gmap (2025-07-31+ds-1)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64
- Section
- universe/science
- Priority
- optional
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 245.6 kB
- Size expected
- 32.2 MB
- Size actual
- 32.2 MB
- Size match
Suggested packages
Recommended additional packages
- None
Description
spliced and SNP-tolerant alignment for mRNA and short reads
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 76962a4d…897c3e66 | |
| SHA-1 | 24eedeca…ddcf53d4 | |
| SHA-256 | ac6f5112…f80986f1 | |
| SHA-512 | 1684b1d9…91522bbb |
Contents
Files and directories included
. usr usr/bin usr/lib usr/lib/gmap usr/lib/gmap/atoiindex usr/lib/gmap/cmetindex usr/lib/gmap/cpuid usr/lib/gmap/dbsnp_iit usr/lib/gmap/ensembl_genes usr/lib/gmap/fa_coords usr/lib/gmap/get-genome usr/lib/gmap/gff3_exons usr/lib/gmap/gff3_genes usr/lib/gmap/gff3_introns usr/lib/gmap/gff3_splicesites usr/lib/gmap/gmap usr/lib/gmap/gmap.avx2 usr/lib/gmap/gmap.avx512 usr/lib/gmap/gmap.nosimd usr/lib/gmap/gmap.sse2 usr/lib/gmap/gmap.sse41 usr/lib/gmap/gmap.sse42 usr/lib/gmap/gmap.ssse3 usr/lib/gmap/gmap_build usr/lib/gmap/gmap_cat usr/lib/gmap/gmap_process usr/lib/gmap/gmapindex usr/lib/gmap/gmapl usr/lib/gmap/gmapl.avx2 usr/lib/gmap/gmapl.avx512 usr/lib/gmap/gmapl.nosimd usr/lib/gmap/gmapl.sse2 usr/lib/gmap/gmapl.sse41 usr/lib/gmap/gmapl.sse42 usr/lib/gmap/gmapl.ssse3 usr/lib/gmap/gsnap usr/lib/gmap/gsnap.avx2 usr/lib/gmap/gsnap.avx512 usr/lib/gmap/gsnap.nosimd usr/lib/gmap/gsnap.sse2 usr/lib/gmap/gsnap.sse41 usr/lib/gmap/gsnap.sse42 usr/lib/gmap/gsnap.ssse3 usr/lib/gmap/gsnapl usr/lib/gmap/gsnapl.avx2 usr/lib/gmap/gsnapl.avx512 usr/lib/gmap/gsnapl.nosimd usr/lib/gmap/gsnapl.sse2 usr/lib/gmap/gsnapl.sse41 usr/lib/gmap/gsnapl.sse42 usr/lib/gmap/gsnapl.ssse3 usr/lib/gmap/gtf_exons usr/lib/gmap/gtf_genes usr/lib/gmap/gtf_introns usr/lib/gmap/gtf_splicesites usr/lib/gmap/gtf_transcript_splicesites usr/lib/gmap/gvf_iit usr/lib/gmap/iit_dump usr/lib/gmap/iit_get usr/lib/gmap/iit_store usr/lib/gmap/indexdb_cat usr/lib/gmap/md_coords usr/lib/gmap/psl_genes usr/lib/gmap/psl_introns usr/lib/gmap/psl_splicesites usr/lib/gmap/snpindex usr/lib/gmap/trindex usr/lib/gmap/vcf_iit usr/share usr/share/doc usr/share/doc/gmap usr/share/doc/gmap/NOTICE usr/share/doc/gmap/README.Debian usr/share/doc/gmap/README.gz usr/share/doc/gmap/changelog.Debian.gz usr/share/doc/gmap/copyright usr/share/doc/gmap/examples usr/share/doc/gmap/examples/tests.tar.xz usr/share/lintian usr/share/lintian/overrides usr/share/lintian/overrides/gmap usr/share/man usr/share/man/man1 usr/share/man/man1/gmap.1.gz usr/share/man/man1/gmap_build.1.gz usr/share/man/man1/gmapl.1.gz usr/share/man/man1/gsnap.1.gz usr/share/man/man1/gsnapl.1.gz var var/cache var/cache/gmap usr/bin/gmap usr/bin/gmap.avx2 usr/bin/gmap.avx512 usr/bin/gmap.nosimd usr/bin/gmap.sse2 usr/bin/gmap.sse41 usr/bin/gmap.sse42 usr/bin/gmap.ssse3 usr/bin/gmap_build usr/bin/gmapl usr/bin/gmapl.avx2 usr/bin/gmapl.avx512 usr/bin/gmapl.nosimd usr/bin/gmapl.sse2 usr/bin/gmapl.sse41 usr/bin/gmapl.sse42 usr/bin/gmapl.ssse3 usr/bin/gsnap usr/bin/gsnap.avx2 usr/bin/gsnap.avx512 usr/bin/gsnap.nosimd usr/bin/gsnap.sse2 usr/bin/gsnap.sse41 usr/bin/gsnap.sse42 usr/bin/gsnap.ssse3 usr/bin/gsnapl usr/bin/gsnapl.avx2 usr/bin/gsnapl.avx512 usr/bin/gsnapl.nosimd usr/bin/gsnapl.sse2 usr/bin/gsnapl.sse41 usr/bin/gsnapl.sse42 usr/bin/gsnapl.ssse3