hhsuite (3.3.0+ds-10)
Details
Core information at a glance
- Distribution
- ubuntu
- Origin
- ubuntu-stonking
- Repository
- https://nl.archive.ubuntu.com/ubuntu
- Codename
- stonking
- Component
- universe
- Source
- none
- Architecture
- amd64
- Section
- universe/science
- Priority
- extra
- Maintainer
- Ubuntu Developers <[email protected]>
Size & integrity
Byte sizes and integrity verification
- Installed size
- 448.9 kB
- Size expected
- 13.5 MB
- Size actual
- 13.5 MB
- Size match
Dependencies
Required package dependencies
Suggested packages
Recommended additional packages
- None
Description
sensitive protein sequence searching based on HMM-HMM alignment
Tags
Package classification tags
None
Checksums
Hash values and integrity verification status
| Type | Actual | Match |
|---|---|---|
| MD5 | 40f105c5…ecc06ac1 | |
| SHA-1 | 6369274d…5c1daf7c | |
| SHA-256 | 2429933d…3306f1a0 | |
| SHA-512 | 6854aa8f…ffd3c07b |
Contents
Files and directories included
. usr usr/bin usr/bin/ffindex_apply usr/bin/ffindex_build usr/bin/ffindex_from_fasta usr/bin/ffindex_from_fasta_with_split usr/bin/ffindex_get usr/bin/ffindex_modify usr/bin/ffindex_order usr/bin/ffindex_reduce usr/bin/ffindex_unpack usr/lib usr/lib/hhsuite usr/lib/hhsuite/data usr/lib/hhsuite/data/do_not_delete usr/lib/hhsuite/data/do_not_delete.phr usr/lib/hhsuite/data/do_not_delete.pin usr/lib/hhsuite/data/do_not_delete.psq usr/libexec usr/libexec/hhsuite usr/libexec/hhsuite/a3m_database_extract-avx usr/libexec/hhsuite/a3m_database_extract-avx2 usr/libexec/hhsuite/a3m_database_extract-plain usr/libexec/hhsuite/a3m_database_extract-sse3 usr/libexec/hhsuite/a3m_database_extract-sse4.1 usr/libexec/hhsuite/a3m_database_extract-ssse3 usr/libexec/hhsuite/a3m_database_filter-avx usr/libexec/hhsuite/a3m_database_filter-avx2 usr/libexec/hhsuite/a3m_database_filter-plain usr/libexec/hhsuite/a3m_database_filter-sse3 usr/libexec/hhsuite/a3m_database_filter-sse4.1 usr/libexec/hhsuite/a3m_database_filter-ssse3 usr/libexec/hhsuite/a3m_database_reduce-avx usr/libexec/hhsuite/a3m_database_reduce-avx2 usr/libexec/hhsuite/a3m_database_reduce-plain usr/libexec/hhsuite/a3m_database_reduce-sse3 usr/libexec/hhsuite/a3m_database_reduce-sse4.1 usr/libexec/hhsuite/a3m_database_reduce-ssse3 usr/libexec/hhsuite/a3m_extract-avx usr/libexec/hhsuite/a3m_extract-avx2 usr/libexec/hhsuite/a3m_extract-plain usr/libexec/hhsuite/a3m_extract-sse3 usr/libexec/hhsuite/a3m_extract-sse4.1 usr/libexec/hhsuite/a3m_extract-ssse3 usr/libexec/hhsuite/a3m_reduce-avx usr/libexec/hhsuite/a3m_reduce-avx2 usr/libexec/hhsuite/a3m_reduce-plain usr/libexec/hhsuite/a3m_reduce-sse3 usr/libexec/hhsuite/a3m_reduce-sse4.1 usr/libexec/hhsuite/a3m_reduce-ssse3 usr/libexec/hhsuite/bin usr/libexec/hhsuite/cstranslate-avx usr/libexec/hhsuite/cstranslate-avx2 usr/libexec/hhsuite/cstranslate-plain usr/libexec/hhsuite/cstranslate-sse3 usr/libexec/hhsuite/cstranslate-sse4.1 usr/libexec/hhsuite/cstranslate-ssse3 usr/libexec/hhsuite/hhalign-avx usr/libexec/hhsuite/hhalign-avx2 usr/libexec/hhsuite/hhalign-plain usr/libexec/hhsuite/hhalign-sse3 usr/libexec/hhsuite/hhalign-sse4.1 usr/libexec/hhsuite/hhalign-ssse3 usr/libexec/hhsuite/hhalign_omp-avx usr/libexec/hhsuite/hhalign_omp-avx2 usr/libexec/hhsuite/hhalign_omp-plain usr/libexec/hhsuite/hhalign_omp-sse3 usr/libexec/hhsuite/hhalign_omp-sse4.1 usr/libexec/hhsuite/hhalign_omp-ssse3 usr/libexec/hhsuite/hhblits-avx usr/libexec/hhsuite/hhblits-avx2 usr/libexec/hhsuite/hhblits-plain usr/libexec/hhsuite/hhblits-sse3 