libbpp-phyl-dev (2.4.1-13)
2 versions available in kali/kali-last-snapshot/main/i386
Details
Core information at a glance
- Distribution
- kali
- Origin
- kali-last-snapshot
- Repository
- https://http.kali.org/kali
- Codename
- kali-last-snapshot
- Component
- main
- Source
- libbpp-phyl
- Architecture
- i386
- Section
- libdevel
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 28.9 kB
- Size expected
- 3.1 MB
- Size actual
- 3.1 MB
- Size match
Suggested packages
Recommended additional packages
- None
Description
Bio++ Phylogenetic library development files
Tags
Package classification tags
devel::library
role::devel-lib
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 31fe29fe…6155bb76 | |
| SHA-1 | 106e227e…7d5f7822 | |
| SHA-256 | c855d3b6…825bda14 | |
| SHA-512 | e9937deb…6723df16 |
Contents
Files and directories included
. usr usr/include usr/include/Bpp usr/include/Bpp/Phyl usr/include/Bpp/Phyl/AncestralStateReconstruction.h usr/include/Bpp/Phyl/App usr/include/Bpp/Phyl/App/PhylogeneticsApplicationTools.h usr/include/Bpp/Phyl/BipartitionList.h usr/include/Bpp/Phyl/BipartitionTools.h usr/include/Bpp/Phyl/Distance usr/include/Bpp/Phyl/Distance/AbstractAgglomerativeDistanceMethod.h usr/include/Bpp/Phyl/Distance/BioNJ.h usr/include/Bpp/Phyl/Distance/DistanceEstimation.h usr/include/Bpp/Phyl/Distance/DistanceMethod.h usr/include/Bpp/Phyl/Distance/HierarchicalClustering.h usr/include/Bpp/Phyl/Distance/NeighborJoining.h usr/include/Bpp/Phyl/Distance/PGMA.h usr/include/Bpp/Phyl/Graphics usr/include/Bpp/Phyl/Graphics/AbstractDendrogramPlot.h usr/include/Bpp/Phyl/Graphics/AbstractTreeDrawing.h usr/include/Bpp/Phyl/Graphics/CladogramPlot.h usr/include/Bpp/Phyl/Graphics/PhylogramPlot.h usr/include/Bpp/Phyl/Graphics/TreeDrawing.h usr/include/Bpp/Phyl/Graphics/TreeDrawingDisplayControler.h usr/include/Bpp/Phyl/Graphics/TreeDrawingListener.h usr/include/Bpp/Phyl/Io usr/include/Bpp/Phyl/Io/BppOFrequenciesSetFormat.h usr/include/Bpp/Phyl/Io/BppOMultiTreeReaderFormat.h usr/include/Bpp/Phyl/Io/BppOMultiTreeWriterFormat.h usr/include/Bpp/Phyl/Io/BppORateDistributionFormat.h usr/include/Bpp/Phyl/Io/BppOSubstitutionModelFormat.h usr/include/Bpp/Phyl/Io/BppOTransitionModelFormat.h usr/include/Bpp/Phyl/Io/BppOTreeReaderFormat.h usr/include/Bpp/Phyl/Io/BppOTreeWriterFormat.h usr/include/Bpp/Phyl/Io/IoDistanceMatrix.h usr/include/Bpp/Phyl/Io/IoDistanceMatrixFactory.h usr/include/Bpp/Phyl/Io/IoFrequenciesSet.h usr/include/Bpp/Phyl/Io/IoFrequenciesSetFactory.h usr/include/Bpp/Phyl/Io/IoPairedSiteLikelihoods.h usr/include/Bpp/Phyl/Io/IoSubstitutionModel.h usr/include/Bpp/Phyl/Io/IoSubstitutionModelFactory.h usr/include/Bpp/Phyl/Io/IoTree.h usr/include/Bpp/Phyl/Io/IoTreeFactory.h usr/include/Bpp/Phyl/Io/Newick.h usr/include/Bpp/Phyl/Io/NexusIoTree.h usr/include/Bpp/Phyl/Io/Nhx.h usr/include/Bpp/Phyl/Io/PhylipDistanceMatrixFormat.h usr/include/Bpp/Phyl/Likelihood usr/include/Bpp/Phyl/Likelihood/AbstractDiscreteRatesAcrossSitesTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/AbstractHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/AbstractNonHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/AbstractTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/AbstractTreeLikelihoodData.h usr/include/Bpp/Phyl/Likelihood/ClockTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/DRASDRTreeLikelihoodData.h usr/include/Bpp/Phyl/Likelihood/DRASRTreeLikelihoodData.h