stacks (2.68+dfsg-4)
Details
Core information at a glance
- Distribution
- kali
- Origin
- kali-rolling
- Repository
- https://http.kali.org/kali
- Codename
- kali-rolling
- Component
- main
- Source
- none
- Architecture
- i386
- Section
- science
- Priority
- optional
- Maintainer
- Debian Med Packaging Team <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 6.5 kB
- Size expected
- 1.3 MB
- Size actual
- 1.3 MB
- Size match
Dependencies
Required package dependencies
Description
pipeline for building loci from short-read DNA sequences
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | eea843b3…2c4bfe7a | |
| SHA-1 | f9969a6c…e543ff16 | |
| SHA-256 | e7f6a2e1…c5a05831 | |
| SHA-512 | a5e6d5bb…7805b49f |
Contents
Files and directories included
. usr usr/bin usr/bin/stacks usr/libexec usr/libexec/debian-med usr/libexec/debian-med/bin usr/libexec/stacks usr/libexec/stacks/bin usr/libexec/stacks/bin/clone_filter usr/libexec/stacks/bin/cstacks usr/libexec/stacks/bin/denovo_map.pl usr/libexec/stacks/bin/gstacks usr/libexec/stacks/bin/kmer_filter usr/libexec/stacks/bin/phasedstacks usr/libexec/stacks/bin/populations usr/libexec/stacks/bin/process_radtags usr/libexec/stacks/bin/process_shortreads usr/libexec/stacks/bin/ref_map.pl usr/libexec/stacks/bin/sstacks usr/libexec/stacks/bin/stacks-count-reads-per-sample-per-locus usr/libexec/stacks/bin/stacks-dist-extract usr/libexec/stacks/bin/stacks-gdb usr/libexec/stacks/bin/stacks-hist2d-loci-samples-coverage usr/libexec/stacks/bin/stacks-integrate-alignments usr/libexec/stacks/bin/stacks-private-alleles usr/libexec/stacks/bin/stacks-samtools-tview usr/libexec/stacks/bin/tsv2bam usr/libexec/stacks/bin/ustacks usr/share usr/share/doc usr/share/doc/stacks usr/share/doc/stacks/README.Debian usr/share/doc/stacks/changelog.Debian.gz usr/share/doc/stacks/changelog.gz usr/share/doc/stacks/copyright usr/libexec/debian-med/bin/clone_filter usr/libexec/debian-med/bin/cstacks usr/libexec/debian-med/bin/denovo_map usr/libexec/debian-med/bin/denovo_map.pl usr/libexec/debian-med/bin/gstacks usr/libexec/debian-med/bin/kmer_filter usr/libexec/debian-med/bin/phasedstacks usr/libexec/debian-med/bin/populations usr/libexec/debian-med/bin/process_radtags usr/libexec/debian-med/bin/process_shortreads usr/libexec/debian-med/bin/ref_map usr/libexec/debian-med/bin/ref_map.pl usr/libexec/debian-med/bin/sstacks usr/libexec/debian-med/bin/stacks-count-reads-per-sample-per-locus usr/libexec/debian-med/bin/stacks-dist-extract usr/libexec/debian-med/bin/stacks-gdb usr/libexec/debian-med/bin/stacks-hist2d-loci-samples-coverage usr/libexec/debian-med/bin/stacks-integrate-alignments usr/libexec/debian-med/bin/stacks-private-alleles usr/libexec/debian-med/bin/stacks-samtools-tview usr/libexec/debian-med/bin/tsv2bam usr/libexec/debian-med/bin/ustacks usr/libexec/stacks/bin/denovo_map usr/libexec/stacks/bin/ref_map