fsa (1.15.9+dfsg-6build1)

Details

Core information at a glance

Distribution
ubuntu
Origin
ubuntu-stonking
Repository
https://nl.archive.ubuntu.com/ubuntu
Codename
stonking
Component
universe
Source
none
Architecture
amd64
Section
universe/science
Priority
optional
Maintainer
Ubuntu Developers <[email protected]>

Size & integrity

Byte sizes and integrity verification

Installed size
2.8 kB
Size expected
691.2 kB
Size actual
691.2 kB
Size match

Dependencies

Required package dependencies

  • libc6 (>= 2.38)
  • libgcc-s1 (>= 3.3.1)
  • libstdc++6 (>= 13.1)
  • mummer
  • exonerate

Suggested packages

Recommended additional packages

  • None

Description

Fast Statistical Alignment of protein, RNA or DNA sequences

Tags

Package classification tags

None

Checksums

Hash values and integrity verification status

TypeActualMatch
MD5cffef14e…e255f63c
SHA-1b3afaef2…361aaff2
SHA-256b137ee0e…d73ecb93
SHA-51237593a66…d015d0d5

Contents

Files and directories included

.
usr
usr/bin
usr/bin/fsa
usr/bin/fsa-translate
usr/bin/gapcleaner
usr/bin/isect_mercator_alignment_gff
usr/bin/map_coords
usr/bin/map_gff_coords
usr/bin/percentid
usr/bin/prot2codon
usr/bin/slice_fasta
usr/bin/slice_fasta_gff
usr/bin/slice_mercator_alignment
usr/lib
usr/lib/debian-med
usr/lib/debian-med/bin
usr/lib/debian-med/share
usr/lib/debian-med/share/man
usr/lib/debian-med/share/man/man1
usr/share
usr/share/doc
usr/share/doc/fsa
usr/share/doc/fsa/FAQ.html
usr/share/doc/fsa/README.gz
usr/share/doc/fsa/changelog.Debian.gz
usr/share/doc/fsa/copyright
usr/share/doc/fsa/examples
usr/share/doc/fsa/examples/README
usr/share/doc/fsa/examples/RV12.BBS12030.fasta
usr/share/doc/fsa/examples/RV12.BBS12030.fasta.gui
usr/share/doc/fsa/examples/RV12.BBS12030.fasta.probs
usr/share/doc/fsa/examples/RV12.BBS12030.mfa
usr/share/doc/fsa/examples/RV12.BBS12030.reference.mfa
usr/share/doc/fsa/examples/RV12.BBS12030.reference.stock
usr/share/doc/fsa/examples/RV12.BBS12030.stock
usr/share/doc/fsa/examples/U5.aln1.fasta
usr/share/doc/fsa/examples/U5.aln1.fasta.gui
usr/share/doc/fsa/examples/U5.aln1.fasta.probs
usr/share/doc/fsa/examples/U5.aln1.mfa
usr/share/doc/fsa/examples/U5.aln1.reference.mfa
usr/share/doc/fsa/examples/U5.aln1.reference.stock
usr/share/doc/fsa/examples/U5.aln1.stock
usr/share/doc/fsa/examples/tRNA.aln1.fasta
usr/share/doc/fsa/examples/tRNA.aln1.fasta.gui
usr/share/doc/fsa/examples/tRNA.aln1.fasta.probs
usr/share/doc/fsa/examples/tRNA.aln1.mfa
usr/share/doc/fsa/examples/tRNA.aln1.reference.mfa
usr/share/doc/fsa/examples/tRNA.aln1.reference.stock
usr/share/doc/fsa/examples/tRNA.aln1.stock
usr/share/doc/fsa/pretty.css
usr/share/man
usr/share/man/man1
usr/share/man/man1/fsa-translate.1.gz
usr/share/man/man1/fsa.1.gz
usr/share/man/man1/gapcleaner.1.gz
usr/share/man/man1/isect_mercator_alignment_gff.1.gz
usr/share/man/man1/map_coords.1.gz
usr/share/man/man1/map_gff_coords.1.gz
usr/share/man/man1/percentid.1.gz
usr/share/man/man1/prot2codon.1.gz
usr/share/man/man1/slice_fasta.1.gz
usr/share/man/man1/slice_fasta_gff.1.gz
usr/share/man/man1/slice_mercator_alignment.1.gz
usr/lib/debian-med/bin/translate
usr/lib/debian-med/share/man/man1/translate.1.gz