r-bioc-dada2 (1.34.0+dfsg-2)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- r-bioc-dada2
- Architecture
- amd64v3
- Section
- universe/gnu-r
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 3.3 MB
- Size expected
- 2.8 MB
- Size actual
- 2.8 MB
- Size match
- match
Dependencies
Required package dependencies
- r-api-4.0
- r-api-bioc-3.20
- r-cran-rcpp (>= 0.12.0)
- r-bioc-biostrings (>= 2.42.1)
- r-cran-ggplot2 (>= 2.1.0)
- r-cran-reshape2 (>= 1.4.1)
- r-bioc-shortread (>= 1.32.0)
- r-cran-rcppparallel (>= 4.3.0)
- r-bioc-iranges (>= 2.6.0)
- r-bioc-xvector (>= 0.16.0)
- r-bioc-biocgenerics (>= 0.22.0)
- libc6 (>= 2.38)
- libgcc-s1 (>= 3.0)
- libstdc++6 (>= 14)
- libtbb12 (>= 2021.4.0)
Recommends
Recommended package dependencies
- None
Suggested packages
Recommended additional packages
Provides
Virtual packages provided
- None
Description
sample inference from amplicon sequencing data
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 638fcc48…11aee59c | match |
| SHA-1 | d9bb3a6a…436c4b23 | match |
| SHA-256 | eddda828…9e8a4a29 | match |
| SHA-512 | 6f2e7567…dc3b824e | match |
Contents
Files and directories included
. usr usr/lib usr/lib/R usr/lib/R/site-library usr/lib/R/site-library/dada2 usr/lib/R/site-library/dada2/CITATION usr/lib/R/site-library/dada2/DESCRIPTION usr/lib/R/site-library/dada2/INDEX usr/lib/R/site-library/dada2/Meta usr/lib/R/site-library/dada2/Meta/Rd.rds usr/lib/R/site-library/dada2/Meta/data.rds usr/lib/R/site-library/dada2/Meta/features.rds usr/lib/R/site-library/dada2/Meta/hsearch.rds usr/lib/R/site-library/dada2/Meta/links.rds usr/lib/R/site-library/dada2/Meta/nsInfo.rds usr/lib/R/site-library/dada2/Meta/package.rds usr/lib/R/site-library/dada2/Meta/vignette.rds usr/lib/R/site-library/dada2/NAMESPACE usr/lib/R/site-library/dada2/NEWS usr/lib/R/site-library/dada2/R usr/lib/R/site-library/dada2/R/dada2 usr/lib/R/site-library/dada2/R/dada2.rdb usr/lib/R/site-library/dada2/R/dada2.rdx usr/lib/R/site-library/dada2/data usr/lib/R/site-library/dada2/data/Rdata.rdb usr/lib/R/site-library/dada2/data/Rdata.rds usr/lib/R/site-library/dada2/data/Rdata.rdx usr/lib/R/site-library/dada2/doc usr/lib/R/site-library/dada2/doc/dada2-intro.R usr/lib/R/site-library/dada2/doc/dada2-intro.Rmd usr/lib/R/site-library/dada2/doc/index.html usr/lib/R/site-library/dada2/extdata usr/lib/R/site-library/dada2/extdata/example_seqs.fa usr/lib/R/site-library/dada2/extdata/example_species_assignment.fa.gz usr/lib/R/site-library/dada2/extdata/example_train_set.fa.gz usr/lib/R/site-library/dada2/extdata/phix_genome.fa usr/lib/R/site-library/dada2/extdata/sam1F.fastq.gz usr/lib/R/site-library/dada2/extdata/sam1R.fastq.gz usr/lib/R/site-library/dada2/extdata/sam2F.fastq.gz usr/lib/R/site-library/dada2/extdata/sam2R.fastq.gz usr/lib/R/site-library/dada2/extdata/samPB.fastq.gz usr/lib/R/site-library/dada2/extdata/samPBprimers.fastq.gz usr/lib/R/site-library/dada2/extdata/ten_16s.100.fa.gz usr/lib/R/site-library/dada2/help usr/lib/R/site-library/dada2/help/AnIndex usr/lib/R/site-library/dada2/help/aliases.rds usr/lib/R/site-library/dada2/help/dada2.rdb usr/lib/R/site-library/dada2/help/dada2.rdx usr/lib/R/site-library/dada2/help/paths.rds usr/lib/R/site-library/dada2/html usr/lib/R/site-library/dada2/html/00Index.html usr/lib/R/site-library/dada2/html/R.css usr/lib/R/site-library/dada2/include usr/lib/R/site-library/dada2/include/dada2.h usr/lib/R/site-library/dada2/include/dada2_RcppExports.h usr/lib/R/site-library/dada2/libs usr/lib/R/site-library/dada2/libs/dada2.so usr/share usr/share/doc usr/share/doc/r-bioc-dada2 usr/share/doc/r-bioc-dada2/changelog.Debian.gz usr/share/doc/r-bioc-dada2/copyright usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/r-bioc-dada2