python3-pychopper (2.7.10-1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- pychopper
- Architecture
- amd64v3
- Section
- universe/python
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 413.7 kB
- Size expected
- 150.2 kB
- Size actual
- 150.2 kB
- Size match
- match
Dependencies
Required package dependencies
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
- None
Provides
Virtual packages provided
- None
Description
identify, orient and trim full-length Nanopore cDNA reads
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 058e7cf3…89f665f9 | match |
| SHA-1 | 61be832f…c514f248 | match |
| SHA-256 | 3fd06c6d…15ee6d5e | match |
| SHA-512 | 1eda30e5…d2b340c4 | match |
Contents
Files and directories included
. usr usr/bin usr/bin/pychopper usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/pychopper usr/lib/python3/dist-packages/pychopper/__init__.py usr/lib/python3/dist-packages/pychopper/alignment_hits.py usr/lib/python3/dist-packages/pychopper/chopper.py usr/lib/python3/dist-packages/pychopper/common_structures.py usr/lib/python3/dist-packages/pychopper/edlib_backend.py usr/lib/python3/dist-packages/pychopper/hmmer_backend.py usr/lib/python3/dist-packages/pychopper/parasail_backend.py usr/lib/python3/dist-packages/pychopper/phmm_data usr/lib/python3/dist-packages/pychopper/phmm_data/PCS110_primers.hmm usr/lib/python3/dist-packages/pychopper/phmm_data/PCS110_primers.hmm.h3f usr/lib/python3/dist-packages/pychopper/phmm_data/PCS110_primers.hmm.h3i usr/lib/python3/dist-packages/pychopper/phmm_data/PCS110_primers.hmm.h3m usr/lib/python3/dist-packages/pychopper/phmm_data/PCS110_primers.hmm.h3p usr/lib/python3/dist-packages/pychopper/phmm_data/__init__.py usr/lib/python3/dist-packages/pychopper/phmm_data/cDNA_SSP_VNP.hmm usr/lib/python3/dist-packages/pychopper/phmm_data/cDNA_SSP_VNP.hmm.h3f usr/lib/python3/dist-packages/pychopper/phmm_data/cDNA_SSP_VNP.hmm.h3i usr/lib/python3/dist-packages/pychopper/phmm_data/cDNA_SSP_VNP.hmm.h3m usr/lib/python3/dist-packages/pychopper/phmm_data/cDNA_SSP_VNP.hmm.h3p usr/lib/python3/dist-packages/pychopper/primer_data usr/lib/python3/dist-packages/pychopper/primer_data/LSK114_primers.fas usr/lib/python3/dist-packages/pychopper/primer_data/PCS110_primers.fas usr/lib/python3/dist-packages/pychopper/primer_data/PCS111_primers.fas usr/lib/python3/dist-packages/pychopper/primer_data/__init__.py usr/lib/python3/dist-packages/pychopper/primer_data/cDNA_SSP_VNP.fas usr/lib/python3/dist-packages/pychopper/report.py usr/lib/python3/dist-packages/pychopper/scripts usr/lib/python3/dist-packages/pychopper/scripts/__init__.py usr/lib/python3/dist-packages/pychopper/scripts/pychopper usr/lib/python3/dist-packages/pychopper/scripts/pychopper.py usr/lib/python3/dist-packages/pychopper/seq_utils.py usr/lib/python3/dist-packages/pychopper/tests usr/lib/python3/dist-packages/pychopper/tests/__init__.py usr/lib/python3/dist-packages/pychopper/tests/data usr/lib/python3/dist-packages/pychopper/tests/data/PCS111_umi_test_reads.fastq.gz usr/lib/python3/dist-packages/pychopper/tests/data/PCS111_umi_test_reads_expected.fastq usr/lib/python3/dist-packages/pychopper/tests/data/barcodes.fas usr/lib/python3/dist-packages/pychopper/tests/data/expected_output.fas usr/lib/python3/dist-packages/pychopper/tests/data/ref.fas.gz usr/lib/python3/dist-packages/pychopper/tests/data/ref.fq.gz usr/lib/python3/dist-packages/pychopper/tests/test_detector.py usr/lib/python3/dist-packages/pychopper/tests/test_regression_simple.py usr/lib/python3/dist-packages/pychopper/utils.py usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info/PKG-INFO usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info/dependency_links.txt usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info/entry_points.txt usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info/not-zip-safe usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info/requires.txt usr/lib/python3/dist-packages/pychopper-2.7.10.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/python3-pychopper usr/share/doc/python3-pychopper/changelog.Debian.gz usr/share/doc/python3-pychopper/copyright usr/share/man usr/share/man/man1 usr/share/man/man1/pychopper.1.gz