rate4site (3.0.0-8)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- none
- Architecture
- s390x
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 5.5 kB
- Size expected
- 566.8 kB
- Size actual
- 566.8 kB
- Size match
Suggested packages
Recommended additional packages
- None
Description
detector of conserved amino-acid sites
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 68e00e3e…fe1dee7c | |
| SHA-1 | 09577fa7…dd128715 | |
| SHA-256 | cda1843a…9440fd12 | |
| SHA-512 | c6f01a16…2fc1cd3a |
Contents
Files and directories included
. usr usr/bin usr/bin/rate4site usr/bin/rate4site_doublerep usr/include usr/include/libphylo usr/include/libphylo/ConversionUtils.h usr/include/libphylo/HIVb.dat.q usr/include/libphylo/HIVw.dat.q usr/include/libphylo/LG.dat.q usr/include/libphylo/aaJC.h usr/include/libphylo/adrianCodon.dat.q usr/include/libphylo/alphabet.h usr/include/libphylo/amino.h usr/include/libphylo/bblEM.h usr/include/libphylo/bblEMProportionalEB.h usr/include/libphylo/bblLSProportionalEB.h usr/include/libphylo/bestAlpha.h usr/include/libphylo/bestGtrModelParams.h usr/include/libphylo/bestHKYparam.h usr/include/libphylo/bestTamura92param.h usr/include/libphylo/chebyshevAccelerator.h usr/include/libphylo/checkcovFanctors.h usr/include/libphylo/checkcovFanctorsWithFactors.h usr/include/libphylo/clustalFormat.h usr/include/libphylo/codon.h usr/include/libphylo/computeCounts.h usr/include/libphylo/computeDownAlg.h usr/include/libphylo/computePijComponent.h usr/include/libphylo/computePosteriorExpectationOfSubstitutions.h usr/include/libphylo/computePosteriorExpectationOfSubstitutions_nonReversibleSp.h usr/include/libphylo/computeSubstitutionCounts.h usr/include/libphylo/computeUpAlg.h usr/include/libphylo/countTableComponent.h usr/include/libphylo/cpREV45.dat usr/include/libphylo/cpREV45.dat.q usr/include/libphylo/datMatrixHolder.h usr/include/libphylo/dayhoff.dat usr/include/libphylo/dayhoff.dat.q usr/include/libphylo/definitions.h usr/include/libphylo/distanceMethod.h usr/include/libphylo/distanceTable.h usr/include/libphylo/distances2Tree.h usr/include/libphylo/distribution.h usr/include/libphylo/doubleRep.h usr/include/libphylo/errorMsg.h usr/include/libphylo/evaluateCharacterFreq.h usr/include/libphylo/fastStartTree.h usr/include/libphylo/fastaFormat.h usr/include/libphylo/fromCountTableComponentToDistance.h usr/include/libphylo/fromCountTableComponentToDistancePropEB.h usr/include/libphylo/fromQtoPt.h usr/include/libphylo/gainLossAlphabet.h usr/include/libphylo/gammaDistribution.h usr/include/libphylo/gammaUtilities.h usr/include/libphylo/generalGammaDistribution.h usr/include/libphylo/geneticCodeHolder.h usr/include/libphylo/getRandomWeights.h usr/include/libphylo/getopt.h usr/include/libphylo/gtrModel.h usr/include/libphylo/hky.h usr/include/libphylo/jcDistance.h usr/include/libphylo/jones.dat usr/include/libphylo/jones.dat.q usr/include/libphylo/likeDist.h usr/include/libphylo/likeDistPropEB.h usr/include/libphylo/likelihoodComputation.h usr/include/libphylo/likelihoodComputationFactors.h usr/include/libphylo/likelihoodComputationGL.h usr/include/libphylo/logFile.h usr/include/libphylo/maseFormat.h usr/include/libphylo/matrixUtils.h usr/include/libphylo/mitochondriaAscidian.code usr/include/libphylo/mitochondriaEchinoderm.code usr/include/libphylo/mitochondriaFlatworm.code usr/include/libphylo/mitochondriaInvertebrate.code usr/include/libphylo/mitochondriaProtozoan.code usr/include/libphylo/mitochondriaVertebrate.code usr/include/libphylo/mitochondriaYeast.code usr/include/libphylo/molphyFormat.h usr/include/libphylo/mtREV24.dat usr/include/libphylo/mtREV24.dat.q usr/include/libphylo/mulAlphabet.h usr/include/libphylo/multipleStochasticProcess.h usr/include/libphylo/nexusFormat.h usr/include/libphylo/nj.h usr/include/libphylo/njConstrain.h usr/include/libphylo/nucJC.h usr/include/libphylo/nuclearBlepharisma.code usr/include/libphylo/nuclearCiliate.code usr/include/libphylo/nuclearEuplotid.code usr/include/libphylo/nuclearStandard.code usr/include/libphylo/nucleotide.h usr/include/libphylo/numRec.h usr/include/libphylo/phylipFormat.h usr/include/libphylo/phylipSequentialFormat.h usr/include/libphylo/pijAccelerator.h usr/include/libphylo/readDatMatrix.h usr/include/libphylo/readTree.h usr/include/libphylo/recognizeFormat.h usr/include/libphylo/replacementModel.h usr/include/libphylo/seqContainerTreeMap.h usr/include/libphylo/sequence.h usr/include/libphylo/sequenceContainer.h usr/include/libphylo/simulateCodonsJumps.h usr/include/libphylo/simulateJumps.h usr/include/libphylo/simulateJumpsAbstract.h usr/include/libphylo/siteSpecificRate.h usr/include/libphylo/someUtil.h usr/include/libphylo/stochasticProcess.h usr/include/libphylo/suffStatComponent.h usr/include/libphylo/talRandom.h usr/include/libphylo/tamura92.h usr/include/libphylo/tree.h usr/include/libphylo/treeIt.h usr/include/libphylo/treeUtil.h usr/include/libphylo/trivialAccelerator.h usr/include/libphylo/unObservableData.h usr/include/libphylo/uniDistribution.h usr/include/libphylo/uniformDistribution.h usr/include/libphylo/wag.dat usr/include/libphylo/wag.dat.q usr/lib usr/lib/s390x-linux-gnu usr/lib/s390x-linux-gnu/libphylo.a usr/share usr/share/doc usr/share/doc/rate4site usr/share/doc/rate4site/README.test usr/share/doc/rate4site/changelog.Debian.gz usr/share/doc/rate4site/changelog.gz usr/share/doc/rate4site/copyright usr/share/doc/rate4site/installation-test usr/share/man usr/share/man/man1 usr/share/man/man1/rate4site.1.gz usr/share/man/man1/rate4site_doublerep.1.gz