simkamin (1.5.3-10)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-sid
- Repository
- https://deb.debian.org/debian
- Codename
- sid
- Component
- main
- Source
- simka
- Architecture
- s390x
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 385 B
- Size expected
- 32.7 kB
- Size actual
- 32.7 kB
- Size match
Suggested packages
Recommended additional packages
- None
Description
approximate comparative metagenomics method dedicated to NGS datasets
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | c74f06ea…aff1df9f | |
| SHA-1 | 2d4eb3a5…cafd3a79 | |
| SHA-256 | dca32475…eed15764 | |
| SHA-512 | afcf4c59…81a766e8 |
Contents
Files and directories included
. usr usr/bin usr/share usr/share/doc usr/share/doc/simkamin usr/share/doc/simkamin/changelog.Debian.gz usr/share/doc/simkamin/copyright usr/share/doc/simkamin/example usr/share/doc/simkamin/example/simkaMin usr/share/doc/simkamin/example/simkaMin/test_simkaMin.py.gz usr/share/doc/simkamin/example/simkaMin/truth_simkaMin usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21__100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k21_filter_100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31__100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin/k31_filter_100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21__100-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_0-100_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n1 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n1/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-1000_n1/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-100_n0 usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-100_n0/mat_abundance_braycurtis.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-100_n0/mat_presenceAbsence_jaccard.csv usr/share/doc/simkamin/example/simkaMin/truth_simkaMin_symetrical/k21_filter_100-100_n1 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