r-bioc-tcgabiolinks (2.34.1+dfsg-1)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- gnu-r
- Priority
- optional
- Maintainer
- Debian R Packages Maintainers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 6.6 kB
- Size expected
- 6.3 MB
- Size actual
- 6.3 MB
- Size match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-cran-downloader (>= 0.4)
- r-bioc-biomart
- r-cran-dplyr
- r-cran-tibble
- r-bioc-genomicranges
- r-cran-xml (>= 3.98.0)
- r-cran-data.table
- r-cran-jsonlite (>= 1.0.0)
- r-cran-plyr
- r-cran-knitr
- r-cran-ggplot2
- r-cran-stringr (>= 1.0.0)
- r-bioc-iranges
- r-cran-rvest (>= 0.3.0)
- r-bioc-s4vectors
- r-cran-r.utils
- r-bioc-summarizedexperiment (>= 1.4.0)
- r-bioc-tcgabiolinksgui.data (>= 1.15.1)
- r-cran-readr
- r-cran-tidyr
- r-cran-purrr
- r-cran-xml2
- r-cran-httr (>= 1.2.1)
Suggested packages
Recommended additional packages
- r-cran-jpeg
- r-cran-png
- r-bioc-biocstyle
- r-cran-rmarkdown
- r-cran-devtools
- r-cran-parmigene
- r-bioc-biobase
- r-bioc-affy
- r-cran-testthat
- r-bioc-annotationhub
- r-bioc-experimenthub
- r-cran-seurat
- r-bioc-complexheatmap
- r-cran-circlize
- r-bioc-consensusclusterplus
- r-cran-igraph
- r-bioc-limma
- r-bioc-edger
- r-bioc-sva
- r-bioc-edaseq
- r-cran-survminer
- r-bioc-genefilter
- r-cran-gridextra
- r-cran-survival
- r-cran-doparallel
- r-cran-ggrepel (>= 0.6.3)
- r-cran-scales
- r-cran-dt
Description
GNU R/Bioconductor package for integrative analysis with GDC data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 6a8f89c7…dca4bae9 | |
| SHA-1 | 7116e71f…81bd54b8 | |
| SHA-256 | e8b70555…ec05af28 | |
| SHA-512 | 38e8d7d1…6b3eb075 |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/TCGAbiolinks usr/lib/R/site-library/TCGAbiolinks/CITATION usr/lib/R/site-library/TCGAbiolinks/DESCRIPTION usr/lib/R/site-library/TCGAbiolinks/INDEX usr/lib/R/site-library/TCGAbiolinks/Meta usr/lib/R/site-library/TCGAbiolinks/Meta/Rd.rds usr/lib/R/site-library/TCGAbiolinks/Meta/data.rds usr/lib/R/site-library/TCGAbiolinks/Meta/features.rds usr/lib/R/site-library/TCGAbiolinks/Meta/hsearch.rds usr/lib/R/site-library/TCGAbiolinks/Meta/links.rds usr/lib/R/site-library/TCGAbiolinks/Meta/nsInfo.rds usr/lib/R/site-library/TCGAbiolinks/Meta/package.rds usr/lib/R/site-library/TCGAbiolinks/Meta/vignette.rds usr/lib/R/site-library/TCGAbiolinks/NAMESPACE usr/lib/R/site-library/TCGAbiolinks/NEWS usr/lib/R/site-library/TCGAbiolinks/R usr/lib/R/site-library/TCGAbiolinks/R/TCGAbiolinks usr/lib/R/site-library/TCGAbiolinks/R/TCGAbiolinks.rdb usr/lib/R/site-library/TCGAbiolinks/R/TCGAbiolinks.rdx usr/lib/R/site-library/TCGAbiolinks/R/sysdata.rdb usr/lib/R/site-library/TCGAbiolinks/R/sysdata.rdx usr/lib/R/site-library/TCGAbiolinks/data usr/lib/R/site-library/TCGAbiolinks/data/Rdata.rdb usr/lib/R/site-library/TCGAbiolinks/data/Rdata.rds usr/lib/R/site-library/TCGAbiolinks/data/Rdata.rdx usr/lib/R/site-library/TCGAbiolinks/data/datalist usr/lib/R/site-library/TCGAbiolinks/doc usr/lib/R/site-library/TCGAbiolinks/doc/analysis.R usr/lib/R/site-library/TCGAbiolinks/doc/analysis.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/casestudy.R usr/lib/R/site-library/TCGAbiolinks/doc/casestudy.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/classifiers.R usr/lib/R/site-library/TCGAbiolinks/doc/classifiers.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/clinical.R usr/lib/R/site-library/TCGAbiolinks/doc/clinical.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/download_prepare.R usr/lib/R/site-library/TCGAbiolinks/doc/download_prepare.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/extension.R usr/lib/R/site-library/TCGAbiolinks/doc/extension.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/index.R usr/lib/R/site-library/TCGAbiolinks/doc/index.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/index.html usr/lib/R/site-library/TCGAbiolinks/doc/mutation.R usr/lib/R/site-library/TCGAbiolinks/doc/mutation.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/query.R usr/lib/R/site-library/TCGAbiolinks/doc/query.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/stemness_score.R usr/lib/R/site-library/TCGAbiolinks/doc/stemness_score.Rmd usr/lib/R/site-library/TCGAbiolinks/doc/subtypes.R usr/lib/R/site-library/TCGAbiolinks/doc/subtypes.Rmd usr/lib/R/site-library/TCGAbiolinks/help usr/lib/R/site-library/TCGAbiolinks/help/AnIndex usr/lib/R/site-library/TCGAbiolinks/help/TCGAbiolinks.rdb usr/lib/R/site-library/TCGAbiolinks/help/TCGAbiolinks.rdx usr/lib/R/site-library/TCGAbiolinks/help/aliases.rds usr/lib/R/site-library/TCGAbiolinks/help/paths.rds usr/lib/R/site-library/TCGAbiolinks/html usr/lib/R/site-library/TCGAbiolinks/html/00Index.html usr/lib/R/site-library/TCGAbiolinks/html/R.css usr/share usr/share/doc usr/share/doc/r-bioc-tcgabiolinks usr/share/doc/r-bioc-tcgabiolinks/changelog.Debian.gz usr/share/doc/r-bioc-tcgabiolinks/copyright