med-bio (3.9.0)
Details
Core information at a glance
- Distribution
- kali
- Origin
- kali-last-snapshot
- Repository
- https://http.kali.org/kali
- Codename
- kali-last-snapshot
- Component
- main
- Source
- debian-med
- Architecture
- i386
- Section
- metapackages
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 44 B
- Size expected
- 14.5 kB
- Size actual
- 14.5 kB
- Size match
Suggested packages
Recommended additional packages
- acacia
- acedb-other
- adun.app
- agat
- amos-assembler
- amoscmp
- anfo
- annovar
- apollo
- arachne
- arb
- arvados
- asap
- axparafit
- axpcoords
- bagpipe
- ballview
- bambus
- bax2bam
- bcbio
- biceps
- big-blast
- bigsdb
- bismark
- blat
- blimps-utils
- blobology
- braker
- btk-core
- cactus
- caftools
- canu
- card-rgi
- catfishq
- cdna-db
- cellprofiler
- cinema
- circlator
- cluster3
- cmap
- conda-package-handling
- condetri
- contrafold
- contralign
- copycat
- covpipe
- crossbow
- crux-toolkit
- cufflinks
- cytoscape
- dascrubber
- dazzle
- deepbinner
- deepnano
- dendroscope
- diann
- dnapi
- e-hive
- ecell
- embassy-phylip
- emboss-explorer
- ensembl
- ensembl-vep
- estferret
- euler-sr
- euler2
- exabayes
- exalt
- excavator
- ffp
- fieldbioinformatics
- figaro
- flappie
- forester
- forge
- galaxy
- gamgi
- gatk
- gbrowse-syn
- genemark
- genesplicer
- genetrack
- genezilla
- genographer
- gerp++
- getdata
- ghemical
- glimmerhmm
- gmv
- gramalign
- graphbin
- graphmap2
- haploview
- hawkeye
- hilive
- htqc
- hts-nim-tools
- idefix
- idseq-bench
- illustrate
- inspect
- jbrowse
- jigsaw
- jmodeltest
- kempbasu
- khmer
- libhdf5-dev
- libhnswlib-dev
- libpwiz-tools
- lofreq
- mach-haplotyper
- mage2tab
- maker2
- manta
- marginphase
- martj
- maude
- maxd
- medaka
- meme
- mesquite
- metabit
- metarep
- metastudent-data
- metastudent-data-2
- migrate
- mindthegap
- minimus
- mirbase
- modeller
- molekel
- mosaik-aligner
- mosdepth
- mpsqed
- mrs
- msatfinder
- mugsy
- mummergpu
- mview
- nano-snakemake
- nanocall
- nanocomp
- nanook
- nanoplot
- nanostat
- ncbi-magicblast
- nextsv
- ngila
- ngsqctoolkit
- nw-align
- oases
- obo-edit
- oligoarrayaux
- omegamap
- oncofuse
- operondb
- optitype
- paipline
- pangolin
- partigene
- partitionfinder
- patristic
- pbhoney
- pbjelly
- pbsuite
- pcma
- pfaat
- phagefinder
- phpphylotree
- phylographer
- phylophlan
- phyloviz-core
- phylowin
- pigx-scrnaseq
- pipasic
- plato
- pomoxis
- pplacer
- profit
- profphd
- prot4est
- psipred
- pssh2
- pufferfish
- purple
- pyrophosphate-tools
- python3-alignlib
- python3-anndata
- python3-cgecore
- python3-cogent3
- python3-cyvcf2
- python3-deeptools
- python3-deeptoolsintervals
- python3-htseq
- python3-intake
- python3-loompy
- python3-nanoget
- python3-nanomath
- python3-ncls
- python3-orange
- python3-py2bit
- python3-pybel
- python3-pychopper
- python3-pyfaidx
- python3-pyflow
- python3-pyranges
- python3-pyrle
- python3-pysam
- python3-tinyalign
- q2-alignment
