macs (3.0.2-3)

2 versions available in kali/kali-last-snapshot/main/i386

Details

Core information at a glance

Distribution
kali
Origin
kali-last-snapshot
Repository
https://http.kali.org/kali
Codename
kali-last-snapshot
Component
main
Source
none
Architecture
i386
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
16.1 kB
Size expected
4 MB
Size actual
4 MB
Size match

Dependencies

Required package dependencies

  • python3-numpy2-abi0 | python3-numpy-abi9
  • python3 (<< 3.15)
  • python3 (>= 3.13~)
  • python3-cykhash
  • python3-hmmlearn
  • python3-numpy
  • python3-scipy
  • python3-sklearn
  • python3:any
  • libc6 (>= 2.38)
  • zlib1g (>= 1:1.1.4)

Suggested packages

Recommended additional packages

  • None

Description

Model-based Analysis of ChIP-Seq on short reads sequencers

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD588bc8f4f…cc58f9d2
SHA-183ccf28a…751b0f33
SHA-25672089adf…08e1c863
SHA-51278b1effc…978c1544

Contents

Files and directories included

.
usr
usr/bin
usr/bin/macs3
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/MACS3
usr/lib/python3/dist-packages/MACS3/Commands
usr/lib/python3/dist-packages/MACS3/Commands/__init__.py
usr/lib/python3/dist-packages/MACS3/Commands/bdgbroadcall_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/bdgcmp_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/bdgdiff_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/bdgopt_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/bdgpeakcall_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/callpeak_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/callvar_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/cmbreps_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/diffpeak_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/filterdup_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/hmmratac_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/pileup_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/predictd_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/randsample_cmd.py
usr/lib/python3/dist-packages/MACS3/Commands/refinepeak_cmd.py
usr/lib/python3/dist-packages/MACS3/IO
usr/lib/python3/dist-packages/MACS3/IO/BAM.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/BAM.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/BedGraphIO.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/BedGraphIO.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/OutputWriter.py
usr/lib/python3/dist-packages/MACS3/IO/Parser.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/Parser.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/PeakIO.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/PeakIO.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/IO/__init__.py
usr/lib/python3/dist-packages/MACS3/Signal
usr/lib/python3/dist-packages/MACS3/Signal/BedGraph.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/BedGraph.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/CallPeakUnit.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/CallPeakUnit.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/FixWidthTrack.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/FixWidthTrack.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/HMMR_EM.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/HMMR_EM.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/HMMR_HMM.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/HMMR_HMM.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/HMMR_Signal_Processing.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/HMMR_Signal_Processing.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PairedEndTrack.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PairedEndTrack.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PeakDetect.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PeakDetect.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PeakModel.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PeakModel.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PeakVariants.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PeakVariants.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/Pileup.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/Pileup.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PileupV2.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PileupV2.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PosReadsInfo.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/PosReadsInfo.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/Prob.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/Prob.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/RACollection.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/RACollection.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/ReadAlignment.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/ReadAlignment.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/Region.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/Region.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/ScoreTrack.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/ScoreTrack.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/SignalProcessing.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/SignalProcessing.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/UnitigRACollection.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/UnitigRACollection.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/VariantStat.cpython-313-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/VariantStat.cpython-314-i386-linux-gnu.so
usr/lib/python3/dist-packages/MACS3/Signal/__init__.py
usr/lib/python3/dist-packages/MACS3/Utilities
usr/lib/python3/dist-packages/MACS3/Utilities/Constants.py
usr/lib/python3/dist-packages/MACS3/Utilities/Logger.py
usr/lib/python3/dist-packages/MACS3/Utilities/OptValidator.py
usr/lib/python3/dist-packages/MACS3/Utilities/__init__.py
usr/lib/python3/dist-packages/MACS3/__init__.py
usr/lib/python3/dist-packages/macs3-3.0.2.dist-info
usr/lib/python3/dist-packages/macs3-3.0.2.dist-info/INSTALLER
usr/lib/python3/dist-packages/macs3-3.0.2.dist-info/METADATA
usr/lib/python3/dist-packages/macs3-3.0.2.dist-info/WHEEL
usr/lib/python3/dist-packages/macs3-3.0.2.dist-info/top_level.txt
usr/share
usr/share/doc
usr/share/doc/macs
usr/share/doc/macs/README.md
usr/share/doc/macs/README.test
usr/share/doc/macs/changelog.Debian.gz
usr/share/doc/macs/changelog.gz
usr/share/doc/macs/copyright
usr/share/doc/macs/examples
usr/share/doc/macs/examples/aluY.chr1.bed.gz
usr/share/doc/macs/examples/gerp.chr1.bed.gz
usr/share/doc/macs/run-unit-test
usr/share/man
usr/share/man/man1
usr/share/man/man1/macs3.1.gz
usr/share/man/man1/macs3_bdgbroadcall.1.gz
usr/share/man/man1/macs3_bdgcmp.1.gz
usr/share/man/man1/macs3_bdgdiff.1.gz
usr/share/man/man1/macs3_bdgopt.1.gz
usr/share/man/man1/macs3_bdgpeakcall.1.gz
usr/share/man/man1/macs3_callpeak.1.gz
usr/share/man/man1/macs3_cmbreps.1.gz
usr/share/man/man1/macs3_filterdup.1.gz
usr/share/man/man1/macs3_pileup.1.gz
usr/share/man/man1/macs3_predictd.1.gz
usr/share/man/man1/macs3_randsample.1.gz
usr/share/man/man1/macs3_refinepeak.1.gz