samtools (1.22.1-1)
Details
Core information at a glance
- Distribution
- kali
- Origin
- kali-rolling
- Repository
- https://http.kali.org/kali
- Codename
- kali-rolling
- Component
- main
- Source
- none
- Architecture
- i386
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 1.6 kB
- Size expected
- 730.5 kB
- Size actual
- 730.5 kB
- Size match
Dependencies
Required package dependencies
Description
processing sequence alignments in SAM, BAM and CRAM formats
Tags
Package classification tags
field::biology
field::biology:bioinformatics
implemented-in::c
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | e8f472d5…ef508c35 | |
| SHA-1 | 7af2d7ef…1c120904 | |
| SHA-256 | f6b89752…d1a884a8 | |
| SHA-512 | 7b760ec1…5f8d7b44 |
Contents
Files and directories included
. usr usr/bin usr/bin/ace2sam usr/bin/blast2sam.pl usr/bin/bowtie2sam.pl usr/bin/export2sam.pl usr/bin/fasta-sanitize.pl usr/bin/interpolate_sam.pl usr/bin/maq2sam-long usr/bin/maq2sam-short usr/bin/md5fa usr/bin/md5sum-lite usr/bin/novo2sam.pl usr/bin/plot-ampliconstats usr/bin/plot-bamstats usr/bin/psl2sam.pl usr/bin/sam2vcf.pl usr/bin/samtools usr/bin/samtools.pl usr/bin/seq_cache_populate.pl usr/bin/soap2sam.pl usr/bin/wgsim usr/bin/wgsim_eval.pl usr/bin/zoom2sam.pl usr/share usr/share/commonwl usr/share/commonwl/samtools-faidx.cwl usr/share/commonwl/samtools-index.cwl usr/share/commonwl/samtools-rmdup.cwl usr/share/commonwl/samtools-sort.cwl usr/share/commonwl/samtools-view.cwl usr/share/doc usr/share/doc/samtools usr/share/doc/samtools/AUTHORS usr/share/doc/samtools/README.Debian usr/share/doc/samtools/README.gz usr/share/doc/samtools/README.test usr/share/doc/samtools/changelog.Debian.gz usr/share/doc/samtools/changelog.gz usr/share/doc/samtools/copyright usr/share/doc/samtools/examples usr/share/doc/samtools/examples/00README.txt usr/share/doc/samtools/examples/ex1.fa usr/share/doc/samtools/examples/ex1.sam.gz usr/share/doc/samtools/examples/toy.fa usr/share/doc/samtools/examples/toy.sam usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/samtools usr/share/man usr/share/man/man1 usr/share/man/man1/ace2sam.1.gz usr/share/man/man1/samtools-addreplacerg.1.gz usr/share/man/man1/samtools-ampliconclip.1.gz usr/share/man/man1/samtools-ampliconstats.1.gz usr/share/man/man1/samtools-bedcov.1.gz usr/share/man/man1/samtools-calmd.1.gz usr/share/man/man1/samtools-cat.1.gz usr/share/man/man1/samtools-checksum.1.gz usr/share/man/man1/samtools-collate.1.gz usr/share/man/man1/samtools-consensus.1.gz usr/share/man/man1/samtools-coverage.1.gz usr/share/man/man1/samtools-cram-size.1.gz usr/share/man/man1/samtools-depad.1.gz usr/share/man/man1/samtools-depth.1.gz usr/share/man/man1/samtools-dict.1.gz usr/share/man/man1/samtools-faidx.1.gz usr/share/man/man1/samtools-fasta.1.gz usr/share/man/man1/samtools-fixmate.1.gz usr/share/man/man1/samtools-flags.1.gz usr/share/man/man1/samtools-flagstat.1.gz usr/share/man/man1/samtools-fqidx.1.gz usr/share/man/man1/samtools-head.1.gz usr/share/man/man1/samtools-idxstats.1.gz usr/share/man/man1/samtools-import.1.gz usr/share/man/man1/samtools-index.1.gz usr/share/man/man1/samtools-markdup.1.gz usr/share/man/man1/samtools-merge.1.gz usr/share/man/man1/samtools-mpileup.1.gz usr/share/man/man1/samtools-phase.1.gz usr/share/man/man1/samtools-quickcheck.1.gz usr/share/man/man1/samtools-reference.1.gz usr/share/man/man1/samtools-reheader.1.gz usr/share/man/man1/samtools-reset.1.gz usr/share/man/man1/samtools-rmdup.1.gz usr/share/man/man1/samtools-samples.1.gz usr/share/man/man1/samtools-sort.1.gz usr/share/man/man1/samtools-split.1.gz usr/share/man/man1/samtools-stats.1.gz usr/share/man/man1/samtools-targetcut.1.gz usr/share/man/man1/samtools-tview.1.gz usr/share/man/man1/samtools-view.1.gz usr/share/man/man1/samtools.1.gz usr/share/man/man1/samtools.pl.1.gz usr/share/man/man1/wgsim.1.gz usr/share/man/man1/samtools-fastq.1.gz