usr/libexec/hhsuite/hhblits-sse4.1 usr/libexec/hhsuite/hhblits-ssse3 usr/libexec/hhsuite/hhblits_ca3m-avx usr/libexec/hhsuite/hhblits_ca3m-avx2 usr/libexec/hhsuite/hhblits_ca3m-plain usr/libexec/hhsuite/hhblits_ca3m-sse3 usr/libexec/hhsuite/hhblits_ca3m-sse4.1 usr/libexec/hhsuite/hhblits_ca3m-ssse3 usr/libexec/hhsuite/hhblits_omp-avx usr/libexec/hhsuite/hhblits_omp-avx2 usr/libexec/hhsuite/hhblits_omp-plain usr/libexec/hhsuite/hhblits_omp-sse3 usr/libexec/hhsuite/hhblits_omp-sse4.1 usr/libexec/hhsuite/hhblits_omp-ssse3 usr/libexec/hhsuite/hhconsensus-avx usr/libexec/hhsuite/hhconsensus-avx2 usr/libexec/hhsuite/hhconsensus-plain usr/libexec/hhsuite/hhconsensus-sse3 usr/libexec/hhsuite/hhconsensus-sse4.1 usr/libexec/hhsuite/hhconsensus-ssse3 usr/libexec/hhsuite/hhfilter-avx usr/libexec/hhsuite/hhfilter-avx2 usr/libexec/hhsuite/hhfilter-plain usr/libexec/hhsuite/hhfilter-sse3 usr/libexec/hhsuite/hhfilter-sse4.1 usr/libexec/hhsuite/hhfilter-ssse3 usr/libexec/hhsuite/hhmake-avx usr/libexec/hhsuite/hhmake-avx2 usr/libexec/hhsuite/hhmake-plain usr/libexec/hhsuite/hhmake-sse3 usr/libexec/hhsuite/hhmake-sse4.1 usr/libexec/hhsuite/hhmake-ssse3 usr/libexec/hhsuite/hhsearch-avx usr/libexec/hhsuite/hhsearch-avx2 usr/libexec/hhsuite/hhsearch-plain usr/libexec/hhsuite/hhsearch-sse3 usr/libexec/hhsuite/hhsearch-sse4.1 usr/libexec/hhsuite/hhsearch-ssse3 usr/libexec/hhsuite/hhsearch_omp-avx usr/libexec/hhsuite/hhsearch_omp-avx2 usr/libexec/hhsuite/hhsearch_omp-plain usr/libexec/hhsuite/hhsearch_omp-sse3 usr/libexec/hhsuite/hhsearch_omp-sse4.1 usr/libexec/hhsuite/hhsearch_omp-ssse3 usr/libexec/hhsuite/simd-dispatch usr/share usr/share/doc usr/share/doc/hhsuite usr/share/doc/hhsuite/README.md.gz usr/share/doc/hhsuite/changelog.Debian.gz usr/share/doc/hhsuite/copyright usr/share/doc/hhsuite/examples usr/share/doc/hhsuite/examples/query.a3m usr/share/doc/hhsuite/examples/query.hhm usr/share/doc/hhsuite/examples/query.hhr usr/share/doc/hhsuite/examples/query.seq usr/share/hhsuite usr/share/hhsuite/scripts usr/share/hhsuite/scripts/Align.pm usr/share/hhsuite/scripts/HHPaths.pm usr/share/hhsuite/scripts/a3m.py usr/share/hhsuite/scripts/addss.pl usr/share/hhsuite/scripts/check_a3m.py usr/share/hhsuite/scripts/cif2fasta.py usr/share/hhsuite/scripts/create_profile_from_hhm.pl usr/share/hhsuite/scripts/create_profile_from_hmmer.pl usr/share/hhsuite/scripts/ffindex.py usr/share/hhsuite/scripts/get_a3m_size.py usr/share/hhsuite/scripts/hh_reader.py usr/share/hhsuite/scripts/hhmakemodel.pl usr/share/hhsuite/scripts/hhmakemodel.py usr/share/hhsuite/scripts/hhsuitedb.py usr/share/hhsuite/scripts/mergeali.pl usr/share/hhsuite/scripts/multithread.pl usr/share/hhsuite/scripts/pdb2fasta.pl usr/share/hhsuite/scripts/pdbfilter.pl usr/share/hhsuite/scripts/pdbfilter.py usr/share/hhsuite/scripts/reformat.pl usr/share/hhsuite/scripts/renumberpdb.pl usr/share/hhsuite/scripts/splitfasta.pl usr/share/man usr/share/man/man1 usr/share/man/man1/hhalign.1.gz usr/share/man/man1/hhblits.1.gz usr/share/man/man1/hhblits_omp.1.gz usr/share/man/man1/hhconsensus.1.gz usr/share/man/man1/hhfilter.1.gz usr/share/man/man1/hhmake.1.gz usr/share/man/man1/hhsearch.1.gz usr/bin/a3m_database_extract usr/bin/a3m_database_filter usr/bin/a3m_database_reduce usr/bin/a3m_extract usr/bin/a3m_reduce usr/bin/hhalign usr/bin/hhalign_omp usr/bin/hhblits usr/bin/hhblits_ca3m usr/bin/hhblits_omp usr/bin/hhconsensus usr/bin/hhfilter usr/bin/hhmake usr/bin/hhsearch usr/bin/hhsearch_omp usr/lib/hh usr/lib/hhsuite/scripts usr/libexec/hhsuite/bin/cstranslate