fasta3 (36.3.8i.14-Nov-2020-4build1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- multiverse
- Source
- none
- Architecture
- amd64v3
- Section
- multiverse/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 7.4 kB
- Size expected
- 1 MB
- Size actual
- 1 MB
- Size match
Suggested packages
Recommended additional packages
Description
tools for searching collections of biological sequences
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 9d538302…46618e4c | |
| SHA-1 | 52aaaa19…1e09ea69 | |
| SHA-256 | 36dc8919…29d00d69 | |
| SHA-512 | aec06d9a…f39c0ccd |
Contents
Files and directories included
. usr usr/bin usr/bin/fasta36 usr/bin/fastf36 usr/bin/fastm36 usr/bin/fasts36 usr/bin/fastx36 usr/bin/fasty36 usr/bin/ggsearch36 usr/bin/glsearch36 usr/bin/lalign36 usr/bin/map_db usr/bin/ssearch36 usr/bin/tfastf36 usr/bin/tfastm36 usr/bin/tfasts36 usr/bin/tfastx36 usr/bin/tfasty36 usr/share usr/share/doc usr/share/doc/fasta3 usr/share/doc/fasta3/changelog.Debian.gz usr/share/doc/fasta3/copyright usr/share/doc/fasta3/examples usr/share/doc/fasta3/examples/seq usr/share/doc/fasta3/examples/seq/bovgh.seq usr/share/doc/fasta3/examples/seq/bovprl.seq usr/share/doc/fasta3/examples/seq/dna_test_s.nlib usr/share/doc/fasta3/examples/seq/dyr_human.aa usr/share/doc/fasta3/examples/seq/egmsmg.aa usr/share/doc/fasta3/examples/seq/grou_drome.pseg usr/share/doc/fasta3/examples/seq/gst.nlib usr/share/doc/fasta3/examples/seq/gst.seq usr/share/doc/fasta3/examples/seq/gstm1_human.vaa usr/share/doc/fasta3/examples/seq/gstm1b_human.nt usr/share/doc/fasta3/examples/seq/gstm1b_human_fs.nt usr/share/doc/fasta3/examples/seq/gstt1_drome.aa usr/share/doc/fasta3/examples/seq/gtm1_human.aa usr/share/doc/fasta3/examples/seq/gtt1_drome.aa usr/share/doc/fasta3/examples/seq/h10_human.aa usr/share/doc/fasta3/examples/seq/hahu.aa usr/share/doc/fasta3/examples/seq/hsgstm1b.gcg usr/share/doc/fasta3/examples/seq/hsgstm1b.seq usr/share/doc/fasta3/examples/seq/humgstd.seq usr/share/doc/fasta3/examples/seq/lcbo.aa usr/share/doc/fasta3/examples/seq/m1r.aa usr/share/doc/fasta3/examples/seq/m2.aa usr/share/doc/fasta3/examples/seq/mchu.aa usr/share/doc/fasta3/examples/seq/mgstm1.3nt usr/share/doc/fasta3/examples/seq/mgstm1.aa usr/share/doc/fasta3/examples/seq/mgstm1.aaa usr/share/doc/fasta3/examples/seq/mgstm1.e05 usr/share/doc/fasta3/examples/seq/mgstm1.eeq usr/share/doc/fasta3/examples/seq/mgstm1.esq usr/share/doc/fasta3/examples/seq/mgstm1.gcg usr/share/doc/fasta3/examples/seq/mgstm1.lc usr/share/doc/fasta3/examples/seq/mgstm1.nt usr/share/doc/fasta3/examples/seq/mgstm1.nt1 usr/share/doc/fasta3/examples/seq/mgstm1.nt12r usr/share/doc/fasta3/examples/seq/mgstm1.nt13 usr/share/doc/fasta3/examples/seq/mgstm1.nt13r usr/share/doc/fasta3/examples/seq/mgstm1.nt1r usr/share/doc/fasta3/examples/seq/mgstm1.nts