plasmidid (1.6.5+dfsg-2build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- plasmidid
- Architecture
- amd64v3
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 336.9 kB
- Size expected
- 46.9 kB
- Size actual
- 46.9 kB
- Size match
- match
Dependencies
Required package dependencies
Recommends
Recommended package dependencies
Suggested packages
Recommended additional packages
- None
Provides
Virtual packages provided
- None
Description
mapping-based, assembly-assisted plasmid identification tool
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 9de0c542…3cb9eba2 | not available |
| SHA-1 | 6430a5a9…17a3747c | not available |
| SHA-256 | 5c691871…09848695 | not available |
| SHA-512 | 5ab6127f…0a31a3e8 | match |
Contents
Files and directories included
. etc etc/plasmidid etc/plasmidid/OR.conf etc/plasmidid/annotation_config_file.txt etc/plasmidid/circos_individual_1_3_0.conf etc/plasmidid/circos_individual_1_3_3.conf etc/plasmidid/circos_summary_1_3_0.conf etc/plasmidid/circos_summary_1_3_3.conf etc/plasmidid/simple.conf usr usr/bin usr/bin/plasmidID usr/share usr/share/doc usr/share/doc/plasmidid usr/share/doc/plasmidid/changelog.Debian.gz usr/share/doc/plasmidid/copyright usr/share/man usr/share/man/man1 usr/share/man/man1/plasmidID.1.gz usr/share/plasmidid usr/share/plasmidid/bin usr/share/plasmidid/bin/adapt_filter_coverage.sh usr/share/plasmidid/bin/blast_align.sh usr/share/plasmidid/bin/blast_to_bed.sh usr/share/plasmidid/bin/blast_to_complete.sh usr/share/plasmidid/bin/blast_to_link.sh usr/share/plasmidid/bin/bowtie_mapper.sh usr/share/plasmidid/bin/build_karyotype.sh usr/share/plasmidid/bin/calculate_seqlen.sh usr/share/plasmidid/bin/cdhit_cluster.sh usr/share/plasmidid/bin/check_dependencies.sh usr/share/plasmidid/bin/check_mandatory_files.sh usr/share/plasmidid/bin/coordinate_adapter.sh usr/share/plasmidid/bin/download_plasmid_database.py usr/share/plasmidid/bin/draw_circos_images.sh usr/share/plasmidid/bin/filter_fasta.sh usr/share/plasmidid/bin/get_coverage.sh usr/share/plasmidid/bin/gff_to_bed.sh usr/share/plasmidid/bin/mash_screener.sh usr/share/plasmidid/bin/mashclust.py usr/share/plasmidid/bin/ncbi_database_fetcher.sh usr/share/plasmidid/bin/process_cluster_output.sh usr/share/plasmidid/bin/prokka_annotation.sh usr/share/plasmidid/bin/quality_trim.sh usr/share/plasmidid/bin/rename_from_fasta.sh usr/share/plasmidid/bin/sam_to_bam.sh usr/share/plasmidid/bin/spades_assembly.sh usr/share/plasmidid/bin/summary_report_pid.py usr/share/plasmidid/bin/summary_table.sh usr/share/plasmidid/plasmidID usr/share/python3 usr/share/python3/runtime.d usr/share/python3/runtime.d/plasmidid.rtupdate