med-bio-dev (3.9.0)

Details

Core information at a glance

Distribution
kali
Origin
kali-last-snapshot
Repository
https://http.kali.org/kali
Codename
kali-last-snapshot
Component
main
Source
debian-med
Architecture
i386
Section
metapackages
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
33 B
Size expected
11.7 kB
Size actual
11.7 kB
Size match

Dependencies

Required package dependencies

  • med-config (= 3.9.0)
  • med-tasks (= 3.9.0)

Suggested packages

Recommended additional packages

  • bioclipse
  • capsule-nextflow
  • conda-package-handling
  • ctdconverter
  • cthreadpool-dev
  • cwlformat
  • cwltest
  • libargs-dev
  • libatomicqueue-dev
  • libbam-dev
  • libbbhash-dev
  • libbifrost-dev
  • libbiojava4-java
  • libbiosoup-dev
  • libbtllib-dev
  • libcapsule-maven-nextflow-java
  • libconcurrentqueue-dev
  • libdisorder-dev
  • libfast-perl
  • libforester-java
  • libfreecontact-dev
  • libfreecontact-doc
  • libfreecontact-perl
  • libgatk-bwamem-java
  • libgatk-bwamem-jni
  • libgatk-fermilite-java
  • libgatk-fermilite-jni
  • libgatk-native-bindings-java
  • libgenomicsdb-dev
  • libgenomicsdb-java
  • libicb-utils-java
  • libmaus2-dev
  • libmilib-java
  • libminimap-dev
  • libmmblib-dev
  • libmodhmm-dev
  • libnexml-java
  • libngs-sdk-dev
  • libpbcopper-dev
  • libpwiz-dev
  • libqcpp-dev
  • librelion-dev
  • libroadrunner-dev
  • librostlab-blast-doc
  • librostlab-doc
  • libsavvy-dev
  • libsuma-dev
  • libsvmloc-dev
  • libswarm2-dev
  • libterraces-dev
  • libtfbs-perl
  • libvbz-hdf-plugin-dev
  • libxxsds-dynamic-dev
  • nim-hts-dev
  • nim-kexpr-dev
  • nim-lapper-dev
  • octace-bioinfo
  • python-biopython-doc
  • python3-alignlib
  • python3-anndata
  • python3-bcbio
  • python3-bel-resources
  • python3-bioblend
  • python3-biopython-sql
  • python3-cgelib
  • python3-cobra
  • python3-cogent3
  • python3-compclust
  • python3-conda-package-streaming
  • python3-consensuscore2
  • python3-ctdopts
  • python3-galaxy-lib
  • python3-intake
  • python3-joypy
  • python3-loompy
  • python3-misopy
  • python3-ncls
  • python3-networkx
  • python3-pycosat
  • python3-pyflow
  • python3-roadrunner
  • python3-scanpy
  • python3-seqcluster
  • q2-alignment
  • q2-composition
  • q2-cutadapt
  • q2-dada2
  • q2-deblur
  • q2-demux
  • q2-diversity
  • q2-emperor
  • q2-feature-classifier
  • q2-feature-table
  • q2-fragment-insertion
  • q2-gneiss
  • q2-longitudinal
  • q2-metadata
  • q2-phylogeny
  • q2-quality-control
  • q2-quality-filter
  • q2-sample-classifier
  • q2-shogun
  • q2-taxa
  • q2-types
  • q2-vsearch
  • q2cli
  • q2cwl
  • q2lint
  • q2templates
  • qiime
  • r-bioc-affxparser
  • r-bioc-affy
  • r-bioc-affyio
  • r-bioc-altcdfenvs
  • r-bioc-annotate
  • r-bioc-annotationdbi
  • r-bioc-annotationhub
  • r-bioc-aroma.light
  • r-bioc-arrayexpress