usr/share/doc/fasta3/examples/seq/mgstm1.raa usr/share/doc/fasta3/examples/seq/mgstm1.rev usr/share/doc/fasta3/examples/seq/mgstm1.seq usr/share/doc/fasta3/examples/seq/mgstm1_genclone.seq usr/share/doc/fasta3/examples/seq/mgtt2_x.seq usr/share/doc/fasta3/examples/seq/ms1.aa usr/share/doc/fasta3/examples/seq/mu.lib usr/share/doc/fasta3/examples/seq/musplfm.aa usr/share/doc/fasta3/examples/seq/mwkw.aa usr/share/doc/fasta3/examples/seq/mwrtc1.aa usr/share/doc/fasta3/examples/seq/myosin_bp.aa usr/share/doc/fasta3/examples/seq/n0.aa usr/share/doc/fasta3/examples/seq/n1.aa usr/share/doc/fasta3/examples/seq/n2.aa usr/share/doc/fasta3/examples/seq/n2_fs.lib usr/share/doc/fasta3/examples/seq/n2s.aa usr/share/doc/fasta3/examples/seq/n2t.aa usr/share/doc/fasta3/examples/seq/n_fs.lib usr/share/doc/fasta3/examples/seq/ngt.aa usr/share/doc/fasta3/examples/seq/ngts.aa usr/share/doc/fasta3/examples/seq/oohu.aa usr/share/doc/fasta3/examples/seq/oohu.raa usr/share/doc/fasta3/examples/seq/prio_atepa.aa usr/share/doc/fasta3/examples/seq/prot_test.lib usr/share/doc/fasta3/examples/seq/prot_test.lseg usr/share/doc/fasta3/examples/seq/prot_test_s.lseg usr/share/doc/fasta3/examples/seq/qrhuld.aa usr/share/doc/fasta3/examples/seq/titin_hum.aa usr/share/doc/fasta3/examples/seq/titin_hum.seq usr/share/doc/fasta3/examples/seq/vav_human.aa usr/share/doc/fasta3/examples/seq/xurt8c.aa usr/share/doc/fasta3/examples/seq/xurt8c.lc usr/share/doc/fasta3/examples/seq/xurtg.aa usr/share/doc/fasta3/examples/sql usr/share/doc/fasta3/examples/sql/README usr/share/doc/fasta3/examples/sql/create_seq_demo.sql usr/share/doc/fasta3/examples/sql/join_up50.pl usr/share/doc/fasta3/examples/sql/mysql_demo1.sql usr/share/doc/fasta3/examples/sql/mysql_demo_pv.sql usr/share/doc/fasta3/examples/sql/nr_to_sql.pl usr/share/doc/fasta3/examples/sql/pirpsd.sql usr/share/doc/fasta3/examples/sql/psql_demo.sql usr/share/doc/fasta3/examples/sql/psql_demo1.sql usr/share/doc/fasta3/examples/sql/psql_demo_pv.sql usr/share/fasta3 usr/share/fasta3/data usr/share/fasta3/data/VTML_10.mat usr/share/fasta3/data/VTML_120.mat usr/share/fasta3/data/VTML_160.mat usr/share/fasta3/data/VTML_20.mat usr/share/fasta3/data/VTML_200.mat usr/share/fasta3/data/VTML_40.mat usr/share/fasta3/data/VTML_80.mat usr/share/fasta3/data/blosum45.mat usr/share/fasta3/data/blosum50.mat usr/share/fasta3/data/blosum62.mat usr/share/fasta3/data/blosum80.mat usr/share/fasta3/data/dna.mat usr/share/fasta3/data/idn_aa.mat usr/share/fasta3/data/md_10.mat usr/share/fasta3/data/md_20.mat usr/share/fasta3/data/md_40.mat usr/share/fasta3/data/pam120.mat usr/share/fasta3/data/pam250.mat usr/share/fasta3/data/rna.mat usr/share/fasta3/data/vtml160.mat usr/share/fasta3/misc usr/share/fasta3/misc/README usr/share/fasta3/misc/parse_m9.pl usr/share/fasta3/misc/res2R.pl