bitseq (0.7.5+dfsg2-1)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
1.6 kB
Size expected
386.8 kB
Size actual
386.8 kB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.3.1)
  • libgomp1 (>= 6)
  • libstdc++6 (>= 9)
  • zlib1g (>= 1:1.2.3.3)
  • python3
  • python3-numpy

Suggested packages

Recommended additional packages

  • samtools

Description

Bayesian Inference of Transcripts from Sequencing Data

Homepage Download .deb

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD51b3fcf90…46e9e913
SHA-1a6c0d630…1d4f2b4c
SHA-2561c7536ec…f0b3a491
SHA-512f2f931d2…ad2727f0

Contents

Files and directories included

.
usr
usr/bin
usr/bin/convertSamples
usr/bin/estimateDE
usr/bin/estimateExpression
usr/bin/estimateHyperPar
usr/bin/estimateVBExpression
usr/bin/extractSamples
usr/bin/getFoldChange
usr/bin/getGeneExpression
usr/bin/getPPLR
usr/bin/getVariance
usr/bin/getWithinGeneExpression
usr/bin/parseAlignment
usr/bin/transposeLargeFile
usr/lib
usr/lib/debian-med
usr/lib/debian-med/bin
usr/lib/debian-med/bin/biocUpdate.sh
usr/lib/debian-med/bin/checkTR.py
usr/lib/debian-med/bin/extractTranscriptInfo.py
usr/lib/debian-med/bin/getCounts.py
usr/lib/debian-med/bin/parseAlignment.py
usr/share
usr/share/doc
usr/share/doc/bitseq
usr/share/doc/bitseq/README.Debian
usr/share/doc/bitseq/changelog.Debian.gz
usr/share/doc/bitseq/copyright
usr/share/man
usr/share/man/man1
usr/share/man/man1/convertSamples.1.gz
usr/share/man/man1/estimateDE.1.gz
usr/share/man/man1/estimateExpression.1.gz
usr/share/man/man1/estimateHyperPar.1.gz
usr/share/man/man1/estimateVBExpression.1.gz
usr/share/man/man1/extractSamples.1.gz
usr/share/man/man1/extractTranscriptInfo.1.gz
usr/share/man/man1/getCounts.1.gz
usr/share/man/man1/getFoldChange.1.gz
usr/share/man/man1/getGeneExpression.1.gz
usr/share/man/man1/getPPLR.1.gz
usr/share/man/man1/getVariance.1.gz
usr/share/man/man1/getWithinGeneExpression.1.gz
usr/share/man/man1/parseAlignment.1.gz
usr/share/man/man1/transposeLargeFile.1.gz
usr/bin/biocUpdate
usr/bin/checkTR
usr/bin/extractTranscriptInfo
usr/bin/getCounts