nanosv (1.2.4+git20190409.c1ae30c-7)

Details

Core information at a glance

Distribution: kali
Origin: kali-last-snapshot
Repository: https://http.kali.org/kali
Codename: kali-last-snapshot
Component: main
Source: none
Architecture: i386
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size: 20.6 kB
Size expected: 2.9 MB
Size actual: 2.9 MB
Size match

Dependencies

Required package dependencies

python3-pysam
python3-vcf
python3:any

Suggested packages

Recommended additional packages

None

Description

structural variant caller for nanopore data

Homepage Download .deb

Checksums

Hash values and integrity verification status

Type	Expected	Actual
MD5	8e9789f1…c5c6cc86	8e9789f1…c5c6cc86
SHA-1	ba16a390…7427cb30	ba16a390…7427cb30
SHA-256	8ead7740…5ca269bd	8ead7740…5ca269bd
SHA-512	Not provided	195eefd1…8d037e6e

Files and directories included

.
usr
usr/bin
usr/bin/NanoSV
usr/lib
usr/lib/python3
usr/lib/python3/dist-packages
usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info
usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/PKG-INFO
usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/dependency_links.txt
usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/entry_points.txt
usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/requires.txt
usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/top_level.txt
usr/lib/python3/dist-packages/nanosv
usr/lib/python3/dist-packages/nanosv/NanoSV.py
usr/lib/python3/dist-packages/nanosv/__init__.py
usr/lib/python3/dist-packages/nanosv/bedfiles
usr/lib/python3/dist-packages/nanosv/bedfiles/human_hg19.bed
usr/lib/python3/dist-packages/nanosv/classes
usr/lib/python3/dist-packages/nanosv/classes/__init__.py
usr/lib/python3/dist-packages/nanosv/classes/breakpoint.py
usr/lib/python3/dist-packages/nanosv/classes/read.py
usr/lib/python3/dist-packages/nanosv/classes/segment.py
usr/lib/python3/dist-packages/nanosv/classes/sv.py
usr/lib/python3/dist-packages/nanosv/classes/variant.py
usr/lib/python3/dist-packages/nanosv/config.ini
usr/lib/python3/dist-packages/nanosv/utils
usr/lib/python3/dist-packages/nanosv/utils/__init__.py
usr/lib/python3/dist-packages/nanosv/utils/coverage.py
usr/lib/python3/dist-packages/nanosv/utils/create_vcf.py
usr/lib/python3/dist-packages/nanosv/utils/parse_bam.py
usr/lib/python3/dist-packages/nanosv/utils/parse_breakpoints.py
usr/lib/python3/dist-packages/nanosv/utils/parse_reads.py
usr/lib/python3/dist-packages/nanosv/utils/parse_svs.py
usr/lib/python3/dist-packages/nanosv/utils/phasing.py
usr/lib/python3/dist-packages/nanosv/version.py
usr/share
usr/share/doc
usr/share/doc/nanosv
usr/share/doc/nanosv/README.md.gz
usr/share/doc/nanosv/README.test
usr/share/doc/nanosv/changelog.Debian.gz
usr/share/doc/nanosv/copyright
usr/share/doc/nanosv/run-unit-test
usr/share/man
usr/share/man/man1
usr/share/man/man1/NanoSV.1.gz