usr/share/fasta3/misc/shuffle_embed.pl usr/share/fasta3/scripts usr/share/fasta3/scripts/README usr/share/fasta3/scripts/README.scripts usr/share/fasta3/scripts/acc_examples usr/share/fasta3/scripts/ann_exons_all.pl usr/share/fasta3/scripts/ann_exons_ens.pl usr/share/fasta3/scripts/ann_exons_ncbi.pl usr/share/fasta3/scripts/ann_exons_up_sql.pl usr/share/fasta3/scripts/ann_exons_up_sql_www.pl usr/share/fasta3/scripts/ann_exons_up_www.pl usr/share/fasta3/scripts/ann_feats2ipr.pl usr/share/fasta3/scripts/ann_feats2ipr_e.pl usr/share/fasta3/scripts/ann_feats_up_sql.pl usr/share/fasta3/scripts/ann_feats_up_www2.pl usr/share/fasta3/scripts/ann_ipr_www.pl usr/share/fasta3/scripts/ann_pdb_cath.pl usr/share/fasta3/scripts/ann_pdb_vast.pl usr/share/fasta3/scripts/ann_pfam28.pl usr/share/fasta3/scripts/ann_pfam30_tmptbl.pl usr/share/fasta3/scripts/ann_pfam_sql.pl usr/share/fasta3/scripts/ann_pfam_sql.py usr/share/fasta3/scripts/ann_pfam_www.pl usr/share/fasta3/scripts/ann_pfam_www.py usr/share/fasta3/scripts/ann_script_list usr/share/fasta3/scripts/ann_upfeats_pfam_www_e.pl usr/share/fasta3/scripts/annot_blast_btop2.pl usr/share/fasta3/scripts/annot_blast_btop3.py usr/share/fasta3/scripts/annot_blast_btop4.py usr/share/fasta3/scripts/blastp_annot_cmd.sh usr/share/fasta3/scripts/blastp_cmd.sh usr/share/fasta3/scripts/color_defs.pl usr/share/fasta3/scripts/exp_up_ensg.pl usr/share/fasta3/scripts/expand_links.pl usr/share/fasta3/scripts/expand_refseq_isoforms.pl usr/share/fasta3/scripts/expand_uniref50.pl usr/share/fasta3/scripts/expand_up_isoforms.pl usr/share/fasta3/scripts/fasta_annot_cmd.sh usr/share/fasta3/scripts/get_genome_seq.py usr/share/fasta3/scripts/get_protein.py usr/share/fasta3/scripts/get_protein_sql.py usr/share/fasta3/scripts/get_protein_sql_www.py usr/share/fasta3/scripts/get_refseq.py usr/share/fasta3/scripts/get_uniprot.py usr/share/fasta3/scripts/get_up_prot_iso_sql.py usr/share/fasta3/scripts/lav2plt.pl usr/share/fasta3/scripts/lavplt_ps.pl usr/share/fasta3/scripts/lavplt_svg.pl usr/share/fasta3/scripts/links2sql.pl usr/share/fasta3/scripts/m8CBl_to_plot2.R usr/share/fasta3/scripts/m8_btop_msa.pl usr/share/fasta3/scripts/m9B_btop_msa.pl usr/share/fasta3/scripts/map_exon_coords.py usr/share/fasta3/scripts/merge_blast_btab.pl usr/share/fasta3/scripts/merge_fasta_btab.pl usr/share/fasta3/scripts/plot_domain2t.cgi usr/share/fasta3/scripts/relabel_domains.py usr/share/fasta3/scripts/rename_exons.py usr/share/fasta3/scripts/summ_domain_ident.pl usr/share/fasta3/scripts/test_ann_scripts.sh usr/share/fasta3/scripts/test_py.sh usr/share/man usr/share/man/man1 usr/share/man/man1/fasta36.1.gz usr/share/man/man1/fastf3.1.gz usr/share/man/man1/fasts3.1.gz usr/share/man/man1/map_db.1.gz usr/share/man/man1/prss3.1.gz usr/share/man/man1/ps_lav.1.gz