r-bioc-megadepth (1.16.0+ds-2)

Details

Core information at a glance

Distribution
debian
Origin
debian-sid
Repository
https://deb.debian.org/debian
Codename
sid
Component
main
Source
none
Architecture
s390x
Section
gnu-r
Priority
optional
Maintainer
Debian R Packages Maintainers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
166 B
Size expected
86.3 kB
Size actual
86.3 kB
Size match

Dependencies

Required package dependencies

  • r-api-4.0
  • r-api-bioc-3.20
  • r-cran-xfun
  • r-cran-fs
  • r-bioc-genomicranges
  • r-cran-readr
  • r-cran-cmdfun
  • r-cran-dplyr
  • r-cran-magrittr
  • megadepth

Suggested packages

Recommended additional packages

  • r-cran-covr
  • r-cran-knitr
  • r-bioc-biocstyle
  • r-cran-sessioninfo
  • r-cran-rmarkdown
  • r-bioc-rtracklayer
  • r-bioc-genomeinfodb
  • r-cran-testthat

Description

BioCOnductor BigWig and BAM related utilities

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD55cb32be6…2e3cc861
SHA-1001f86a7…bf45663c
SHA-25690f549e1…b86e0add
SHA-512e66fc01d…ccfa73dd

Contents

Files and directories included

.
usr
usr/lib
usr/lib/R
usr/lib/R/site-library
usr/lib/R/site-library/megadepth
usr/lib/R/site-library/megadepth/CITATION
usr/lib/R/site-library/megadepth/DESCRIPTION
usr/lib/R/site-library/megadepth/INDEX
usr/lib/R/site-library/megadepth/Meta
usr/lib/R/site-library/megadepth/Meta/Rd.rds
usr/lib/R/site-library/megadepth/Meta/features.rds
usr/lib/R/site-library/megadepth/Meta/hsearch.rds
usr/lib/R/site-library/megadepth/Meta/links.rds
usr/lib/R/site-library/megadepth/Meta/nsInfo.rds
usr/lib/R/site-library/megadepth/Meta/package.rds
usr/lib/R/site-library/megadepth/Meta/vignette.rds
usr/lib/R/site-library/megadepth/NAMESPACE
usr/lib/R/site-library/megadepth/NEWS.md
usr/lib/R/site-library/megadepth/R
usr/lib/R/site-library/megadepth/R/megadepth
usr/lib/R/site-library/megadepth/R/megadepth.rdb
usr/lib/R/site-library/megadepth/R/megadepth.rdx
usr/lib/R/site-library/megadepth/doc
usr/lib/R/site-library/megadepth/doc/index.html
usr/lib/R/site-library/megadepth/doc/megadepth.R
usr/lib/R/site-library/megadepth/doc/megadepth.Rmd
usr/lib/R/site-library/megadepth/help
usr/lib/R/site-library/megadepth/help/AnIndex
usr/lib/R/site-library/megadepth/help/aliases.rds
usr/lib/R/site-library/megadepth/help/megadepth.rdb
usr/lib/R/site-library/megadepth/help/megadepth.rdx
usr/lib/R/site-library/megadepth/help/paths.rds
usr/lib/R/site-library/megadepth/html
usr/lib/R/site-library/megadepth/html/00Index.html
usr/lib/R/site-library/megadepth/html/R.css
usr/lib/R/site-library/megadepth/tests
usr/lib/R/site-library/megadepth/tests/long_reads.bam
usr/lib/R/site-library/megadepth/tests/test.bam
usr/lib/R/site-library/megadepth/tests/test.bam.all.bw
usr/lib/R/site-library/megadepth/tests/test.bam.bai
usr/lib/R/site-library/megadepth/tests/test2.bam
usr/lib/R/site-library/megadepth/tests/test3.bam
usr/lib/R/site-library/megadepth/tests/test_exons.bed
usr/lib/R/site-library/megadepth/tests/test_output_files
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.all.bw
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.alts.tsv
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.annotation.tsv
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.ends.tsv
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.frags.tsv
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.softclip.tsv
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.starts.tsv
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.unique.bw
usr/lib/R/site-library/megadepth/tests/test_output_files/test.bam.unique.tsv
usr/lib/R/site-library/megadepth/tests/testbw2.bed
usr/share
usr/share/doc
usr/share/doc/r-bioc-megadepth
usr/share/doc/r-bioc-megadepth/changelog.Debian.gz
usr/share/doc/r-bioc-megadepth/copyright