metastudent (2.0.1-10)

Details

Core information at a glance

Distribution
kali
Origin
kali-last-snapshot
Repository
https://http.kali.org/kali
Codename
kali-last-snapshot
Component
main
Source
none
Architecture
i386
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
95 kB
Size expected
6 MB
Size actual
6 MB
Size match

Dependencies

Required package dependencies

  • perl:any
  • python3:any
  • python3
  • ncbi-blast+-legacy
  • default-jre
  • libgo-perl
  • libipc-run-perl
  • libgraphviz-perl
  • libfile-chdir-perl
  • metastudent-data

Suggested packages

Recommended additional packages

  • None

Description

predictor of Gene Ontology terms from protein sequence

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5b7a401e2…8df30c1b
SHA-110a00d03…72c91f89
SHA-256e79a5716…761acb73
SHA-51206016e1c…59a8e818

Contents

Files and directories included

.
etc
etc/metastudentrc
usr
usr/bin
usr/bin/metastudent
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/metastudent-2.0.1.egg-info
usr/lib/python3/dist-packages/metastudent-2.0.1.egg-info/PKG-INFO
usr/lib/python3/dist-packages/metastudent-2.0.1.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/metastudent-2.0.1.egg-info/top_level.txt
usr/lib/python3/dist-packages/metastudentPkg
usr/lib/python3/dist-packages/metastudentPkg/BlastWrapper.py
usr/lib/python3/dist-packages/metastudentPkg/Logger.py
usr/lib/python3/dist-packages/metastudentPkg/__init__.py
usr/lib/python3/dist-packages/metastudentPkg/commons.py
usr/lib/python3/dist-packages/metastudentPkg/generateTermNameMapping.py
usr/lib/python3/dist-packages/metastudentPkg/lib
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/DataPreprocessing
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/DataPreprocessing/splitDB.py
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GOSSIP
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GOSSIP/.classpath
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GOSSIP/.project
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GOSSIP/temp.fasta
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GO_Parser
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GO_Parser/GO_Parents.2014.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GO_Parser/GO_Parents.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GO_Parser/src
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GO_Parser/src/.classpath
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/GO_Parser/src/.project
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/Validation
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/Validation/GO_Table.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/Validation/SIMPLECOUNT_0.8.val
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/Validation/SIMPLECOUNT_0.9.val
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/parser
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/parser/group2_blastParser.py
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/parser/group2_goParserSwissprot.py
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/parser/group2_goStatistics.py
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/parser/group4_blastParser.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/parser/group4_swissProtParser.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupA/report.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data/besthit.dist
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data/goterm2014.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data/goterm2term.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data/transitiveClosure2014.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data/unweighted.dist
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/data/weighted.dist
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/java
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/java/META-INF
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/java/META-INF/MANIFEST.MF
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/java/bla.tabularresults
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/GOaddpath.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/GOeval.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/GOfunctions.pm
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/GOmultifiles.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/addGO2BLAST.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/build_splitsets.rb
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/cafa_format_checker_2.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/call_build_splitsets.readme
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/evaluate.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/filter_fasta.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/go_filter_cc.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/make_percent.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/make_splits.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/parse_GO_hierarchy.xslt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/parse_GO_terms.xslt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/parse_blast.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/readme.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/splitall.sh
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/splitall_clusters.sh
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/swissprot_extract_go.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/perl/test2eval.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/pp2
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/pp2/.classpath
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/pp2/.project
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/pp2/tools
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/pp2/tools/cafa_format_checker_2.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/run
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/run/knn_weighted
usr/lib/python3/dist-packages/metastudentPkg/lib/groupB/run/run_knn_weighted
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/CafaWrapper1.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/CafaWrapper2.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/CafaWrapper3.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/CafaWrapper3_new.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/Report.doc
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/Report.pdf
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/exercise3.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/transitiveClosure2014.txt
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/treehandler.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/treehandler_new.pl
usr/lib/python3/dist-packages/metastudentPkg/lib/groupC/validate.pl
usr/lib/python3/dist-packages/metastudentPkg/runMethods.py
usr/lib/python3/dist-packages/metastudentPkg/version.py
usr/share
usr/share/doc
usr/share/doc/metastudent
usr/share/doc/metastudent/README.Debian
usr/share/doc/metastudent/README.test
usr/share/doc/metastudent/changelog.Debian.gz
usr/share/doc/metastudent/changelog.gz
usr/share/doc/metastudent/copyright
usr/share/doc/metastudent/examples
usr/share/doc/metastudent/examples/test.fasta
usr/share/doc/metastudent/examples/test.result.BPO.txt
usr/share/doc/metastudent/examples/test.result.CCO.txt
usr/share/doc/metastudent/examples/test.result.MFO.txt
usr/share/doc/metastudent/run-unit-test
usr/share/man
usr/share/man/man1
usr/share/man/man1/metastudent.1.gz
usr/share/metastudent
usr/share/metastudent/blastfilep.jar
usr/share/metastudent/gossip.jar
usr/share/metastudent/metastudentrc.default
usr/share/metastudent/pp2.jar