staden (2.0.0+b11-7)

Details

Core information at a glance

Distribution
kali
Origin
kali-rolling
Repository
https://http.kali.org/kali
Codename
kali-rolling
Component
main
Source
none
Architecture
i386
Section
science
Priority
optional
Maintainer
Debian Med Packaging Team <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
5.2 kB
Size expected
1.7 MB
Size actual
1.7 MB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.0)
  • liblzma5 (>= 5.1.1alpha+20120614)
  • libpng16-16t64 (>= 1.6.46)
  • libstaden-read14t64 (>= 1.14.12)
  • libstdc++6 (>= 5)
  • libtcl8.6 (>= 8.6.0)
  • libtk8.6 (>= 8.6.0)
  • libx11-6
  • zlib1g (>= 1:1.1.4)
  • staden-common (= 2.0.0+b11-7)
  • staden-io-lib-utils
  • tklib

Suggested packages

Recommended additional packages

  • None

Description

DNA sequence assembly (Gap4/Gap5), editing and analysis tools

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5237bb8b7…54ea29be
SHA-162f182a2…afe4cd93
SHA-256b86e1b39…e231e62f
SHA-512134e2522…8f1fe505

Contents

Files and directories included

.
usr
usr/bin
usr/bin/gap4
usr/bin/staden
usr/lib
usr/lib/debian-med
usr/lib/debian-med/bin
usr/lib/debian-med/share
usr/lib/debian-med/share/man
usr/lib/debian-med/share/man/man1
usr/lib/debian-med/share/man/man1/spin.1.gz
usr/lib/staden
usr/lib/staden/bin
usr/lib/staden/bin/alfsplit
usr/lib/staden/bin/copy_db
usr/lib/staden/bin/copy_reads
usr/lib/staden/bin/create_emboss_files
usr/lib/staden/bin/eba
usr/lib/staden/bin/find_renz
usr/lib/staden/bin/gap4
usr/lib/staden/bin/gap5
usr/lib/staden/bin/gap5_cmd
usr/lib/staden/bin/getABISampleName
usr/lib/staden/bin/getABIcomment
usr/lib/staden/bin/getABIdate
usr/lib/staden/bin/getABIfield
usr/lib/staden/bin/get_scf_field
usr/lib/staden/bin/hetins
usr/lib/staden/bin/init_exp
usr/lib/staden/bin/make_weights
usr/lib/staden/bin/mutscan
usr/lib/staden/bin/polyA_clip
usr/lib/staden/bin/prefinish
usr/lib/staden/bin/pregap4
usr/lib/staden/bin/qclip
usr/lib/staden/bin/screen_seq
usr/lib/staden/bin/spin
usr/lib/staden/bin/staden_convert
usr/lib/staden/bin/stash
usr/lib/staden/bin/stops
usr/lib/staden/bin/tg_index
usr/lib/staden/bin/tg_index.bin
usr/lib/staden/bin/tracediff
usr/lib/staden/bin/trev
usr/lib/staden/bin/vector_clip
usr/lib/staden/libcopy_reads.so
usr/lib/staden/libg.so
usr/lib/staden/libgap.so
usr/lib/staden/libgap5.so
usr/lib/staden/libhaplo.so
usr/lib/staden/libmisc.so
usr/lib/staden/libmutlib.so
usr/lib/staden/libprefinish.so
usr/lib/staden/libprimer3.so
usr/lib/staden/libseq_utils.so
usr/lib/staden/libspin.so
usr/lib/staden/libtext_utils.so
usr/lib/staden/libtk_utils.so
usr/share
usr/share/applications
usr/share/applications/gap4.desktop
usr/share/applications/gap5.desktop
usr/share/applications/pregap4.desktop
usr/share/applications/trev.desktop
usr/share/bash-completion
usr/share/bash-completion/completions
usr/share/bash-completion/completions/staden
usr/share/doc
usr/share/doc/staden
usr/share/doc/staden/README.Debian
usr/share/doc/staden/changelog.Debian.gz
usr/share/doc/staden/changelog.gz
usr/share/doc/staden/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/gap4.1.gz
usr/share/man/man1/gap5.1.gz
usr/share/man/man1/pregap4.1.gz
usr/share/man/man1/trev.1.gz
usr/share/staden
usr/share/staden/icon4bl.svg
usr/bin/gap5
usr/bin/pregap4
usr/bin/trev
usr/lib/debian-med/bin/spin