seer (1.1.4-8+b2)

Details

Core information at a glance

Distribution
kali
Origin
kali-rolling
Repository
https://http.kali.org/kali
Codename
kali-rolling
Component
main
Source
seer (1.1.4-8)
Architecture
i386
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
5 kB
Size expected
1.2 MB
Size actual
1.2 MB
Size match

Dependencies

Required package dependencies

  • libarmadillo15 (>= 1:15.2.1+dfsg)
  • libblas3 | libblas.so.3
  • libboost-program-options1.83.0 (>= 1.83.0)
  • libc6 (>= 2.38)
  • libgcc-s1 (>= 7)
  • libgzstream0 (>= 1.5+git20171107.9a20658)
  • libhdf5-310 (>= 1.14.3)
  • libstdc++6 (>= 14)
  • zlib1g (>= 1:1.1.4)
  • libtext-csv-perl

Suggested packages

Recommended additional packages

  • fsm-lite

Description

genomic sequence element (kmer) enrichment analysis

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD573d3dc9d…e6ee336f
SHA-11ec7abe9…d8716d93
SHA-256b0a92364…de4b90d2
SHA-512cf2adc6a…8b872f31

Contents

Files and directories included

.
usr
usr/bin
usr/bin/R_mds
usr/bin/blast_top_hits
usr/bin/blastn_to_phandango
usr/bin/combineKmers
usr/bin/filter_seer
usr/bin/hits_to_fastq
usr/bin/kmds
usr/bin/map_back
usr/bin/mapping_to_phandango
usr/bin/mash2matrix
usr/bin/reformat_output
usr/bin/seer
usr/share
usr/share/doc
usr/share/doc/seer
usr/share/doc/seer/README.Debian
usr/share/doc/seer/README.source
usr/share/doc/seer/README.test
usr/share/doc/seer/changelog.Debian.gz
usr/share/doc/seer/changelog.Debian.i386.gz
usr/share/doc/seer/copyright
usr/share/doc/seer/examples
usr/share/doc/seer/examples/6259_5_16.fa
usr/share/doc/seer/examples/Makefile
usr/share/doc/seer/examples/all_structure_new
usr/share/doc/seer/examples/all_structure_new.samples
usr/share/doc/seer/examples/assembly_locations.txt
usr/share/doc/seer/examples/covariates.txt
usr/share/doc/seer/examples/example.pheno
usr/share/doc/seer/examples/example_kmers.gz
usr/share/doc/seer/examples/example_wrapper.py
usr/share/doc/seer/examples/filter_in.txt
usr/share/doc/seer/examples/generate_test.pl
usr/share/doc/seer/examples/map_in.txt
usr/share/doc/seer/examples/run_test.pl
usr/share/doc/seer/examples/subset.cont.pheno
usr/share/doc/seer/examples/subset.pheno
usr/share/doc/seer/examples/test1.e.txt
usr/share/doc/seer/examples/test1.o.txt
usr/share/doc/seer/examples/test2.e.txt
usr/share/doc/seer/examples/test2.o.txt
usr/share/doc/seer/examples/test3.e.txt
usr/share/doc/seer/examples/test3.o.txt
usr/share/doc/seer/examples/test4.e.txt
usr/share/doc/seer/examples/test4.o.txt
usr/share/doc/seer/examples/test5.e.txt
usr/share/doc/seer/examples/test5.o.txt
usr/share/doc/seer/examples/test6.e.txt
usr/share/doc/seer/examples/test6.o.txt
usr/share/doc/seer/examples/test7.e.txt
usr/share/doc/seer/examples/test7.o.txt
usr/share/doc/seer/examples/test8.e.txt
usr/share/doc/seer/examples/test8.o.txt
usr/share/doc/seer/examples/tests_passed
usr/share/doc/seer/run-unit-test
usr/share/man
usr/share/man/man1
usr/share/man/man1/R_mds.1.gz
usr/share/man/man1/blast_top_hits.1.gz
usr/share/man/man1/blastn_to_phandango.1.gz
usr/share/man/man1/combineKmers.1.gz
usr/share/man/man1/filter_seer.1.gz
usr/share/man/man1/hits_to_fastq.1.gz
usr/share/man/man1/kmds.1.gz
usr/share/man/man1/map_back.1.gz
usr/share/man/man1/mapping_to_phandango.1.gz
usr/share/man/man1/mash2matrix.1.gz
usr/share/man/man1/reformat_output.1.gz
usr/share/man/man1/seer.1.gz