fastaq (3.17.0-9)
Details
Core information at a glance
- Distribution
- kali
- Origin
- kali-last-snapshot
- Repository
- https://http.kali.org/kali
- Codename
- kali-last-snapshot
- Component
- main
- Source
- none
- Architecture
- amd64
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 195 B
- Size expected
- 47.8 kB
- Size actual
- 47.8 kB
- Size match
Suggested packages
Recommended additional packages
- None
Description
FASTA and FASTQ file manipulation tools
Tags
Package classification tags
biology::format:fasta
biology::nucleic-acids
field::biology
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | b4137071…ad386b8b | |
| SHA-1 | 8d766e59…9a3a9eb4 | |
| SHA-256 | 2cf650da…799d2c31 | |
| SHA-512 | c7e09164…89552258 |
Contents
Files and directories included
. usr usr/bin usr/bin/fastaq usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/pyfastaq usr/lib/python3/dist-packages/pyfastaq/__init__.py usr/lib/python3/dist-packages/pyfastaq/caf.py usr/lib/python3/dist-packages/pyfastaq/genetic_codes.py usr/lib/python3/dist-packages/pyfastaq/intervals.py usr/lib/python3/dist-packages/pyfastaq/runners usr/lib/python3/dist-packages/pyfastaq/runners/__init__.py usr/lib/python3/dist-packages/pyfastaq/runners/acgtn_only.py usr/lib/python3/dist-packages/pyfastaq/runners/add_indels.py usr/lib/python3/dist-packages/pyfastaq/runners/caf_to_fastq.py usr/lib/python3/dist-packages/pyfastaq/runners/capillary_to_pairs.py usr/lib/python3/dist-packages/pyfastaq/runners/chunker.py usr/lib/python3/dist-packages/pyfastaq/runners/count_sequences.py usr/lib/python3/dist-packages/pyfastaq/runners/deinterleave.py usr/lib/python3/dist-packages/pyfastaq/runners/enumerate_names.py usr/lib/python3/dist-packages/pyfastaq/runners/expand_nucleotides.py usr/lib/python3/dist-packages/pyfastaq/runners/fasta_to_fastq.py usr/lib/python3/dist-packages/pyfastaq/runners/filter.py usr/lib/python3/dist-packages/pyfastaq/runners/get_ids.py usr/lib/python3/dist-packages/pyfastaq/runners/get_seq_flanking_gaps.py usr/lib/python3/dist-packages/pyfastaq/runners/interleave.py usr/lib/python3/dist-packages/pyfastaq/runners/make_random_contigs.py usr/lib/python3/dist-packages/pyfastaq/runners/merge.py usr/lib/python3/dist-packages/pyfastaq/runners/replace_bases.py usr/lib/python3/dist-packages/pyfastaq/runners/reverse_complement.py usr/lib/python3/dist-packages/pyfastaq/runners/scaffolds_to_contigs.py usr/lib/python3/dist-packages/pyfastaq/runners/search_for_seq.py usr/lib/python3/dist-packages/pyfastaq/runners/sequence_trim.py usr/lib/python3/dist-packages/pyfastaq/runners/sort_by_name.py usr/lib/python3/dist-packages/pyfastaq/runners/sort_by_size.py usr/lib/python3/dist-packages/pyfastaq/runners/split_by_base_count.py usr/lib/python3/dist-packages/pyfastaq/runners/strip_illumina_suffix.py usr/lib/python3/dist-packages/pyfastaq/runners/to_boulderio.py usr/lib/python3/dist-packages/pyfastaq/runners/to_fake_qual.py usr/lib/python3/dist-packages/pyfastaq/runners/to_fasta.py usr/lib/python3/dist-packages/pyfastaq/runners/to_mira_xml.py usr/lib/python3/dist-packages/pyfastaq/runners/to_orfs_gff.py usr/lib/python3/dist-packages/pyfastaq/runners/to_perfect_reads.py usr/lib/python3/dist-packages/pyfastaq/runners/to_random_subset.py usr/lib/python3/dist-packages/pyfastaq/runners/to_tiling_bam.py usr/lib/python3/dist-packages/pyfastaq/runners/to_unique_by_id.py usr/lib/python3/dist-packages/pyfastaq/runners/translate.py usr/lib/python3/dist-packages/pyfastaq/runners/trim_Ns_at_end.py usr/lib/python3/dist-packages/pyfastaq/runners/trim_contigs.py usr/lib/python3/dist-packages/pyfastaq/runners/trim_ends.py usr/lib/python3/dist-packages/pyfastaq/runners/version.py usr/lib/python3/dist-packages/pyfastaq/sequences.py usr/lib/python3/dist-packages/pyfastaq/tasks.py usr/lib/python3/dist-packages/pyfastaq/utils.py usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/PKG-INFO usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/dependency_links.txt usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/fastaq usr/share/doc/fastaq/changelog.Debian.gz usr/share/doc/fastaq/copyright usr/share/man usr/share/man/man1 usr/share/man/man1/fastaq-acgtn_only.1.gz usr/share/man/man1/fastaq-add_indels.1.gz usr/share/man/man1/fastaq-caf_to_fastq.1.gz usr/share/man/man1/fastaq-capillary_to_pairs.1.gz usr/share/man/man1/fastaq-chunker.1.gz usr/share/man/man1/fastaq-count_sequences.1.gz usr/share/man/man1/fastaq-deinterleave.1.gz usr/share/man/man1/fastaq-enumerate_names.1.gz usr/share/man/man1/fastaq-expand_nucleotides.1.gz usr/share/man/man1/fastaq-fasta_to_fastq.1.gz usr/share/man/man1/fastaq-filter.1.gz usr/share/man/man1/fastaq-get_ids.1.gz usr/share/man/man1/fastaq-get_seq_flanking_gaps.1.gz usr/share/man/man1/fastaq-interleave.1.gz usr/share/man/man1/fastaq-make_random_contigs.1.gz usr/share/man/man1/fastaq-merge.1.gz usr/share/man/man1/fastaq-replace_bases.1.gz usr/share/man/man1/fastaq-reverse_complement.1.gz usr/share/man/man1/fastaq-scaffolds_to_contigs.1.gz usr/share/man/man1/fastaq-search_for_seq.1.gz usr/share/man/man1/fastaq-sequence_trim.1.gz usr/share/man/man1/fastaq-sort_by_name.1.gz usr/share/man/man1/fastaq-sort_by_size.1.gz usr/share/man/man1/fastaq-split_by_base_count.1.gz usr/share/man/man1/fastaq-strip_illumina_suffix.1.gz usr/share/man/man1/fastaq-to_boulderio.1.gz usr/share/man/man1/fastaq-to_fake_qual.1.gz usr/share/man/man1/fastaq-to_fasta.1.gz usr/share/man/man1/fastaq-to_mira_xml.1.gz usr/share/man/man1/fastaq-to_orfs_gff.1.gz usr/share/man/man1/fastaq-to_perfect_reads.1.gz usr/share/man/man1/fastaq-to_random_subset.1.gz usr/share/man/man1/fastaq-to_tiling_bam.1.gz usr/share/man/man1/fastaq-to_unique_by_id.1.gz usr/share/man/man1/fastaq-translate.1.gz usr/share/man/man1/fastaq-trim_Ns_at_end.1.gz usr/share/man/man1/fastaq-trim_contigs.1.gz usr/share/man/man1/fastaq-trim_ends.1.gz usr/share/man/man1/fastaq-version.1.gz usr/share/man/man1/fastaq.1.gz