- q2-composition
- q2-cutadapt
- q2-dada2
- q2-deblur
- q2-demux
- q2-diversity
- q2-emperor
- q2-feature-classifier
- q2-feature-table
- q2-fragment-insertion
- q2-gneiss
- q2-longitudinal
- q2-metadata
- q2-phylogeny
- q2-quality-control
- q2-quality-filter
- q2-sample-classifier
- q2-taxa
- q2-types
- q2-vsearch
- q2cli
- q2templates
- qiime
- qtlcart
- qtlreaper
- qualimap
- quast
- r-bioc-annotationhub
- r-bioc-aroma.light
- r-bioc-beachmat
- r-bioc-biocneighbors
- r-bioc-biocsingular
- r-bioc-bitseq
- r-bioc-ctc
- r-bioc-dnacopy
- r-bioc-ensembldb
- r-bioc-experimenthub
- r-bioc-geneplotter
- r-bioc-genomicalignments
- r-bioc-genomicfiles
- r-bioc-genomicranges
- r-bioc-go.db
- r-bioc-grohmm
- r-bioc-gviz
- r-bioc-isoformswitchanalyzer
- r-bioc-mofa2
- r-bioc-org.hs.eg.db
- r-bioc-org.mm.eg.db
- r-bioc-qusage
- r-bioc-savr
- r-bioc-singlecellexperiment
- r-bioc-structuralvariantannotation
- r-bioc-tximport
- r-cran-amap
- r-cran-biwt
- r-cran-boolnet
- r-cran-corrplot
- r-cran-drinsight
- r-cran-dynamictreecut
- r-cran-epir
- r-cran-fitdistrplus
- r-cran-forecast
- r-cran-genabel
- r-cran-gprofiler2
- r-cran-minerva
- r-cran-optimalcutpoints
- r-cran-parmigene
- r-cran-pheatmap
- r-cran-qqman
- r-cran-rcpphnsw
- r-cran-rentrez
- r-cran-sctransform
- r-other-apmswapp
- r-other-fastbaps
- raxml-ng
- rbs-finder
- rdp-classifier
- readucks
- relion-cuda
- relion-gui-cuda
- repeatmasker
- resfinder-db
- roadtrips
- roche454ace2caf
- rosa
- rose
- rsat
- sailfish
- sap
- science-workflow
- sepp
- seq-gen
- seq-seq-pan
- seqcluster
- seqwish
- sift
- signalalign
- sina
- sistr
- situs
- solvate
- sparta
- splitstree
- ssaha
- strap
- strap-base
- strelka
- tab2mage
- tacg
- tandem-genotypes
- taverna
- taxinspector
- tetra
- tide
- tigr-glimmer-mg
- tipp
- tn-seqexplorer
- tophat
- treebuilder3d
- tripal
- trnascan-se
- twain
- ufasta
- umap
- umap-learn
- umis
- unc-fish
- uniprime
- varmatch
- varscan
- vdjtools
- vg
- vienna-rna
- viewmol
- vmd
- x-tandem-pipeline
- zodiac-zeden
Description
Debian Med bioinformatics packages
Tags
Package classification tags
field::biology
role::metapackage
suite::debian
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | b08aaa09…3242617c | |
| SHA-1 | f9935194…819d6f86 | |
| SHA-256 | 5d05fd4e…d74d61bd | |
| SHA-512 | 7bf03dfa…dac596ce |
Contents
Files and directories included
. usr usr/bin usr/share usr/share/blends usr/share/blends/med usr/share/blends/med/menu usr/share/blends/med/menu/blast2 usr/share/blends/med/menu/ncbi-tools-bin usr/share/blends/med/menu/ncbi-tools-x11 usr/share/blends/tasks usr/share/blends/tasks/med usr/share/blends/tasks/med/bio usr/share/doc usr/share/doc/med-bio usr/share/doc/med-bio/README usr/share/doc/med-bio/README.Debian usr/share/doc/med-bio/changelog.gz usr/share/doc/med-bio/copyright usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/med-bio usr/share/man usr/share/man/man1 usr/bin/med-bio usr/share/man/man1/med-bio.1.gz