  • r-bioc-biocgenerics
  • r-bioc-biocneighbors
  • r-bioc-biomart
  • r-bioc-biomformat
  • r-bioc-biostrings
  • r-bioc-biovizbase
  • r-bioc-bitseq
  • r-bioc-bridgedbr
  • r-bioc-bsgenome
  • r-bioc-cager
  • r-bioc-cner
  • r-bioc-complexheatmap
  • r-bioc-ctc
  • r-bioc-cummerbund
  • r-bioc-dada2
  • r-bioc-deseq2
  • r-bioc-dnacopy
  • r-bioc-ebseq
  • r-bioc-enrichedheatmap
  • r-bioc-ensembldb
  • r-bioc-genefilter
  • r-bioc-geneplotter
  • r-bioc-genomeinfodb
  • r-bioc-genomicalignments
  • r-bioc-genomicfeatures
  • r-bioc-genomicranges
  • r-bioc-geoquery
  • r-bioc-go.db
  • r-bioc-graph
  • r-bioc-gseabase
  • r-bioc-gsva
  • r-bioc-gviz
  • r-bioc-hypergraph
  • r-bioc-impute
  • r-bioc-iranges
  • r-bioc-limma
  • r-bioc-makecdfenv
  • r-bioc-mergeomics
  • r-bioc-metagenomeseq
  • r-bioc-mofa
  • r-bioc-multiassayexperiment
  • r-bioc-nanostringqcpro
  • r-bioc-oligo
  • r-bioc-oligoclasses
  • r-bioc-org.hs.eg.db
  • r-bioc-pcamethods
  • r-bioc-phyloseq
  • r-bioc-preprocesscore
  • r-bioc-purecn
  • r-bioc-qusage
  • r-bioc-rbgl
  • r-bioc-rentrez
  • r-bioc-rsamtools
  • r-bioc-rtracklayer
  • r-bioc-s4vectors
  • r-bioc-savr
  • r-bioc-shortread
  • r-bioc-snpstats
  • r-bioc-structuralvariantannotation
  • r-bioc-tfbstools
  • r-bioc-titancna
  • r-bioc-tximport
  • r-bioc-variantannotation
  • r-bioc-xvector
  • r-cran-adegenet
  • r-cran-adephylo
  • r-cran-amap
  • r-cran-biwt
  • r-cran-drinsight
  • r-cran-dt
  • r-cran-dynamictreecut
  • r-cran-fastcluster
  • r-cran-future.apply
  • r-cran-future.batchtools
  • r-cran-ica
  • r-cran-itertools
  • r-cran-kaos
  • r-cran-metap
  • r-cran-minerva
  • r-cran-natserv
  • r-cran-nmf
  • r-cran-optimalcutpoints
  • r-cran-parmigene
  • r-cran-pcapp
  • r-cran-proc
  • r-cran-rann
  • r-cran-rcpphnsw
  • r-cran-robustrankaggreg
  • r-cran-rocr
  • r-cran-rook
  • r-cran-rsvd
  • r-cran-shazam
  • r-cran-sitmo
  • r-cran-venndiagram
  • r-other-apmswapp
  • ruby-rgfa
  • vdjtools

Description

Debian Med packages for development of bioinformatics applications

Download .deb

Tags

Package classification tags

field::biology
role::metapackage
suite::debian
use::TODO

Checksums

Hash values and integrity verification status

TypeActualMatch
MD52927a67d…ae582ad2
SHA-11a30d16c…030a9e43
SHA-25674b590ad…cbe30b35
SHA-512bbff5f80…a798e483

Contents

Files and directories included

.
usr
usr/bin
usr/share
usr/share/blends
usr/share/blends/med
usr/share/blends/med/menu
usr/share/blends/med/menu/libncbi6-dev
usr/share/blends/tasks
usr/share/blends/tasks/med
usr/share/blends/tasks/med/bio-dev
usr/share/doc
usr/share/doc/med-bio-dev
usr/share/doc/med-bio-dev/README
usr/share/doc/med-bio-dev/README.Debian
usr/share/doc/med-bio-dev/changelog.gz
usr/share/doc/med-bio-dev/copyright
usr/share/man
usr/share/man/man1
usr/bin/med-bio-dev
usr/share/man/man1/med-bio-dev.1.gz