r-cran-phangorn (2.12.1+dfsg-1)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- gnu-r
- Priority
- optional
- Maintainer
- Debian R Packages Maintainers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3.1 kB
- Size expected
- 1.8 MB
- Size actual
- 1.8 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
GNU R package for phylogenetic analysis
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 00e17bb0…5feaface | |
| SHA-1 | 6ca22333…d396e69a | |
| SHA-256 | c1730833…1b59d185 | |
| SHA-512 | 2e62ab0d…e62f3984 |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/phangorn usr/lib/R/site-library/phangorn/CITATION usr/lib/R/site-library/phangorn/DESCRIPTION usr/lib/R/site-library/phangorn/INDEX usr/lib/R/site-library/phangorn/Meta usr/lib/R/site-library/phangorn/Meta/Rd.rds usr/lib/R/site-library/phangorn/Meta/data.rds usr/lib/R/site-library/phangorn/Meta/features.rds usr/lib/R/site-library/phangorn/Meta/hsearch.rds usr/lib/R/site-library/phangorn/Meta/links.rds usr/lib/R/site-library/phangorn/Meta/nsInfo.rds usr/lib/R/site-library/phangorn/Meta/package.rds usr/lib/R/site-library/phangorn/Meta/vignette.rds usr/lib/R/site-library/phangorn/NAMESPACE usr/lib/R/site-library/phangorn/NEWS usr/lib/R/site-library/phangorn/R usr/lib/R/site-library/phangorn/R/phangorn usr/lib/R/site-library/phangorn/R/phangorn.rdb usr/lib/R/site-library/phangorn/R/phangorn.rdx usr/lib/R/site-library/phangorn/R/sysdata.rdb usr/lib/R/site-library/phangorn/R/sysdata.rdx usr/lib/R/site-library/phangorn/README usr/lib/R/site-library/phangorn/data usr/lib/R/site-library/phangorn/data/Laurasiatherian.RData usr/lib/R/site-library/phangorn/data/chloroplast.RData usr/lib/R/site-library/phangorn/data/mites.RData usr/lib/R/site-library/phangorn/data/yeast.RData usr/lib/R/site-library/phangorn/doc usr/lib/R/site-library/phangorn/doc/AdvancedFeatures.R usr/lib/R/site-library/phangorn/doc/AdvancedFeatures.Rmd usr/lib/R/site-library/phangorn/doc/Ancestral.R usr/lib/R/site-library/phangorn/doc/Ancestral.Rmd usr/lib/R/site-library/phangorn/doc/IntertwiningTreesAndNetworks.R usr/lib/R/site-library/phangorn/doc/IntertwiningTreesAndNetworks.Rmd usr/lib/R/site-library/phangorn/doc/MLbyHand.R usr/lib/R/site-library/phangorn/doc/MLbyHand.Rmd usr/lib/R/site-library/phangorn/doc/Morphological.R usr/lib/R/site-library/phangorn/doc/Morphological.Rmd usr/lib/R/site-library/phangorn/doc/Networx.R usr/lib/R/site-library/phangorn/doc/Networx.Rmd usr/lib/R/site-library/phangorn/doc/Trees.R usr/lib/R/site-library/phangorn/doc/Trees.Rmd usr/lib/R/site-library/phangorn/doc/index.html usr/lib/R/site-library/phangorn/extdata usr/lib/R/site-library/phangorn/extdata/Blosum62.dat usr/lib/R/site-library/phangorn/extdata/Dayhoff.dat usr/lib/R/site-library/phangorn/extdata/FLU.dat usr/lib/R/site-library/phangorn/extdata/HIVb.dat usr/lib/R/site-library/phangorn/extdata/HIVw.dat usr/lib/R/site-library/phangorn/extdata/JTT.dat usr/lib/R/site-library/phangorn/extdata/MtZoa.dat usr/lib/R/site-library/phangorn/extdata/RtREV.dat usr/lib/R/site-library/phangorn/extdata/VT.dat usr/lib/R/site-library/phangorn/extdata/cpREV.dat usr/lib/R/site-library/phangorn/extdata/dayhoff-dcmut.dat usr/lib/R/site-library/phangorn/extdata/jtt-dcmut.dat usr/lib/R/site-library/phangorn/extdata/lg.dat usr/lib/R/site-library/phangorn/extdata/mites.csv usr/lib/R/site-library/phangorn/extdata/mites.nex usr/lib/R/site-library/phangorn/extdata/mtArt.dat usr/lib/R/site-library/phangorn/extdata/mtREV24.dat usr/lib/R/site-library/phangorn/extdata/mtmam.dat usr/lib/R/site-library/phangorn/extdata/trees usr/lib/R/site-library/phangorn/extdata/trees/H3N2_NA_20.csv usr/lib/R/site-library/phangorn/extdata/trees/H3N2_NA_20.fasta usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bestTree.3moles usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bestTree.AIs usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bestTree.Wang.out usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bestTree.YCh usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bestTree.mtG usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitions.3moles usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitions.AIs usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitions.YCh usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitions.mtG usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitions.woodmouse usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitionsBranchLabels.3moles usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitionsBranchLabels.AIs usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitionsBranchLabels.YCh usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bipartitionsBranchLabels.mtG usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bootstrap.3moles usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bootstrap.AIs usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bootstrap.Wang.out usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bootstrap.YCh usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bootstrap.mtG usr/lib/R/site-library/phangorn/extdata/trees/RAxML_bootstrap.woodmouse usr/lib/R/site-library/phangorn/extdata/trees/RAxML_distances.Wang.nxs usr/lib/R/site-library/phangorn/extdata/trees/Splits.txt usr/lib/R/site-library/phangorn/extdata/trees/primates.dna usr/lib/R/site-library/phangorn/extdata/trees/seqfile.txt usr/lib/R/site-library/phangorn/extdata/trees/tree.txt usr/lib/R/site-library/phangorn/extdata/trees/woodmouse.fasta usr/lib/R/site-library/phangorn/extdata/trees/woodmouse.mrbayes.nex.con usr/lib/R/site-library/phangorn/extdata/trees/woodmouse.mrbayes.nex.run1.t usr/lib/R/site-library/phangorn/extdata/trees/woodmouse.mrbayes.nex.run2.t usr/lib/R/site-library/phangorn/extdata/trees/woodmouse.nxs usr/lib/R/site-library/phangorn/extdata/wag.dat usr/lib/R/site-library/phangorn/help usr/lib/R/site-library/phangorn/help/AnIndex usr/lib/R/site-library/phangorn/help/aliases.rds usr/lib/R/site-library/phangorn/help/figures usr/lib/R/site-library/phangorn/help/figures/logo.png usr/lib/R/site-library/phangorn/help/figures/phangorn_sticker.png usr/lib/R/site-library/phangorn/help/paths.rds usr/lib/R/site-library/phangorn/help/phangorn.rdb usr/lib/R/site-library/phangorn/help/phangorn.rdx usr/lib/R/site-library/phangorn/html usr/lib/R/site-library/phangorn/html/00Index.html usr/lib/R/site-library/phangorn/html/R.css usr/lib/R/site-library/phangorn/libs usr/lib/R/site-library/phangorn/libs/phangorn.so usr/lib/R/site-library/phangorn/tinytest usr/lib/R/site-library/phangorn/tinytest/test_Clanistics.R usr/lib/R/site-library/phangorn/tinytest/test_SH.R usr/lib/R/site-library/phangorn/tinytest/test_add_edge_length.R usr/lib/R/site-library/phangorn/tinytest/test_ancestral.R usr/lib/R/site-library/phangorn/tinytest/test_bootstrap.R usr/lib/R/site-library/phangorn/tinytest/test_candidate_tree.R usr/lib/R/site-library/phangorn/tinytest/test_codon.R usr/lib/R/site-library/phangorn/tinytest/test_dist_tree.R usr/lib/R/site-library/phangorn/tinytest/test_distances.R usr/lib/R/site-library/phangorn/tinytest/test_hadamard.R usr/lib/R/site-library/phangorn/tinytest/test_hash.R usr/lib/R/site-library/phangorn/tinytest/test_mast.R usr/lib/R/site-library/phangorn/tinytest/test_modelTest.R usr/lib/R/site-library/phangorn/tinytest/test_parsimony.R usr/lib/R/site-library/phangorn/tinytest/test_phyDat.R usr/lib/R/site-library/phangorn/tinytest/test_pml.R usr/lib/R/site-library/phangorn/tinytest/test_pmlCluster.R usr/lib/R/site-library/phangorn/tinytest/test_pmlMix.R usr/lib/R/site-library/phangorn/tinytest/test_pmlPart.R usr/lib/R/site-library/phangorn/tinytest/test_pmlPen.R usr/lib/R/site-library/phangorn/tinytest/test_pml_generics.R usr/lib/R/site-library/phangorn/tinytest/test_readnexus_multi.R usr/lib/R/site-library/phangorn/tinytest/test_speciesTree.R usr/lib/R/site-library/phangorn/tinytest/test_splits.R usr/lib/R/site-library/phangorn/tinytest/test_superTree.R usr/lib/R/site-library/phangorn/tinytest/test_treeManipulation.R usr/lib/R/site-library/phangorn/tinytest/test_treeRearrangement.R usr/lib/R/site-library/phangorn/tinytest/test_treedist.R usr/share usr/share/doc usr/share/doc/r-cran-phangorn usr/share/doc/r-cran-phangorn/README.md usr/share/doc/r-cran-phangorn/README.test usr/share/doc/r-cran-phangorn/changelog.Debian.gz usr/share/doc/r-cran-phangorn/changelog.gz usr/share/doc/r-cran-phangorn/copyright usr/share/doc/r-cran-phangorn/run-unit-test usr/share/doc/r-cran-phangorn/tests usr/share/doc/r-cran-phangorn/tests/testthat usr/share/doc/r-cran-phangorn/tests/testthat/_snaps usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_ancestral usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_ancestral/pie-plots.svg usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_networx usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_networx/plot-networx.svg usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_pml usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_pml/densitree.svg usr/share/doc/r-cran-phangorn/tests/testthat/_snaps/plot_pml/plot-pml.svg usr/share/doc/r-cran-phangorn/tests/testthat/test_plot_ancestral.R usr/share/doc/r-cran-phangorn/tests/testthat/test_plot_networx.R usr/share/doc/r-cran-phangorn/tests/testthat/test_plot_pml.R usr/share/doc/r-cran-phangorn/tests/testthat.R usr/share/doc/r-cran-phangorn/tests/tinytest.R