.html
usr/lib/R/site-library/DEXSeq/help
usr/lib/R/site-library/DEXSeq/help/AnIndex
usr/lib/R/site-library/DEXSeq/help/DEXSeq.rdb
usr/lib/R/site-library/DEXSeq/help/DEXSeq.rdx
usr/lib/R/site-library/DEXSeq/help/aliases.rds
usr/lib/R/site-library/DEXSeq/help/paths.rds
usr/lib/R/site-library/DEXSeq/html
usr/lib/R/site-library/DEXSeq/html/00Index.html
usr/lib/R/site-library/DEXSeq/html/R.css
usr/lib/R/site-library/DEXSeq/python_scripts
usr/lib/R/site-library/DEXSeq/python_scripts/dexseq_count.py
usr/lib/R/site-library/DEXSeq/python_scripts/dexseq_prepare_annotation.py
usr/share
usr/share/doc
usr/share/doc/r-bioc-dexseq
usr/share/doc/r-bioc-dexseq/changelog.Debian.gz
usr/share/doc/r-bioc-dexseq/copyright