r-bioc-genomicranges (1.58.0+dfsg-2)
Details
Core information at a glance
- Distribution
- debian
- Origin
- debian-trixie
- Repository
- https://deb.debian.org/debian
- Codename
- trixie
- Component
- main
- Source
- r-bioc-genomicranges
- Architecture
- ppc64el
- Section
- gnu-r
- Priority
- optional
- Maintainer
- Debian R Packages Maintainers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3 MB
- Size expected
- 2.1 MB
- Size actual
- 2.1 MB
- Size match
- match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-bioc-biocgenerics (>= 0.37.0)
- r-bioc-s4vectors (>= 0.27.12)
- r-bioc-iranges (>= 2.37.1)
- r-bioc-genomeinfodb (>= 1.15.2)
- r-bioc-xvector (>= 0.29.2)
- libc6 (>= 2.17)
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
- r-cran-matrix
- r-bioc-biobase
- r-bioc-annotationdbi
- r-bioc-annotate
- r-bioc-biostrings (>= 2.25.3)
- r-bioc-summarizedexperiment (>= 0.1.5)
- r-bioc-rsamtools (>= 1.13.53)
- r-bioc-genomicalignments
- r-bioc-rtracklayer
- r-bioc-bsgenome
- r-bioc-genomicfeatures
- r-bioc-txdbmaker
- r-bioc-gviz
- r-bioc-variantannotation
- r-bioc-annotationhub
- r-bioc-deseq2
- r-bioc-dexseq
- r-bioc-edger
- r-bioc-keggrest
- r-cran-runit
- r-cran-digest
- r-cran-knitr
- r-cran-rmarkdown
- r-bioc-biocstyle
Provides
Virtual packages provided
- None
Description
BioConductor representation and manipulation of genomic intervals
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | e68b3d4a…1cea9275 | match |
| SHA-1 | 4460c352…c36a0fba | not available |
| SHA-256 | 86e382b5…93b25107 | match |
| SHA-512 | 8922a09b…8b5b0fb6 | not available |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/GenomicRanges usr/lib/R/site-library/GenomicRanges/CITATION usr/lib/R/site-library/GenomicRanges/DESCRIPTION usr/lib/R/site-library/GenomicRanges/INDEX usr/lib/R/site-library/GenomicRanges/Meta usr/lib/R/site-library/GenomicRanges/Meta/Rd.rds usr/lib/R/site-library/GenomicRanges/Meta/features.rds usr/lib/R/site-library/GenomicRanges/Meta/hsearch.rds usr/lib/R/site-library/GenomicRanges/Meta/links.rds usr/lib/R/site-library/GenomicRanges/Meta/nsInfo.rds usr/lib/R/site-library/GenomicRanges/Meta/package.rds usr/lib/R/site-library/GenomicRanges/Meta/vignette.rds usr/lib/R/site-library/GenomicRanges/NAMESPACE usr/lib/R/site-library/GenomicRanges/NEWS usr/lib/R/site-library/GenomicRanges/R usr/lib/R/site-library/GenomicRanges/R/GenomicRanges usr/lib/R/site-library/GenomicRanges/R/GenomicRanges.rdb usr/lib/R/site-library/GenomicRanges/R/GenomicRanges.rdx usr/lib/R/site-library/GenomicRanges/doc usr/lib/R/site-library/GenomicRanges/doc/ExtendingGenomicRanges.R usr/lib/R/site-library/GenomicRanges/doc/ExtendingGenomicRanges.Rnw usr/lib/R/site-library/GenomicRanges/doc/ExtendingGenomicRanges.pdf usr/lib/R/site-library/GenomicRanges/doc/GRanges_and_GRangesList_slides.R usr/lib/R/site-library/GenomicRanges/doc/GRanges_and_GRangesList_slides.Rnw usr/lib/R/site-library/GenomicRanges/doc/GRanges_and_GRangesList_slides.pdf usr/lib/R/site-library/GenomicRanges/doc/GenomicRangesHOWTOs.R usr/lib/R/site-library/GenomicRanges/doc/GenomicRangesHOWTOs.Rnw usr/lib/R/site-library/GenomicRanges/doc/GenomicRangesHOWTOs.pdf usr/lib/R/site-library/GenomicRanges/doc/GenomicRangesIntroduction.R usr/lib/R/site-library/GenomicRanges/doc/GenomicRangesIntroduction.Rmd usr/lib/R/site-library/GenomicRanges/doc/Ten_things_slides.R usr/lib/R/site-library/GenomicRanges/doc/Ten_things_slides.Rnw usr/lib/R/site-library/GenomicRanges/doc/Ten_things_slides.pdf usr/lib/R/site-library/GenomicRanges/doc/index.html usr/lib/R/site-library/GenomicRanges/extdata usr/lib/R/site-library/GenomicRanges/extdata/feature_frags.txt usr/lib/R/site-library/GenomicRanges/help usr/lib/R/site-library/GenomicRanges/help/AnIndex usr/lib/R/site-library/GenomicRanges/help/GenomicRanges.rdb usr/lib/R/site-library/GenomicRanges/help/GenomicRanges.rdx usr/lib/R/site-library/GenomicRanges/help/aliases.rds usr/lib/R/site-library/GenomicRanges/help/paths.rds usr/lib/R/site-library/GenomicRanges/html usr/lib/R/site-library/GenomicRanges/html/00Index.html usr/lib/R/site-library/GenomicRanges/html/R.css usr/lib/R/site-library/GenomicRanges/libs usr/lib/R/site-library/GenomicRanges/libs/GenomicRanges.so usr/lib/R/site-library/GenomicRanges/scripts usr/lib/R/site-library/GenomicRanges/scripts/timing_overlaps.R usr/lib/R/site-library/GenomicRanges/unitTests usr/lib/R/site-library/GenomicRanges/unitTests/test_GNCList-class.R usr/lib/R/site-library/GenomicRanges/unitTests/test_GRanges-class.R usr/lib/R/site-library/GenomicRanges/unitTests/test_GRangesList-class.R usr/lib/R/site-library/GenomicRanges/unitTests/test_GenomicRanges-comparison.R usr/lib/R/site-library/GenomicRanges/unitTests/test_coverage-methods.R usr/lib/R/site-library/GenomicRanges/unitTests/test_findOverlaps-methods.R usr/lib/R/site-library/GenomicRanges/unitTests/test_inter-range-methods.R usr/lib/R/site-library/GenomicRanges/unitTests/test_intra-range-methods.R usr/lib/R/site-library/GenomicRanges/unitTests/test_makeGRangesFromDataFrame.R usr/lib/R/site-library/GenomicRanges/unitTests/test_makeGRangesListFromDataFrame.R usr/lib/R/site-library/GenomicRanges/unitTests/test_nearest-methods.R usr/lib/R/site-library/GenomicRanges/unitTests/test_precede_follow.R usr/lib/R/site-library/GenomicRanges/unitTests/test_setops-methods.R usr/share usr/share/doc usr/share/doc/r-bioc-genomicranges usr/share/doc/r-bioc-genomicranges/changelog.Debian.gz usr/share/doc/r-bioc-genomicranges/copyright