r-bioc-gviz (1.50.0+dfsg-3)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- gnu-r
- Priority
- optional
- Maintainer
- Debian R Packages Maintainers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 7 kB
- Size expected
- 5.2 MB
- Size actual
- 5.2 MB
- Size match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-bioc-s4vectors (>= 0.9.25)
- r-bioc-iranges (>= 1.99.18)
- r-bioc-genomicranges (>= 1.17.20)
- r-bioc-xvector (>= 0.5.7)
- r-bioc-rtracklayer (>= 1.25.13)
- r-cran-lattice
- r-cran-rcolorbrewer
- r-bioc-biomart (>= 2.11.0)
- r-bioc-annotationdbi (>= 1.27.5)
- r-bioc-biobase (>= 2.15.3)
- r-bioc-genomicfeatures (>= 1.17.22)
- r-bioc-ensembldb (>= 2.11.3)
- r-bioc-bsgenome (>= 1.33.1)
- r-bioc-biostrings (>= 2.33.11)
- r-bioc-biovizbase (>= 1.13.8)
- r-bioc-rsamtools (>= 1.17.28)
- r-cran-latticeextra (>= 0.6-26)
- r-cran-matrixstats (>= 0.8.14)
- r-bioc-genomicalignments (>= 1.1.16)
- r-bioc-genomeinfodb (>= 1.1.3)
- r-bioc-biocgenerics (>= 0.11.3)
- r-cran-digest (>= 0.6.8)
Description
Plotting data and annotation information along genomic coordinates
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 1b3b05ed…7c226610 | |
| SHA-1 | 1775cd2a…4623f5b1 | |
| SHA-256 | 685dc107…ab6117b3 | |
| SHA-512 | 63ee7f74…ff273f97 |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/Gviz usr/lib/R/site-library/Gviz/CITATION usr/lib/R/site-library/Gviz/DESCRIPTION usr/lib/R/site-library/Gviz/INDEX usr/lib/R/site-library/Gviz/Meta usr/lib/R/site-library/Gviz/Meta/Rd.rds usr/lib/R/site-library/Gviz/Meta/data.rds usr/lib/R/site-library/Gviz/Meta/features.rds usr/lib/R/site-library/Gviz/Meta/hsearch.rds usr/lib/R/site-library/Gviz/Meta/links.rds usr/lib/R/site-library/Gviz/Meta/nsInfo.rds usr/lib/R/site-library/Gviz/Meta/package.rds usr/lib/R/site-library/Gviz/Meta/vignette.rds usr/lib/R/site-library/Gviz/NAMESPACE usr/lib/R/site-library/Gviz/NEWS usr/lib/R/site-library/Gviz/R usr/lib/R/site-library/Gviz/R/Gviz usr/lib/R/site-library/Gviz/R/Gviz.rdb usr/lib/R/site-library/Gviz/R/Gviz.rdx usr/lib/R/site-library/Gviz/data usr/lib/R/site-library/Gviz/data/alTrackGenes.rda usr/lib/R/site-library/Gviz/data/biomTrack.rda usr/lib/R/site-library/Gviz/data/biomTrack2.rda usr/lib/R/site-library/Gviz/data/bmTrack.rda usr/lib/R/site-library/Gviz/data/collapseTrack.rda usr/lib/R/site-library/Gviz/data/cpgIslands.rda usr/lib/R/site-library/Gviz/data/cyp2b10.rda usr/lib/R/site-library/Gviz/data/denseAnnTrack.rda usr/lib/R/site-library/Gviz/data/dtHoriz.rda usr/lib/R/site-library/Gviz/data/geneDetails.rda usr/lib/R/site-library/Gviz/data/geneModels.rda usr/lib/R/site-library/Gviz/data/idTrack.rda usr/lib/R/site-library/Gviz/data/ideoTrack.rda usr/lib/R/site-library/Gviz/data/itrack.rda usr/lib/R/site-library/Gviz/data/twoGroups.rda