usr/include/Bpp/Phyl/Likelihood/DRHomogeneousMixedTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/DRHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/DRNonHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/DRTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/DRTreeLikelihoodTools.h usr/include/Bpp/Phyl/Likelihood/DiscreteRatesAcrossSitesTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/GlobalClockTreeLikelihoodFunctionWrapper.h usr/include/Bpp/Phyl/Likelihood/HomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/MarginalAncestralStateReconstruction.h usr/include/Bpp/Phyl/Likelihood/NNIHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/NonHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/PairedSiteLikelihoods.h usr/include/Bpp/Phyl/Likelihood/PseudoNewtonOptimizer.h usr/include/Bpp/Phyl/Likelihood/RASTools.h usr/include/Bpp/Phyl/Likelihood/RHomogeneousClockTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/RHomogeneousMixedTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/RHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/RNonHomogeneousMixedTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/RNonHomogeneousTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/SitePartitionTreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/TreeLikelihood.h usr/include/Bpp/Phyl/Likelihood/TreeLikelihoodData.h usr/include/Bpp/Phyl/Likelihood/TreeLikelihoodTools.h usr/include/Bpp/Phyl/Mapping usr/include/Bpp/Phyl/Mapping/CategorySubstitutionRegister.h usr/include/Bpp/Phyl/Mapping/DecompositionMethods.h usr/include/Bpp/Phyl/Mapping/DecompositionReward.h usr/include/Bpp/Phyl/Mapping/DecompositionSubstitutionCount.h usr/include/Bpp/Phyl/Mapping/LaplaceSubstitutionCount.h usr/include/Bpp/Phyl/Mapping/Mapping.h usr/include/Bpp/Phyl/Mapping/NaiveSubstitutionCount.h usr/include/Bpp/Phyl/Mapping/OneJumpSubstitutionCount.h usr/include/Bpp/Phyl/Mapping/ProbabilisticRewardMapping.h usr/include/Bpp/Phyl/Mapping/ProbabilisticSubstitutionMapping.h usr/include/Bpp/Phyl/Mapping/Reward.h usr/include/Bpp/Phyl/Mapping/RewardMapping.h usr/include/Bpp/Phyl/Mapping/RewardMappingTools.h usr/include/Bpp/Phyl/Mapping/SubstitutionCount.h usr/include/Bpp/Phyl/Mapping/SubstitutionMapping.h usr/include/Bpp/Phyl/Mapping/SubstitutionMappingTools.h usr/include/Bpp/Phyl/Mapping/SubstitutionRegister.h usr/include/Bpp/Phyl/Mapping/UniformizationSubstitutionCount.h usr/include/Bpp/Phyl/Mapping/WeightedSubstitutionCount.h usr/include/Bpp/Phyl/Model usr/include/Bpp/Phyl/Model/AbstractBiblioMixedSubstitutionModel.h usr/include/Bpp/Phyl/Model/AbstractBiblioSubstitutionModel.h usr/include/Bpp/Phyl/Model/AbstractFromSubstitutionModelTransitionModel.h usr/include/Bpp/Phyl/Model/AbstractKroneckerWordSubstitutionModel.h usr/include/Bpp/Phyl/Model/AbstractMixedSubstitutionModel.h usr/include/Bpp/Phyl/Model/AbstractSubstitutionModel.h usr/include/Bpp/Phyl/Model/AbstractWordSubstitutionModel.h usr/include/Bpp/Phyl/Model/AbstractWrappedModel.h usr/include/Bpp/Phyl/Model/AnonymousSubstitutionModel.h usr/include/Bpp/Phyl/Model/BinarySubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon usr/include/Bpp/Phyl/Model/Codon/AbstractCodonAAFitnessSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonAARateSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonBGCSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonCpGSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonDistanceSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonFitnessSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonFrequenciesSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonPhaseFrequenciesSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractCodonSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/AbstractKroneckerCodonSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/CodonAdHocSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/CodonDistanceFrequenciesSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/CodonDistancePhaseFrequenciesSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/CodonDistanceSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/CodonSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/GY94.h usr/include/Bpp/Phyl/Model/Codon/KCM.h usr/include/Bpp/Phyl/Model/Codon/KroneckerCodonDistanceFrequenciesSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/KroneckerCodonDistanceSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/MG94.h usr/include/Bpp/Phyl/Model/Codon/SENCA.h usr/include/Bpp/Phyl/Model/Codon/TripletSubstitutionModel.h usr/include/Bpp/Phyl/Model/Codon/YN98.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M1.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M10.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M2.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M3.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M7.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M8.h usr/include/Bpp/Phyl/Model/Codon/YNGP_M9.h usr/include/Bpp/Phyl/Model/FrequenciesSet usr/include/Bpp/Phyl/Model/FrequenciesSet/CodonFrequenciesSet.h usr/include/Bpp/Phyl/Model/FrequenciesSet/FrequenciesSet.h usr/include/Bpp/Phyl/Model/FrequenciesSet/MvaFrequenciesSet.h usr/include/Bpp/Phyl/Model/FrequenciesSet/NucleotideFrequenciesSet.h usr/include/Bpp/Phyl/Model/FrequenciesSet/ProteinFrequenciesSet.h usr/include/Bpp/Phyl/Model/FrequenciesSet/WordFrequenciesSet.h usr/include/Bpp/Phyl/Model/FromMixtureSubstitutionModel.h usr/include/Bpp/Phyl/Model/G2001.h usr/include/Bpp/Phyl/Model/InMixedSubstitutionModel.h usr/include/Bpp/Phyl/Model/KroneckerWordSubstitutionModel.h usr/include/Bpp/Phyl/Model/MarkovModulatedSubstitutionModel.h usr/include/Bpp/Phyl/Model/MixedSubstitutionModel.h usr/include/Bpp/Phyl/Model/MixedSubstitutionModelSet.h usr/include/Bpp/Phyl/Model/MixtureOfASubstitutionModel.h usr/include/Bpp/Phyl/Model/MixtureOfSubstitutionModels.h usr/include/Bpp/Phyl/Model/Nucleotide usr/include/Bpp/Phyl/Model/Nucleotide/F84.h usr/include/Bpp/Phyl/Model/Nucleotide/GTR.h usr/include/Bpp/Phyl/Model/Nucleotide/HKY85.h usr/include/Bpp/Phyl/Model/Nucleotide/JCnuc.h usr/include/Bpp/Phyl/Model/Nucleotide/K80.h usr/include/Bpp/Phyl/Model/Nucleotide/L95.h usr/include/Bpp/Phyl/Model/Nucleotide/NucleotideSubstitutionModel.h usr/include/Bpp/Phyl/Model/Nucleotide/RN95.h usr/include/Bpp/Phyl/Model/Nucleotide/RN95s.h usr/include/Bpp/Phyl/Model/Nucleotide/SSR.h usr/include/Bpp/Phyl/Model/Nucleotide/T92.h usr/include/Bpp/Phyl/Model/Nucleotide/TN93.h usr/include/Bpp/Phyl/Model/Nucleotide/YpR.h usr/include/Bpp/Phyl/Model/Nucleotide/gBGC.h usr/include/Bpp/Phyl/Model/OneChangeRegisterTransitionModel.h usr/include/Bpp/Phyl/Model/OneChangeTransitionModel.h usr/include/Bpp/Phyl/Model/Protein usr/include/Bpp/Phyl/Model/Protein/Coala.h