bio-tradis (1.4.5+dfsg2-2build1)

Details

Core information at a glance

Distribution: ubuntu
Origin: ubuntu-stonking
Repository: https://nl.archive.ubuntu.com/ubuntu
Codename: stonking
Component: universe
Source: none
Architecture: amd64
Section: universe/perl
Priority: optional
Maintainer: Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size: 241 B
Size expected: 78.2 kB
Size actual: 78.2 kB
Size match

Dependencies

Required package dependencies

perl:any
libbio-perl-perl
libexception-class-perl
libmoose-perl
libtext-csv-perl
libtry-tiny-perl
smalt
samtools
tabix
r-base-core
r-cran-getopt
r-cran-mass

Suggested packages

Recommended additional packages

None

Description

analyse the output from TraDIS analyses of genomic sequences

Homepage Download .deb

Checksums

Hash values and integrity verification status

Type	Expected	Actual
MD5	0030f110…b00a3f60	0030f110…b00a3f60
SHA-1	79eb8303…95b37140	79eb8303…95b37140
SHA-256	75d772b5…728e5102	75d772b5…728e5102
SHA-512	314ad825…ac08ccba	314ad825…ac08ccba

Files and directories included

.
usr
usr/bin
usr/bin/add_tradis_tags
usr/bin/bacteria_tradis
usr/bin/check_tradis_tags
usr/bin/combine_tradis_plots
usr/bin/filter_tradis_tags
usr/bin/remove_tradis_tags
usr/bin/tradis_comparison
usr/bin/tradis_essentiality
usr/bin/tradis_gene_insert_sites
usr/bin/tradis_merge_plots
usr/bin/tradis_plot
usr/share
usr/share/doc
usr/share/doc/bio-tradis
usr/share/doc/bio-tradis/README.Debian
usr/share/doc/bio-tradis/README.md.gz
usr/share/doc/bio-tradis/changelog.Debian.gz
usr/share/doc/bio-tradis/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/add_tradis_tags.1p.gz
usr/share/man/man1/bacteria_tradis.1p.gz
usr/share/man/man1/check_tradis_tags.1p.gz
usr/share/man/man1/combine_tradis_plots.1p.gz
usr/share/man/man1/filter_tradis_tags.1p.gz
usr/share/man/man1/remove_tradis_tags.1p.gz
usr/share/man/man1/tradis_comparison.1.gz
usr/share/man/man1/tradis_essentiality.1.gz
usr/share/man/man1/tradis_gene_insert_sites.1p.gz
usr/share/man/man1/tradis_merge_plots.1.gz
usr/share/man/man1/tradis_plot.1p.gz
usr/share/man/man3
usr/share/man/man3/Bio::Tradis.3pm.gz
usr/share/man/man3/Bio::Tradis::AddTagsToSeq.3pm.gz
usr/share/man/man3/Bio::Tradis::Analysis::Exceptions.3pm.gz
usr/share/man/man3/Bio::Tradis::Analysis::InsertSite.3pm.gz
usr/share/man/man3/Bio::Tradis::CombinePlots.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::AddTags.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::CheckTags.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::FilterFastqTags.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::PlotCombine.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::PlotTradis.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::RemoveFastqTags.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::RunMapping.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::TradisAnalysis.3pm.gz
usr/share/man/man3/Bio::Tradis::CommandLine::TradisBam.3pm.gz
usr/share/man/man3/Bio::Tradis::DetectTags.3pm.gz
usr/share/man/man3/Bio::Tradis::Exception.3pm.gz
usr/share/man/man3/Bio::Tradis::FilterTags.3pm.gz
usr/share/man/man3/Bio::Tradis::Map.3pm.gz
usr/share/man/man3/Bio::Tradis::Parser::Bam.3pm.gz
usr/share/man/man3/Bio::Tradis::Parser::Cigar.3pm.gz
usr/share/man/man3/Bio::Tradis::Parser::Fastq.3pm.gz
usr/share/man/man3/Bio::Tradis::RemoveTags.3pm.gz
usr/share/man/man3/Bio::Tradis::RunTradis.3pm.gz
usr/share/man/man3/Bio::Tradis::Samtools.3pm.gz
usr/share/man/man3/Bio::Tradis::TradisPlot.3pm.gz
usr/share/perl5
usr/share/perl5/Bio
usr/share/perl5/Bio/Tradis
usr/share/perl5/Bio/Tradis/AddTagsToSeq.pm
usr/share/perl5/Bio/Tradis/Analysis
usr/share/perl5/Bio/Tradis/Analysis/Exceptions.pm
usr/share/perl5/Bio/Tradis/Analysis/InsertSite.pm
usr/share/perl5/Bio/Tradis/CombinePlots.pm
usr/share/perl5/Bio/Tradis/CommandLine
usr/share/perl5/Bio/Tradis/CommandLine/AddTags.pm
usr/share/perl5/Bio/Tradis/CommandLine/CheckTags.pm
usr/share/perl5/Bio/Tradis/CommandLine/FilterFastqTags.pm
usr/share/perl5/Bio/Tradis/CommandLine/PlotCombine.pm
usr/share/perl5/Bio/Tradis/CommandLine/PlotTradis.pm
usr/share/perl5/Bio/Tradis/CommandLine/RemoveFastqTags.pm
usr/share/perl5/Bio/Tradis/CommandLine/RunMapping.pm
usr/share/perl5/Bio/Tradis/CommandLine/TradisAnalysis.pm
usr/share/perl5/Bio/Tradis/CommandLine/TradisBam.pm
usr/share/perl5/Bio/Tradis/DetectTags.pm
usr/share/perl5/Bio/Tradis/Exception.pm
usr/share/perl5/Bio/Tradis/FilterTags.pm
usr/share/perl5/Bio/Tradis/Map.pm
usr/share/perl5/Bio/Tradis/Parser
usr/share/perl5/Bio/Tradis/Parser/Bam.pm
usr/share/perl5/Bio/Tradis/Parser/Cigar.pm
usr/share/perl5/Bio/Tradis/Parser/Fastq.pm
usr/share/perl5/Bio/Tradis/RemoveTags.pm
usr/share/perl5/Bio/Tradis/RunTradis.pm
usr/share/perl5/Bio/Tradis/Samtools.pm
usr/share/perl5/Bio/Tradis/TradisPlot.pm
usr/share/perl5/Bio/Tradis.pm