bppsuite-examples (2.4.1-8)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- bppsuite
- Architecture
- amd64
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 368 B
- Size expected
- 227.3 kB
- Size actual
- 227.3 kB
- Size match
Dependencies
Required package dependencies
- None
Suggested packages
Recommended additional packages
- None
Description
Examples for Bio++ program suite
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 2ec970c7…e9d38f00 | |
| SHA-1 | 0c60ed08…41ec2d4d | |
| SHA-256 | 781c9c53…e38aeb5f | |
| SHA-512 | aa588181…11543598 |
Contents
Files and directories included
. usr usr/share usr/share/doc usr/share/doc/bppsuite usr/share/doc/bppsuite/examples usr/share/doc/bppsuite/examples/AlignmentScoring usr/share/doc/bppsuite/examples/AlignmentScoring/AlnScores.bpp usr/share/doc/bppsuite/examples/ConsensusTree usr/share/doc/bppsuite/examples/ConsensusTree/Consense.bpp usr/share/doc/bppsuite/examples/Data usr/share/doc/bppsuite/examples/Data/HIV1_REF_2010_gag_DNA.fasta.gz usr/share/doc/bppsuite/examples/Data/HIV1_REF_2010_gag_macse_AA.fasta.gz usr/share/doc/bppsuite/examples/Data/HIV1_REF_2010_gag_macse_DNA.fasta.gz usr/share/doc/bppsuite/examples/Data/LSU.dnd usr/share/doc/bppsuite/examples/Data/LSU.phy.gz usr/share/doc/bppsuite/examples/Data/LSUrooted.dnd.gz usr/share/doc/bppsuite/examples/Data/Myo.dnd usr/share/doc/bppsuite/examples/Data/Myo.mase.gz usr/share/doc/bppsuite/examples/Data/OutGroup.txt usr/share/doc/bppsuite/examples/Data/lysozymeLarge.dnd usr/share/doc/bppsuite/examples/Data/lysozymeLarge.fasta.gz usr/share/doc/bppsuite/examples/Data/treeList.dnd.gz usr/share/doc/bppsuite/examples/Data/treeList2.dnd usr/share/doc/bppsuite/examples/Distance usr/share/doc/bppsuite/examples/Distance/Dist.bpp usr/share/doc/bppsuite/examples/Drawing usr/share/doc/bppsuite/examples/Drawing/TreeDraw.bpp usr/share/doc/bppsuite/examples/MaximumLikelihood usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/BranchModel usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/BranchModel/ML.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/CladeModel usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/CladeModel/ML.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M0 usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M0/ML.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M1 usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M1/ML.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M2 usr/share/doc/bppsuite/examples/MaximumLikelihood/Codons/M2/ML.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/Homogeneous usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/Homogeneous/Ancestor.bpp usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/Homogeneous/ML.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGG usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGG/MLNHGG.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/Ancestor.bpp usr/share/doc/bppsuite/examples/MaximumLikelihood/Nucleotides/NonHomogeneousGeneral/MLNH.bpp.gz usr/share/doc/bppsuite/examples/MaximumLikelihood/Proteins usr/share/doc/bppsuite/examples/MaximumLikelihood/Proteins/Homogeneous usr/share/doc/bppsuite/examples/MaximumLikelihood/Proteins/Homogeneous/Ancestor.bpp usr/share/doc/bppsuite/examples/MaximumLikelihood/Proteins/Homogeneous/ML.bpp.gz usr/share/doc/bppsuite/examples/Parsimony usr/share/doc/bppsuite/examples/Parsimony/Pars.bpp usr/share/doc/bppsuite/examples/PopStats usr/share/doc/bppsuite/examples/PopStats/PopStats.bpp usr/share/doc/bppsuite/examples/PopStats/PopStatsCodonSites.bpp usr/share/doc/bppsuite/examples/PopStats/alignment.phy usr/share/doc/bppsuite/examples/README usr/share/doc/bppsuite/examples/ReRooting usr/share/doc/bppsuite/examples/ReRooting/ReRoot.bpp usr/share/doc/bppsuite/examples/SequenceManipulation usr/share/doc/bppsuite/examples/SequenceManipulation/SeqMan.bpp usr/share/doc/bppsuite/examples/SequenceManipulation/SeqMan2.bpp usr/share/doc/bppsuite/examples/SequenceSimulation usr/share/doc/bppsuite/examples/SequenceSimulation/Homogeneous usr/share/doc/bppsuite/examples/SequenceSimulation/Homogeneous/SeqGen.bpp usr/share/doc/bppsuite/examples/SequenceSimulation/HomogeneousCovarion usr/share/doc/bppsuite/examples/SequenceSimulation/HomogeneousCovarion/SeqGen.bpp usr/share/doc/bppsuite/examples/SequenceSimulation/NonHomogeneous usr/share/doc/bppsuite/examples/SequenceSimulation/NonHomogeneous/SeqGen.bpp usr/share/doc/bppsuite/examples/SequenceSimulation/WithSiteSpecificSettings usr/share/doc/bppsuite/examples/SequenceSimulation/WithSiteSpecificSettings/SeqGen.bpp usr/share/doc/bppsuite/examples/SequenceSimulation/WithSiteSpecificSettings/infos.csv usr/share/doc/bppsuite/examples/control usr/share/doc/bppsuite/examples/ref usr/share/doc/bppsuite/examples/ref/HIV1_REF_2010_gag.scores.txt.gz usr/share/doc/bppsuite/examples/ref/Homogeneous-LSUSim.fasta.gz usr/share/doc/bppsuite/examples/ref/HomogeneousCovarion-LSUSim.fasta.gz usr/share/doc/bppsuite/examples/ref/LSU.ML.dnd usr/share/doc/bppsuite/examples/ref/Myo.ML.dnd usr/share/doc/bppsuite/examples/ref/NonHomogeneous-LSUSim.fasta.gz usr/share/doc/bppsuite/examples/ref/README.test_data usr/share/doc/bppsuite/examples/ref/WithSiteSpecificSettings-LSUSim.fasta usr/share/doc/bppsuite/examples/ref/branch-lysozymeLarge.ML.dnd usr/share/doc/bppsuite/examples/ref/clade-lysozymeLarge.ML.dnd usr/share/doc/bppsuite/examples/ref/dist-LSU.mat.gz usr/share/doc/bppsuite/examples/ref/m0-lysozymeLarge.ML.dnd usr/share/doc/bppsuite/examples/ref/popstats-alignment.codons.csv usr/share/doc/bppsuite/examples/ref/seqman-LSU.fas.gz usr/share/doc/bppsuite/examples/ref/treeList2_rooted.dnd usr/share/doc/bppsuite/examples/ref/treedraw-LSU.svg usr/share/doc/bppsuite/examples/run-unit-test usr/share/doc/bppsuite/examples/tree.dnd usr/share/doc/bppsuite-examples usr/share/doc/bppsuite-examples/changelog.Debian.gz usr/share/doc/bppsuite-examples/copyright