python3-pairtools (1.1.3-2build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- pairtools
- Architecture
- amd64
- Section
- universe/python
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 842.8 kB
- Size expected
- 204.4 kB
- Size actual
- 204.4 kB
- Size match
- match
Dependencies
Required package dependencies
- python3-standard-pipes
- python3 (<< 3.15)
- python3 (>= 3.14~)
- python3-bioframe
- python3-click
- python3-numpy
- python3-numpy2-abi0|python3-numpy-abi9
- python3-pandas
- python3-pysam (>= 0.20.0+ds-3~)
- python3-scipy
- python3-yaml
- python3:any
- libc6 (>= 2.14)
- libgcc-s1 (>= 3.0)
- libstdc++6 (>= 5.2)
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
- python3-pairtools-examples (>= 1.0.2)
Provides
Virtual packages provided
- None
Description
Framework to process sequencing data from a Hi-C experiment
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 0d36deb0…5692af34 | not available |
| SHA-1 | d5723137…e74b963f | not available |
| SHA-256 | ad7d182b…d665b7c6 | not available |
| SHA-512 | 7363b83e…d58a6a22 | match |
Contents
Files and directories included
. usr usr/bin usr/bin/pairtools usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/pairtools usr/lib/python3/dist-packages/pairtools/__init__.py usr/lib/python3/dist-packages/pairtools/__main__.py usr/lib/python3/dist-packages/pairtools/_logging.py usr/lib/python3/dist-packages/pairtools/cli usr/lib/python3/dist-packages/pairtools/cli/__init__.py usr/lib/python3/dist-packages/pairtools/cli/dedup.py usr/lib/python3/dist-packages/pairtools/cli/filterbycov.py usr/lib/python3/dist-packages/pairtools/cli/flip.py usr/lib/python3/dist-packages/pairtools/cli/header.py usr/lib/python3/dist-packages/pairtools/cli/markasdup.py usr/lib/python3/dist-packages/pairtools/cli/merge.py usr/lib/python3/dist-packages/pairtools/cli/parse.py usr/lib/python3/dist-packages/pairtools/cli/parse2.py usr/lib/python3/dist-packages/pairtools/cli/phase.py usr/lib/python3/dist-packages/pairtools/cli/restrict.py usr/lib/python3/dist-packages/pairtools/cli/sample.py usr/lib/python3/dist-packages/pairtools/cli/scaling.py usr/lib/python3/dist-packages/pairtools/cli/select.py usr/lib/python3/dist-packages/pairtools/cli/sort.py usr/lib/python3/dist-packages/pairtools/cli/split.py usr/lib/python3/dist-packages/pairtools/cli/stats.py usr/lib/python3/dist-packages/pairtools/lib usr/lib/python3/dist-packages/pairtools/lib/__init__.py usr/lib/python3/dist-packages/pairtools/lib/dedup.py usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pairtools/lib/dedup_cython.pyx usr/lib/python3/dist-packages/pairtools/lib/fileio.py usr/lib/python3/dist-packages/pairtools/lib/filterbycov.py usr/lib/python3/dist-packages/pairtools/lib/headerops.py usr/lib/python3/dist-packages/pairtools/lib/pairsam_format.py usr/lib/python3/dist-packages/pairtools/lib/pairsio.py usr/lib/python3/dist-packages/pairtools/lib/parse.py usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pxd usr/lib/python3/dist-packages/pairtools/lib/parse_pysam.pyx usr/lib/python3/dist-packages/pairtools/lib/phase.py usr/lib/python3/dist-packages/pairtools/lib/regions.cpython-314-x86_64-linux-gnu.so usr/lib/python3/dist-packages/pairtools/lib/regions.pyx usr/lib/python3/dist-packages/pairtools/lib/restrict.py usr/lib/python3/dist-packages/pairtools/lib/scaling.py usr/lib/python3/dist-packages/pairtools/lib/select.py usr/lib/python3/dist-packages/pairtools/lib/stats.py usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/INSTALLER usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/METADATA usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/WHEEL usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/entry_points.txt usr/lib/python3/dist-packages/pairtools-1.1.3.dist-info/top_level.txt usr/share usr/share/doc usr/share/doc/python3-pairtools usr/share/doc/python3-pairtools/README.test usr/share/doc/python3-pairtools/changelog.Debian.gz usr/share/doc/python3-pairtools/copyright