usr/include/Bpp/Phyl/Model/Protein/CoalaCore.h usr/include/Bpp/Phyl/Model/Protein/DSO78.h usr/include/Bpp/Phyl/Model/Protein/JCprot.h usr/include/Bpp/Phyl/Model/Protein/JTT92.h usr/include/Bpp/Phyl/Model/Protein/LG08.h usr/include/Bpp/Phyl/Model/Protein/LG10_EX_EHO.h usr/include/Bpp/Phyl/Model/Protein/LGL08_CAT.h usr/include/Bpp/Phyl/Model/Protein/LLG08_EHO.h usr/include/Bpp/Phyl/Model/Protein/LLG08_EX2.h usr/include/Bpp/Phyl/Model/Protein/LLG08_EX3.h usr/include/Bpp/Phyl/Model/Protein/LLG08_UL2.h usr/include/Bpp/Phyl/Model/Protein/LLG08_UL3.h usr/include/Bpp/Phyl/Model/Protein/ProteinSubstitutionModel.h usr/include/Bpp/Phyl/Model/Protein/UserProteinSubstitutionModel.h usr/include/Bpp/Phyl/Model/Protein/WAG01.h usr/include/Bpp/Phyl/Model/RE08.h usr/include/Bpp/Phyl/Model/RateDistribution usr/include/Bpp/Phyl/Model/RateDistribution/ConstantRateDistribution.h usr/include/Bpp/Phyl/Model/RateDistribution/ExponentialDiscreteRateDistribution.h usr/include/Bpp/Phyl/Model/RateDistribution/GammaDiscreteRateDistribution.h usr/include/Bpp/Phyl/Model/RateDistribution/GaussianDiscreteRateDistribution.h usr/include/Bpp/Phyl/Model/RegisterRatesSubstitutionModel.h usr/include/Bpp/Phyl/Model/StateMap.h usr/include/Bpp/Phyl/Model/SubstitutionModel.h usr/include/Bpp/Phyl/Model/SubstitutionModelSet.h usr/include/Bpp/Phyl/Model/SubstitutionModelSetTools.h usr/include/Bpp/Phyl/Model/TS98.h usr/include/Bpp/Phyl/Model/WordSubstitutionModel.h usr/include/Bpp/Phyl/Model/WrappedModel.h usr/include/Bpp/Phyl/NNISearchable.h usr/include/Bpp/Phyl/NNITopologySearch.h usr/include/Bpp/Phyl/Node.h usr/include/Bpp/Phyl/NodeTemplate.h usr/include/Bpp/Phyl/OptimizationTools.h usr/include/Bpp/Phyl/Parsimony usr/include/Bpp/Phyl/Parsimony/AbstractTreeParsimonyData.h usr/include/Bpp/Phyl/Parsimony/AbstractTreeParsimonyScore.h usr/include/Bpp/Phyl/Parsimony/DRTreeParsimonyData.h usr/include/Bpp/Phyl/Parsimony/DRTreeParsimonyScore.h usr/include/Bpp/Phyl/Parsimony/TreeParsimonyData.h usr/include/Bpp/Phyl/Parsimony/TreeParsimonyScore.h usr/include/Bpp/Phyl/PatternTools.h usr/include/Bpp/Phyl/PhyloStatistics.h usr/include/Bpp/Phyl/Simulation usr/include/Bpp/Phyl/Simulation/DetailedSiteSimulator.h usr/include/Bpp/Phyl/Simulation/HomogeneousSequenceSimulator.h usr/include/Bpp/Phyl/Simulation/MutationProcess.h usr/include/Bpp/Phyl/Simulation/NonHomogeneousSequenceSimulator.h usr/include/Bpp/Phyl/Simulation/SequenceSimulationTools.h usr/include/Bpp/Phyl/Simulation/SequenceSimulator.h usr/include/Bpp/Phyl/Simulation/SiteSimulator.h usr/include/Bpp/Phyl/SitePatterns.h usr/include/Bpp/Phyl/TopologySearch.h usr/include/Bpp/Phyl/Tree.h usr/include/Bpp/Phyl/TreeExceptions.h usr/include/Bpp/Phyl/TreeTemplate.h usr/include/Bpp/Phyl/TreeTemplateTools.h usr/include/Bpp/Phyl/TreeTools.h usr/lib usr/lib/i386-linux-gnu usr/lib/i386-linux-gnu/cmake usr/lib/i386-linux-gnu/cmake/bpp-phyl usr/lib/i386-linux-gnu/cmake/bpp-phyl/bpp-phyl-config-version.cmake usr/lib/i386-linux-gnu/cmake/bpp-phyl/bpp-phyl-config.cmake usr/lib/i386-linux-gnu/cmake/bpp-phyl/bpp-phyl-targets-none.cmake usr/lib/i386-linux-gnu/cmake/bpp-phyl/bpp-phyl-targets.cmake usr/lib/i386-linux-gnu/libbpp-phyl.a usr/share usr/share/doc usr/share/doc/libbpp-phyl-dev usr/share/doc/libbpp-phyl-dev/changelog.Debian.gz usr/share/doc/libbpp-phyl-dev/changelog.gz usr/share/doc/libbpp-phyl-dev/copyright usr/lib/i386-linux-gnu/libbpp-phyl.so