usr/lib/R/site-library/Gviz/data/ucscItems.rda usr/lib/R/site-library/Gviz/doc usr/lib/R/site-library/Gviz/doc/Gviz.R usr/lib/R/site-library/Gviz/doc/Gviz.Rmd usr/lib/R/site-library/Gviz/doc/index.html usr/lib/R/site-library/Gviz/extdata usr/lib/R/site-library/Gviz/extdata/GSM461176_S2_DRSC_Untreated_1_bmm.bam usr/lib/R/site-library/Gviz/extdata/GSM461176_S2_DRSC_Untreated_1_bmm.bam.bai usr/lib/R/site-library/Gviz/extdata/GSM461179_S2_DRSC_CG8144_RNAi_1_bmm.bam usr/lib/R/site-library/Gviz/extdata/GSM461179_S2_DRSC_CG8144_RNAi_1_bmm.bam.bai usr/lib/R/site-library/Gviz/extdata/biomartVersionsLatest.txt usr/lib/R/site-library/Gviz/extdata/biomartVersionsNow.txt usr/lib/R/site-library/Gviz/extdata/gapped.bam usr/lib/R/site-library/Gviz/extdata/gapped.bam.bai usr/lib/R/site-library/Gviz/extdata/indels.bam usr/lib/R/site-library/Gviz/extdata/indels.bam.bai usr/lib/R/site-library/Gviz/extdata/snps.bam usr/lib/R/site-library/Gviz/extdata/snps.bam.bai usr/lib/R/site-library/Gviz/extdata/test.2bit usr/lib/R/site-library/Gviz/extdata/test.bam usr/lib/R/site-library/Gviz/extdata/test.bam.bai usr/lib/R/site-library/Gviz/extdata/test.bed usr/lib/R/site-library/Gviz/extdata/test.bedGraph usr/lib/R/site-library/Gviz/extdata/test.bw usr/lib/R/site-library/Gviz/extdata/test.fa usr/lib/R/site-library/Gviz/extdata/test.fa.fai usr/lib/R/site-library/Gviz/extdata/test.gff usr/lib/R/site-library/Gviz/extdata/test.gff1 usr/lib/R/site-library/Gviz/extdata/test.gff2 usr/lib/R/site-library/Gviz/extdata/test.gff3 usr/lib/R/site-library/Gviz/extdata/test.gtf usr/lib/R/site-library/Gviz/extdata/test.wig usr/lib/R/site-library/Gviz/help usr/lib/R/site-library/Gviz/help/AnIndex usr/lib/R/site-library/Gviz/help/Gviz.rdb usr/lib/R/site-library/Gviz/help/Gviz.rdx usr/lib/R/site-library/Gviz/help/aliases.rds usr/lib/R/site-library/Gviz/help/paths.rds usr/lib/R/site-library/Gviz/html usr/lib/R/site-library/Gviz/html/00Index.html usr/lib/R/site-library/Gviz/html/R.css usr/lib/R/site-library/Gviz/scripts usr/lib/R/site-library/Gviz/scripts/documentation.R usr/lib/R/site-library/Gviz/scripts/testBiomartGenomeMappings.R usr/lib/R/site-library/Gviz/scripts/updateBiomartGenomeMappings.R usr/share usr/share/doc usr/share/doc/r-bioc-gviz usr/share/doc/r-bioc-gviz/changelog.Debian.gz usr/share/doc/r-bioc-gviz/copyright usr/share/doc/r-bioc-gviz/examples usr/share/doc/r-bioc-gviz/examples/vignettes usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz-example.png usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz-logo.png usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz-refs.bib usr/share/doc/r-bioc-gviz/examples/vignettes/Gviz.Rmd usr/share/doc/r-bioc-gviz/examples/vignettes/ucsc1.png usr/share/doc/r-bioc-gviz/examples/vignettes/ucsc2.png