nanopolish (0.14.0-2build2)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- nanopolish
- Architecture
- amd64v3
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 9.9 MB
- Size expected
- 2.4 MB
- Size actual
- 2.4 MB
- Size match
- match
Dependencies
Required package dependencies
- libc6 (>= 2.38)
- libgcc-s1 (>= 3.3.1)
- libgomp1 (>= 6)
- libhdf5-310 (>= 1.14.3)
- libhts3t64 (>= 1.17)
- libslow5-0t64 (>= 0.5.1)
- libstdc++6 (>= 14)
- libstreamvbyte1 (>= 0.4.1)
- zlib1g (>= 1:1.1.4)
- python3:any
- perl:any
Recommends
Recommended package dependencies
Provides
Virtual packages provided
- None
Description
consensus caller for nanopore sequencing data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | bfc99e3d…e9aade3b | match |
| SHA-1 | 8aeab3f1…044c3f9d | match |
| SHA-256 | f3b60976…313a891e | match |
| SHA-512 | f2c11b2b…9935074f | match |
Contents
Files and directories included
. usr usr/bin usr/bin/nanopolish usr/bin/nanopolish_makerange usr/lib usr/lib/nanopolish usr/lib/nanopolish/calculate_methylation_frequency.py usr/lib/nanopolish/consensus-preprocess.pl usr/lib/nanopolish/consensus.make usr/lib/nanopolish/convert_all_models.py usr/lib/nanopolish/convert_model_to_header.py usr/lib/nanopolish/dropmodel.py usr/lib/nanopolish/extract_reads_aligned_to_region.py usr/lib/nanopolish/import_ont_model.py usr/lib/nanopolish/import_ont_models_from_dir.sh usr/lib/nanopolish/nanopolish_makerange.py usr/lib/nanopolish/nanopolish_merge.py usr/lib/nanopolish/nanopolish_test usr/lib/nanopolish/polya_training usr/lib/nanopolish/polya_training/dump_signal.py usr/lib/nanopolish/polya_training/environment.yml usr/lib/nanopolish/polya_training/hmmplot.py usr/lib/nanopolish/polya_training/retrain_emission.py usr/lib/nanopolish/polya_training/workflow.md usr/lib/nanopolish/reestimate_polya_emissions.py usr/lib/nanopolish/requirements.txt usr/share usr/share/doc usr/share/doc/nanopolish usr/share/doc/nanopolish/README.Debian usr/share/doc/nanopolish/README.md.gz usr/share/doc/nanopolish/README.test usr/share/doc/nanopolish/changelog.Debian.gz usr/share/doc/nanopolish/copyright usr/share/doc/nanopolish/examples usr/share/doc/nanopolish/examples/data usr/share/doc/nanopolish/examples/data/LomanLabz_PC_Ecoli_K12_R7.3_2549_1_ch8_file30_strand.fast5 usr/share/doc/nanopolish/run-unit-test usr/share/man usr/share/man/man1 usr/share/man/man1/nanopolish.1.gz usr/share/python3 usr/share/python3/runtime.d usr/share/python3/runtime.d/nanopolish.rtupdate