r-bioc-gsva (2.0.5+ds-1)

Details

Core information at a glance

Distribution
debian
Origin
debian-sid
Repository
https://deb.debian.org/debian
Codename
sid
Component
main
Source
none
Architecture
s390x
Section
gnu-r
Priority
optional
Maintainer
Debian R Packages Maintainers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
1.5 kB
Size expected
1.3 MB
Size actual
1.3 MB
Size match

Dependencies

Required package dependencies

  • r-api-4.0
  • r-api-bioc-3.20
  • r-bioc-s4vectors
  • r-bioc-iranges
  • r-bioc-biobase
  • r-bioc-summarizedexperiment
  • r-bioc-gseabase
  • r-cran-matrix (>= 1.5-0)
  • r-bioc-biocparallel
  • r-bioc-singlecellexperiment
  • r-bioc-spatialexperiment
  • r-bioc-sparsematrixstats
  • r-bioc-delayedarray
  • r-bioc-delayedmatrixstats
  • r-bioc-hdf5array
  • r-bioc-biocsingular
  • r-cran-cli
  • libc6 (>= 2.4)

Suggested packages

Recommended additional packages

  • r-bioc-biocgenerics
  • r-cran-runit
  • r-bioc-biocstyle
  • r-cran-knitr
  • r-cran-rmarkdown
  • r-bioc-limma
  • r-cran-rcolorbrewer
  • r-bioc-org.hs.eg.db
  • r-bioc-genefilter
  • r-bioc-edger
  • r-bioc-gsvadata
  • r-cran-shiny
  • r-cran-shinydashboard
  • r-cran-ggplot2
  • r-cran-data.table
  • r-cran-plotly
  • r-cran-future
  • r-cran-promises
  • r-cran-shinyjs

Description

Gene Set Variation Analysis for microarray and RNA-seq data

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5226d57da…988e811a
SHA-16a0128b0…8fc13fc2
SHA-2560995b602…9211a15d
SHA-5127f397739…bb28a064

Contents

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/GSVA
usr/lib/R/site-library/GSVA/CITATION
usr/lib/R/site-library/GSVA/DESCRIPTION
usr/lib/R/site-library/GSVA/INDEX
usr/lib/R/site-library/GSVA/Meta
usr/lib/R/site-library/GSVA/Meta/Rd.rds
usr/lib/R/site-library/GSVA/Meta/features.rds
usr/lib/R/site-library/GSVA/Meta/hsearch.rds
usr/lib/R/site-library/GSVA/Meta/links.rds
usr/lib/R/site-library/GSVA/Meta/nsInfo.rds
usr/lib/R/site-library/GSVA/Meta/package.rds
usr/lib/R/site-library/GSVA/Meta/vignette.rds
usr/lib/R/site-library/GSVA/NAMESPACE
usr/lib/R/site-library/GSVA/NEWS
usr/lib/R/site-library/GSVA/R
usr/lib/R/site-library/GSVA/R/GSVA
usr/lib/R/site-library/GSVA/R/GSVA.rdb
usr/lib/R/site-library/GSVA/R/GSVA.rdx
usr/lib/R/site-library/GSVA/doc
usr/lib/R/site-library/GSVA/doc/GSVA.R
usr/lib/R/site-library/GSVA/doc/GSVA.Rmd
usr/lib/R/site-library/GSVA/doc/index.html
usr/lib/R/site-library/GSVA/extdata
usr/lib/R/site-library/GSVA/extdata/cache4vignette_leukemia_es.RData
usr/lib/R/site-library/GSVA/help
usr/lib/R/site-library/GSVA/help/AnIndex
usr/lib/R/site-library/GSVA/help/GSVA.rdb
usr/lib/R/site-library/GSVA/help/GSVA.rdx
usr/lib/R/site-library/GSVA/help/aliases.rds
usr/lib/R/site-library/GSVA/help/paths.rds
usr/lib/R/site-library/GSVA/html
usr/lib/R/site-library/GSVA/html/00Index.html
usr/lib/R/site-library/GSVA/html/R.css
usr/lib/R/site-library/GSVA/libs
usr/lib/R/site-library/GSVA/libs/GSVA.so
usr/lib/R/site-library/GSVA/shinyApp
usr/lib/R/site-library/GSVA/shinyApp/argumentsDataModule.R
usr/lib/R/site-library/GSVA/shinyApp/closeModule.R
usr/lib/R/site-library/GSVA/shinyApp/downloadModule.R
usr/lib/R/site-library/GSVA/shinyApp/geneSetsModule.R
usr/lib/R/site-library/GSVA/shinyApp/global.R
usr/lib/R/site-library/GSVA/shinyApp/matrixModule.R
usr/lib/R/site-library/GSVA/shinyApp/modalGSVAModule.R
usr/lib/R/site-library/GSVA/shinyApp/plot1_Module.R
usr/lib/R/site-library/GSVA/shinyApp/plot2_Module.R
usr/lib/R/site-library/GSVA/shinyApp/plot3_Module.R
usr/lib/R/site-library/GSVA/shinyApp/server.R
usr/lib/R/site-library/GSVA/shinyApp/ui.R
usr/lib/R/site-library/GSVA/shinyApp/www
usr/lib/R/site-library/GSVA/shinyApp/www/GSVA.png
usr/lib/R/site-library/GSVA/shinyApp/www/style.css
usr/lib/R/site-library/GSVA/unitTests
usr/lib/R/site-library/GSVA/unitTests/test_gsvaCcode.R
usr/lib/R/site-library/GSVA/unitTests/test_gsvaRanks.R
usr/lib/R/site-library/GSVA/unitTests/test_inputdatacontainers.R
usr/lib/R/site-library/GSVA/unitTests/test_newAPI.R
usr/lib/R/site-library/GSVA/unitTests/test_params.R
usr/lib/R/site-library/GSVA/unitTests/test_sparse.R
usr/lib/R/site-library/GSVA/unitTests/test_ssgsea.R
usr/share
usr/share/doc
usr/share/doc/r-bioc-gsva
usr/share/doc/r-bioc-gsva/changelog.Debian.gz
usr/share/doc/r-bioc-gsva/copyright