ragout (2.3-5build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-resolute
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- resolute
- Component
- universe
- Source
- ragout
- Architecture
- amd64v3
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 9.9 MB
- Size expected
- 2.2 MB
- Size actual
- 2.2 MB
- Size match
- match
Dependencies
Required package dependencies
- libc6 (>= 2.38)
- libgcc-s1 (>= 3.3.1)
- libstdc++6 (>= 14)
- python3:any
- python3-networkx
- python3-six
Recommends
Recommended package dependencies
Suggested packages
Recommended additional packages
- None
Provides
Virtual packages provided
- None
Description
Reference-Assisted Genome Ordering UTility
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 3e046c80…7b2cda7f | match |
| SHA-1 | 14cf5082…46f39a02 | match |
| SHA-256 | ebea7837…885b8633 | match |
| SHA-512 | 09e8fc6d…7ac56958 | match |
Contents
Files and directories included
. usr usr/bin usr/bin/ragout usr/bin/ragout-maf2synteny usr/bin/ragout-overlap usr/lib usr/lib/python3 usr/lib/python3/dist-packages usr/lib/python3/dist-packages/ragout usr/lib/python3/dist-packages/ragout/__init__.py usr/lib/python3/dist-packages/ragout/__version__.py usr/lib/python3/dist-packages/ragout/assembly_graph usr/lib/python3/dist-packages/ragout/assembly_graph/__init__.py usr/lib/python3/dist-packages/ragout/assembly_graph/assembly_refine.py usr/lib/python3/dist-packages/ragout/breakpoint_graph usr/lib/python3/dist-packages/ragout/breakpoint_graph/__init__.py usr/lib/python3/dist-packages/ragout/breakpoint_graph/breakpoint_graph.py usr/lib/python3/dist-packages/ragout/breakpoint_graph/chimera_detector.py usr/lib/python3/dist-packages/ragout/breakpoint_graph/inferer.py usr/lib/python3/dist-packages/ragout/breakpoint_graph/permutation.py usr/lib/python3/dist-packages/ragout/breakpoint_graph/repeat_resolver.py usr/lib/python3/dist-packages/ragout/maf2synteny usr/lib/python3/dist-packages/ragout/maf2synteny/__init__.py usr/lib/python3/dist-packages/ragout/maf2synteny/maf2synteny.py usr/lib/python3/dist-packages/ragout/main.py usr/lib/python3/dist-packages/ragout/newick usr/lib/python3/dist-packages/ragout/newick/__init__.py usr/lib/python3/dist-packages/ragout/newick/lexer.py usr/lib/python3/dist-packages/ragout/newick/parser.py usr/lib/python3/dist-packages/ragout/newick/tokens.py usr/lib/python3/dist-packages/ragout/newick/tree.py usr/lib/python3/dist-packages/ragout/overlap usr/lib/python3/dist-packages/ragout/overlap/__init__.py usr/lib/python3/dist-packages/ragout/overlap/overlap.py usr/lib/python3/dist-packages/ragout/parsers usr/lib/python3/dist-packages/ragout/parsers/__init__.py usr/lib/python3/dist-packages/ragout/parsers/fasta_parser.py usr/lib/python3/dist-packages/ragout/parsers/phylogeny_parser.py usr/lib/python3/dist-packages/ragout/parsers/recipe_parser.py usr/lib/python3/dist-packages/ragout/phylogeny usr/lib/python3/dist-packages/ragout/phylogeny/__init__.py usr/lib/python3/dist-packages/ragout/phylogeny/inferer.py usr/lib/python3/dist-packages/ragout/phylogeny/phylogeny.py usr/lib/python3/dist-packages/ragout/scaffolder usr/lib/python3/dist-packages/ragout/scaffolder/__init__.py usr/lib/python3/dist-packages/ragout/scaffolder/merge_iters.py usr/lib/python3/dist-packages/ragout/scaffolder/output_generator.py usr/lib/python3/dist-packages/ragout/scaffolder/scaffolder.py usr/lib/python3/dist-packages/ragout/shared usr/lib/python3/dist-packages/ragout/shared/__init__.py usr/lib/python3/dist-packages/ragout/shared/config.py usr/lib/python3/dist-packages/ragout/shared/datatypes.py usr/lib/python3/dist-packages/ragout/shared/debug.py usr/lib/python3/dist-packages/ragout/shared/utils.py usr/lib/python3/dist-packages/ragout/synteny_backend usr/lib/python3/dist-packages/ragout/synteny_backend/__init__.py usr/lib/python3/dist-packages/ragout/synteny_backend/cactus.py usr/lib/python3/dist-packages/ragout/synteny_backend/hal.py usr/lib/python3/dist-packages/ragout/synteny_backend/maf.py usr/lib/python3/dist-packages/ragout/synteny_backend/sibelia.py usr/lib/python3/dist-packages/ragout/synteny_backend/synteny_backend.py usr/lib/python3/dist-packages/ragout/tests usr/lib/python3/dist-packages/ragout/tests/__init__.py usr/lib/python3/dist-packages/ragout/tests/data usr/lib/python3/dist-packages/ragout/tests/data/DH1.fasta usr/lib/python3/dist-packages/ragout/tests/data/ecoli.rcp usr/lib/python3/dist-packages/ragout/tests/data/mg1655.coords usr/lib/python3/dist-packages/ragout/tests/data/mg1655_contigs.fasta usr/lib/python3/dist-packages/ragout/tests/test_toy.py usr/lib/python3/dist-packages/ragout-2.3.egg-info usr/lib/python3/dist-packages/ragout-2.3.egg-info/PKG-INFO usr/lib/python3/dist-packages/ragout-2.3.egg-info/dependency_links.txt usr/lib/python3/dist-packages/ragout-2.3.egg-info/entry_points.txt usr/lib/python3/dist-packages/ragout-2.3.egg-info/top_level.txt usr/share usr/share/doc usr/share/doc/ragout usr/share/doc/ragout/changelog.Debian.gz usr/share/doc/ragout/copyright usr/share/man usr/share/man/man1 usr/share/man/man1/ragout-maf2synteny.1.gz usr/share/man/man1/ragout-overlap.1.gz usr/share/man/man1/ragout.1.gz